RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 ZNF646O15015 1829 aaPredicted RBP7.27□□□□□ -1.25
LRRC28-209ENST00000558861 ZNF541Q9H0D2 1346 aa7.27□□□□□ -1.25
LRRC28-209ENST00000558861 PEX10O60683 326 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 HMMRO75330 724 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 ULK1O75385 1050 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 CYP17A1P05093 508 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 CENPBP07199 599 aaPredicted RBP7.26□□□□□ -1.25
LRRC28-209ENST00000558861 IL1R1P14778 569 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 ADORA1P30542 326 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 MC4RP32245 332 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 EPHB3P54753 998 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 TIMM10P62072 90 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 CXCL9Q07325 125 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 DBPQ10586 325 aaPredicted RBP7.26□□□□□ -1.25
LRRC28-209ENST00000558861 ATP2B3Q16720 1220 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 CD300LDQ6UXZ3 194 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 LDHDQ86WU2 507 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 PROSER1Q86XN7 944 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 PASD1Q8IV76 773 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 CNTD1Q8N815 330 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 TDRD7Q8NHU6 1098 aaKnown RBP7.26□□□□□ -1.25
LRRC28-209ENST00000558861 CPA5Q8WXQ8 436 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 LPIN2Q92539 896 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 ERCC4Q92889 916 aaPredicted RBP7.26□□□□□ -1.25
LRRC28-209ENST00000558861 EAF2Q96CJ1 260 aaPredicted RBP7.26□□□□□ -1.25
LRRC28-209ENST00000558861 C16orf92Q96LL3 132 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 GBP4Q96PP9 640 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 CCDC8Q9H0W5 538 aaPredicted RBP7.26□□□□□ -1.25
LRRC28-209ENST00000558861 CD209Q9NNX6 404 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 BTBD7Q9P203 1132 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 WASF3Q9UPY6 502 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 FPGT-TNNI3KV9GXZ4 949 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 SALL3Q9BXA9 1300 aa7.26□□□□□ -1.25
LRRC28-209ENST00000558861 ARAP2Q8WZ64 1704 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.25□□□□□ -1.25
LRRC28-209ENST00000558861 A0A1B0GUL7 405 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 ECE2O60344 883 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 NCAM1P13591 858 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 ATF2P15336 505 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 YY1P25490 414 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 AOAHP28039 575 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 GYG1P46976 350 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 FNTBP49356 437 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 HERVK_113P62684 666 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 PHC1P78364 1004 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 CACNB2Q08289 660 aaPredicted RBP7.25□□□□□ -1.25
LRRC28-209ENST00000558861 ITKQ08881 620 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 G3BP1Q13283 466 aaKnown RBP eCLIP7.25□□□□□ -1.25
LRRC28-209ENST00000558861 DACT2Q5SW24 774 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 LIPIQ6XZB0 460 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 ZC3H18Q86VM9 953 aaKnown RBP7.25□□□□□ -1.25
LRRC28-209ENST00000558861 CERS5Q8N5B7 392 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 DDX11Q96FC9 970 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 SCYL1Q96KG9 808 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 EYA3Q99504 573 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 ASPSCR1Q9BZE9 553 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 COA1Q9GZY4 146 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 RNF38Q9H0F5 515 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 PUS7LQ9H0K6 701 aaKnown RBP7.25□□□□□ -1.25
LRRC28-209ENST00000558861 DBNDD1Q9H9R9 158 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 SLC39A2Q9NP94 309 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 FAM53CQ9NYF3 392 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 DBNLQ9UJU6 430 aaKnown RBP7.25□□□□□ -1.25
LRRC28-209ENST00000558861 FAM205AQ6ZU69 1335 aa7.25□□□□□ -1.25
LRRC28-209ENST00000558861 TIAM2Q8IVF5 1701 aa7.24□□□□□ -1.25
LRRC28-209ENST00000558861 TEX51A0A1B0GUA7 166 aa7.24□□□□□ -1.25
LRRC28-209ENST00000558861 HMGB1P09429 215 aaKnown RBP7.24□□□□□ -1.25
LRRC28-209ENST00000558861 PHKA1P46020 1223 aa7.24□□□□□ -1.25
LRRC28-209ENST00000558861 SESN3P58005 492 aa7.24□□□□□ -1.25
LRRC28-209ENST00000558861 NKX3-2P78367 333 aa7.24□□□□□ -1.25
LRRC28-209ENST00000558861 EXOSC10Q01780 885 aaKnown RBP7.24□□□□□ -1.25
LRRC28-209ENST00000558861 TMC5Q6UXY8 1006 aa7.24□□□□□ -1.25
LRRC28-209ENST00000558861 RTN4RL1Q86UN2 441 aaPredicted RBP7.24□□□□□ -1.25
LRRC28-209ENST00000558861 ERC1Q8IUD2 1116 aa7.24□□□□□ -1.25
LRRC28-209ENST00000558861 CILP2Q8IUL8 1156 aa7.24□□□□□ -1.25
LRRC28-209ENST00000558861 IGDCC3Q8IVU1 814 aa7.24□□□□□ -1.25
LRRC28-209ENST00000558861 ZNF610Q8N9Z0 462 aa7.24□□□□□ -1.25
LRRC28-209ENST00000558861 HIPK4Q8NE63 616 aa7.24□□□□□ -1.25
LRRC28-209ENST00000558861 SMARCC2Q8TAQ2 1214 aa7.24□□□□□ -1.25
LRRC28-209ENST00000558861 MZB1Q8WU39 189 aa7.24□□□□□ -1.25
LRRC28-209ENST00000558861 KIF1BPQ96EK5 621 aa7.24□□□□□ -1.25
LRRC28-209ENST00000558861 SMAD5Q99717 465 aaKnown RBP7.24□□□□□ -1.25
LRRC28-209ENST00000558861 IRF2BPLQ9H1B7 796 aa7.24□□□□□ -1.25
LRRC28-209ENST00000558861 TMX4Q9H1E5 349 aaPredicted RBP7.24□□□□□ -1.25
LRRC28-209ENST00000558861 GCM1Q9NP62 436 aa7.24□□□□□ -1.25
LRRC28-209ENST00000558861 TOPORSQ9NS56 1045 aaPredicted RBP7.24□□□□□ -1.25
LRRC28-209ENST00000558861 ARHGAP28Q9P2N2 729 aa7.24□□□□□ -1.25
LRRC28-209ENST00000558861 TRHDEQ9UKU6 1024 aa7.24□□□□□ -1.25
LRRC28-209ENST00000558861 PCNTO95613 3336 aa7.24□□□□□ -1.25
LRRC28-209ENST00000558861 PDS5AQ29RF7 1337 aaKnown RBP7.24□□□□□ -1.25
LRRC28-209ENST00000558861 CCDC88AQ3V6T2 1871 aa7.24□□□□□ -1.25
LRRC28-209ENST00000558861 PSME4Q14997 1843 aa7.23□□□□□ -1.25
LRRC28-209ENST00000558861 GLTPD2A6NH11 291 aa7.23□□□□□ -1.25
LRRC28-209ENST00000558861 PSMD14O00487 310 aa7.23□□□□□ -1.25
LRRC28-209ENST00000558861 RAD17O75943 681 aa7.23□□□□□ -1.25
LRRC28-209ENST00000558861 DDNO94850 711 aaPredicted RBP7.23□□□□□ -1.25
LRRC28-209ENST00000558861 IFIT1P09914 478 aaKnown RBP7.23□□□□□ -1.25
LRRC28-209ENST00000558861 CYP2C8P10632 490 aa7.23□□□□□ -1.25
LRRC28-209ENST00000558861 SLC5A1P13866 664 aa7.23□□□□□ -1.25
LRRC28-209ENST00000558861 HIBADHP31937 336 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms