RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 CLDN3O15551 220 aa12.97□□□□□ -0.33
SEC11A-206ENST00000558924 PSMD10O75832 226 aa12.97□□□□□ -0.33
SEC11A-206ENST00000558924 CD58P19256 250 aa12.97□□□□□ -0.33
SEC11A-206ENST00000558924 DMP1Q13316 513 aaPredicted RBP12.97□□□□□ -0.33
SEC11A-206ENST00000558924 TMED2Q15363 201 aa12.97□□□□□ -0.33
SEC11A-206ENST00000558924 CIAPIN1Q6FI81 312 aa12.97□□□□□ -0.33
SEC11A-206ENST00000558924 ZBTB33Q86T24 672 aa12.97□□□□□ -0.33
SEC11A-206ENST00000558924 JAMLQ86YT9 394 aa12.97□□□□□ -0.33
SEC11A-206ENST00000558924 XXYLT1Q8NBI6 393 aa12.97□□□□□ -0.33
SEC11A-206ENST00000558924 LNX1Q8TBB1 728 aaPredicted RBP12.97□□□□□ -0.33
SEC11A-206ENST00000558924 ECT2Q9H8V3 914 aa12.97□□□□□ -0.33
SEC11A-206ENST00000558924 TRAF3IP3Q9Y228 551 aa12.97□□□□□ -0.33
SEC11A-206ENST00000558924 ALG6Q9Y672 507 aa12.97□□□□□ -0.33
SEC11A-206ENST00000558924 BZW2Q9Y6E2 419 aaKnown RBP12.97□□□□□ -0.33
SEC11A-206ENST00000558924 SCN7AQ01118 1682 aa12.97□□□□□ -0.33
SEC11A-206ENST00000558924 NAV1Q8NEY1 1877 aa12.97□□□□□ -0.33
SEC11A-206ENST00000558924 IGLV3-22A0A075B6J6 115 aa12.96□□□□□ -0.33
SEC11A-206ENST00000558924 P4HBP07237 508 aaKnown RBP12.96□□□□□ -0.33
SEC11A-206ENST00000558924 HNRNPH3P31942 346 aaKnown RBP12.96□□□□□ -0.33
SEC11A-206ENST00000558924 SLC8A3P57103 927 aa12.96□□□□□ -0.33
SEC11A-206ENST00000558924 TRAF1Q13077 416 aa12.96□□□□□ -0.33
SEC11A-206ENST00000558924 TBC1D25Q3MII6 688 aa12.96□□□□□ -0.33
SEC11A-206ENST00000558924 SLC47A2Q86VL8 602 aa12.96□□□□□ -0.33
SEC11A-206ENST00000558924 UBL4BQ8N7F7 174 aa12.96□□□□□ -0.33
SEC11A-206ENST00000558924 ACCSQ96QU6 501 aa12.96□□□□□ -0.33
SEC11A-206ENST00000558924 FAM114A2Q9NRY5 505 aa12.96□□□□□ -0.33
SEC11A-206ENST00000558924 PNMA3Q9UL41 463 aa12.96□□□□□ -0.33
SEC11A-206ENST00000558924 TELO2Q9Y4R8 837 aa12.96□□□□□ -0.33
SEC11A-206ENST00000558924 TCRBV7S2A1N4TA0A589 114 aa12.96□□□□□ -0.33
SEC11A-206ENST00000558924 IGF2BP3O00425 579 aaKnown RBP eCLIP12.96□□□□□ -0.33
SEC11A-206ENST00000558924 TBX3O15119 743 aa12.96□□□□□ -0.33
SEC11A-206ENST00000558924 RGL2O15211 777 aa12.96□□□□□ -0.33
SEC11A-206ENST00000558924 HSPA9P38646 679 aaKnown RBP12.96□□□□□ -0.33
SEC11A-206ENST00000558924 CCDC6Q16204 474 aa12.96□□□□□ -0.33
SEC11A-206ENST00000558924 INTS8Q75QN2 995 aaKnown RBP12.96□□□□□ -0.33
SEC11A-206ENST00000558924 GMCL1P1Q8NEA9 526 aa12.96□□□□□ -0.33
SEC11A-206ENST00000558924 CPA5Q8WXQ8 436 aa12.96□□□□□ -0.33
SEC11A-206ENST00000558924 AIPL1Q9NZN9 384 aa12.96□□□□□ -0.33
SEC11A-206ENST00000558924 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.96□□□□□ -0.33
SEC11A-206ENST00000558924 MYO3BQ8WXR4 1341 aa12.96□□□□□ -0.33
SEC11A-206ENST00000558924 DPPA5A6NC42 116 aa12.96□□□□□ -0.34
SEC11A-206ENST00000558924 SMIM24O75264 130 aa12.96□□□□□ -0.34
SEC11A-206ENST00000558924 LMNB1P20700 586 aa12.96□□□□□ -0.34
SEC11A-206ENST00000558924 ASTE1Q2TB18 679 aaPredicted RBP12.96□□□□□ -0.34
SEC11A-206ENST00000558924 SPOPLQ6IQ16 392 aa12.96□□□□□ -0.34
SEC11A-206ENST00000558924 POLR3CQ9BUI4 534 aaPredicted RBP12.96□□□□□ -0.34
SEC11A-206ENST00000558924 EBF2Q9HAK2 575 aa12.96□□□□□ -0.34
SEC11A-206ENST00000558924 NKIRAS1Q9NYS0 192 aa12.96□□□□□ -0.34
SEC11A-206ENST00000558924 CCT8L1PA6NM43 557 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 CYP3A4P08684 503 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 CTCFP49711 727 aaPredicted RBP12.95□□□□□ -0.34
SEC11A-206ENST00000558924 ALDH5A1P51649 535 aaPredicted RBP12.95□□□□□ -0.34
SEC11A-206ENST00000558924 TKFCQ3LXA3 575 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 ANKRD35Q8N283 1001 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 MTUS1Q9ULD2 1270 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 ZMYND8Q9ULU4 1186 aaPredicted RBP12.95□□□□□ -0.34
SEC11A-206ENST00000558924 RIPK3Q9Y572 518 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 ATF7P17544 494 aaPredicted RBP12.95□□□□□ -0.34
SEC11A-206ENST00000558924 LIG4P49917 911 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 SGO2Q562F6 1265 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 SCARA5Q6ZMJ2 495 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 ALG3Q92685 438 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 EDEM3Q9BZQ6 932 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 ETNK1Q9HBU6 452 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 DCTN4Q9UJW0 460 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 CYP3A7-CYP3A51PA0A087WV96 503 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 ANKRD63C9JTQ0 380 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 GOLGA8RI6L899 631 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 GJB6O95452 261 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 BRAFP15056 766 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 CYP3A7P24462 503 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 LACTBP83111 547 aaPredicted RBP12.95□□□□□ -0.34
SEC11A-206ENST00000558924 MICALL2Q8IY33 904 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 OSBPL1AQ9BXW6 950 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 VPS37BQ9H9H4 285 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 TUFT1Q9NNX1 390 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 MYOZ2Q9NPC6 264 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 FEM1BQ9UK73 627 aa12.95□□□□□ -0.34
SEC11A-206ENST00000558924 CENPFP49454 3210 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 DDX60LQ5H9U9 1706 aaKnown RBP12.94□□□□□ -0.34
SEC11A-206ENST00000558924 TMEM120BA0PK00 339 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 GH1P01241 217 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 COMTP21964 271 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 POLGP54098 1239 aaPredicted RBP12.94□□□□□ -0.34
SEC11A-206ENST00000558924 ZBTB16Q05516 673 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 TRPM8Q7Z2W7 1104 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 ZNF513Q8N8E2 541 aaPredicted RBP12.94□□□□□ -0.34
SEC11A-206ENST00000558924 KLF6Q99612 283 aaPredicted RBP12.94□□□□□ -0.34
SEC11A-206ENST00000558924 AGPAT1Q99943 283 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 ERP44Q9BS26 406 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 STK33Q9BYT3 514 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 PCDHGC5Q9Y5F6 944 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 LAMB2P55268 1798 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 PJA2O43164 708 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 SRGAP2CP0DJJ0 459 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 DRD4P21917 467 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 RARRES1P49788 294 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 IGBP1P78318 339 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 SNRNP35Q16560 246 aaKnown RBP12.94□□□□□ -0.34
SEC11A-206ENST00000558924 TAS1R2Q8TE23 839 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms