RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 ACOT2P49753 483 aa12.49□□□□□ -0.41
SNX1-204ENST00000559061 KCNT2Q6UVM3 1135 aa12.49□□□□□ -0.41
SNX1-204ENST00000559061 RNF168Q8IYW5 571 aaPredicted RBP12.49□□□□□ -0.41
SNX1-204ENST00000559061 ABI1Q8IZP0 508 aa12.49□□□□□ -0.41
SNX1-204ENST00000559061 SPPL3Q8TCT6 385 aa12.49□□□□□ -0.41
SNX1-204ENST00000559061 SAAL1Q96ER3 474 aa12.49□□□□□ -0.41
SNX1-204ENST00000559061 MSTO1Q9BUK6 570 aa12.49□□□□□ -0.41
SNX1-204ENST00000559061 MRPL9Q9BYD2 267 aaKnown RBP12.49□□□□□ -0.41
SNX1-204ENST00000559061 GOLGA2P5Q9HBQ8 144 aa12.49□□□□□ -0.41
SNX1-204ENST00000559061 ALG13Q9NP73 1137 aaKnown RBP12.49□□□□□ -0.41
SNX1-204ENST00000559061 UBN1Q9NPG3 1134 aa12.49□□□□□ -0.41
SNX1-204ENST00000559061 AGPAT3Q9NRZ7 376 aa12.49□□□□□ -0.41
SNX1-204ENST00000559061 EXOC1Q9NV70 894 aa12.49□□□□□ -0.41
SNX1-204ENST00000559061 MAN1B1Q9UKM7 699 aa12.49□□□□□ -0.41
SNX1-204ENST00000559061 PCDHB13Q9Y5F0 798 aa12.49□□□□□ -0.41
SNX1-204ENST00000559061 MTCH2Q9Y6C9 303 aa12.49□□□□□ -0.41
SNX1-204ENST00000559061 SMIM28A0A1B0GU29 152 aa12.48□□□□□ -0.41
SNX1-204ENST00000559061 ZC3H11AO75152 810 aaKnown RBP eCLIP12.48□□□□□ -0.41
SNX1-204ENST00000559061 KCNE1P15382 129 aa12.48□□□□□ -0.41
SNX1-204ENST00000559061 CD44P16070 742 aaKnown RBP12.48□□□□□ -0.41
SNX1-204ENST00000559061 LAG3P18627 525 aa12.48□□□□□ -0.41
SNX1-204ENST00000559061 POU3F3P20264 500 aaPredicted RBP12.48□□□□□ -0.41
SNX1-204ENST00000559061 IRS1P35568 1242 aa12.48□□□□□ -0.41
SNX1-204ENST00000559061 SPAG1Q07617 926 aa12.48□□□□□ -0.41
SNX1-204ENST00000559061 GRIK3Q13003 919 aa12.48□□□□□ -0.41
SNX1-204ENST00000559061 ZBTB6Q15916 424 aa12.48□□□□□ -0.41
SNX1-204ENST00000559061 ZCWPW2Q504Y3 356 aa12.48□□□□□ -0.41
SNX1-204ENST00000559061 POTEHQ6S545 545 aa12.48□□□□□ -0.41
SNX1-204ENST00000559061 C3orf58Q8NDZ4 430 aa12.48□□□□□ -0.41
SNX1-204ENST00000559061 P2RX5Q93086 422 aa12.48□□□□□ -0.41
SNX1-204ENST00000559061 C18orf25Q96B23 403 aaPredicted RBP12.48□□□□□ -0.41
SNX1-204ENST00000559061 FBXL18Q96ME1 805 aa12.48□□□□□ -0.41
SNX1-204ENST00000559061 SAMD11Q96NU1 681 aa12.48□□□□□ -0.41
SNX1-204ENST00000559061 TCHPQ9BT92 498 aa12.48□□□□□ -0.41
SNX1-204ENST00000559061 PLVAPQ9BX97 442 aa12.48□□□□□ -0.41
SNX1-204ENST00000559061 GBP3Q9H0R5 595 aa12.48□□□□□ -0.41
SNX1-204ENST00000559061 TUBGCP4Q9UGJ1 667 aa12.48□□□□□ -0.41
SNX1-204ENST00000559061 AGO2Q9UKV8 859 aaKnown RBP12.48□□□□□ -0.41
SNX1-204ENST00000559061 SCN1AP35498 2009 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 PTPRJQ12913 1337 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 GOLGA8IPA6NC78 632 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 CASTOR2A6NHX0 329 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 GOLGA8JA6NMD2 632 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 LACTBL1A8MY62 500 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 NRP1O14786 923 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 FSCN2O14926 492 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 FGF18O76093 207 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 RB1P06400 928 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 NFICP08651 508 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 CLTAP09496 248 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 GARTP22102 1010 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 ABCD1P33897 745 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 GUCY2FP51841 1108 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 PLCB3Q01970 1234 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 PSMD2Q13200 908 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 GPM6BQ13491 265 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 KNOP1Q1ED39 458 aaKnown RBP12.47□□□□□ -0.41
SNX1-204ENST00000559061 KANK3Q6NY19 840 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 CBWD2Q8IUF1 395 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 C12orf56Q8IXR9 622 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 EFCAB13Q8IY85 973 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 URGCPQ8TCY9 931 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 PLEKHO2Q8TD55 490 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 RSPH1Q8WYR4 309 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 POMGNT1Q8WZA1 660 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 IGSF21Q96ID5 467 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 ZNF558Q96NG5 402 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 ACAP3Q96P50 834 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 TMEM175Q9BSA9 504 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 CCDC94Q9BW85 323 aaPredicted RBP12.47□□□□□ -0.41
SNX1-204ENST00000559061 PCIF1Q9H4Z3 704 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 TMEM206Q9H813 350 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 DMAC2Q9NW81 257 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 MAPK8IP1Q9UQF2 711 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 XIRP2A4UGR9 3374 aa12.47□□□□□ -0.41
SNX1-204ENST00000559061 PPEF2O14830 753 aa12.46□□□□□ -0.41
SNX1-204ENST00000559061 CLIC2O15247 247 aa12.46□□□□□ -0.41
SNX1-204ENST00000559061 KINO60870 393 aaKnown RBP12.46□□□□□ -0.41
SNX1-204ENST00000559061 KIF4AO95239 1232 aa12.46□□□□□ -0.41
SNX1-204ENST00000559061 PRCPP42785 496 aa12.46□□□□□ -0.41
SNX1-204ENST00000559061 PMS1P54277 932 aaKnown RBP12.46□□□□□ -0.41
SNX1-204ENST00000559061 ERVFC1P60507 584 aa12.46□□□□□ -0.41
SNX1-204ENST00000559061 TUSC3Q13454 348 aa12.46□□□□□ -0.41
SNX1-204ENST00000559061 MORC3Q14149 939 aa12.46□□□□□ -0.41
SNX1-204ENST00000559061 CAMK4Q16566 473 aa12.46□□□□□ -0.41
SNX1-204ENST00000559061 TAS1R1Q7RTX1 841 aa12.46□□□□□ -0.41
SNX1-204ENST00000559061 ADGRD2Q7Z7M1 963 aa12.46□□□□□ -0.41
SNX1-204ENST00000559061 BRSK2Q8IWQ3 736 aa12.46□□□□□ -0.41
SNX1-204ENST00000559061 HACE1Q8IYU2 909 aa12.46□□□□□ -0.41
SNX1-204ENST00000559061 CXorf38Q8TB03 319 aa12.46□□□□□ -0.41
SNX1-204ENST00000559061 TMEM174Q8WUU8 243 aa12.46□□□□□ -0.41
SNX1-204ENST00000559061 POF1BQ8WVV4 589 aa12.46□□□□□ -0.41
SNX1-204ENST00000559061 GSDMAQ96QA5 445 aa12.46□□□□□ -0.41
SNX1-204ENST00000559061 FAM213AQ9BRX8 229 aa12.46□□□□□ -0.41
SNX1-204ENST00000559061 C11orf84Q9BUA3 381 aaPredicted RBP12.46□□□□□ -0.41
SNX1-204ENST00000559061 CLSTN2Q9H4D0 955 aa12.46□□□□□ -0.41
SNX1-204ENST00000559061 HSPBP1Q9NZL4 362 aa12.46□□□□□ -0.41
SNX1-204ENST00000559061 KANSL3Q9P2N6 904 aa12.46□□□□□ -0.41
SNX1-204ENST00000559061 EXOC7Q9UPT5 735 aa12.46□□□□□ -0.41
SNX1-204ENST00000559061 PRG3Q9Y2Y8 225 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms