RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 HERC2P3Q9BVR0 1158 aa12.05□□□□□ -0.48
PBX1-213ENST00000558796 HAPLN2Q9GZV7 340 aa12.05□□□□□ -0.48
PBX1-213ENST00000558796 TOPORSQ9NS56 1045 aaPredicted RBP12.05□□□□□ -0.48
PBX1-213ENST00000558796 TBC1D7Q9P0N9 293 aa12.05□□□□□ -0.48
PBX1-213ENST00000558796 CLEC1BQ9P126 229 aa12.05□□□□□ -0.48
PBX1-213ENST00000558796 CD207Q9UJ71 328 aa12.05□□□□□ -0.48
PBX1-213ENST00000558796 CFAP45Q9UL16 551 aa12.05□□□□□ -0.48
PBX1-213ENST00000558796 TBX20Q9UMR3 447 aa12.05□□□□□ -0.48
PBX1-213ENST00000558796 TRIOO75962 3097 aa12.05□□□□□ -0.48
PBX1-213ENST00000558796 CLDN3O15551 220 aa12.04□□□□□ -0.48
PBX1-213ENST00000558796 MEFVO15553 781 aaPredicted RBP12.04□□□□□ -0.48
PBX1-213ENST00000558796 CLASP2O75122 1294 aaKnown RBP12.04□□□□□ -0.48
PBX1-213ENST00000558796 SOD2P04179 222 aa12.04□□□□□ -0.48
PBX1-213ENST00000558796 URODP06132 367 aa12.04□□□□□ -0.48
PBX1-213ENST00000558796 MCL1Q07820 350 aa12.04□□□□□ -0.48
PBX1-213ENST00000558796 HSP90AA2PQ14568 343 aaPredicted RBP12.04□□□□□ -0.48
PBX1-213ENST00000558796 BMS1Q14692 1282 aaKnown RBP12.04□□□□□ -0.48
PBX1-213ENST00000558796 MAP4K3Q8IVH8 894 aa12.04□□□□□ -0.48
PBX1-213ENST00000558796 MSLNLQ96KJ4 702 aa12.04□□□□□ -0.48
PBX1-213ENST00000558796 PPP1R10Q96QC0 940 aaKnown RBP12.04□□□□□ -0.48
PBX1-213ENST00000558796 COLEC11Q9BWP8 271 aa12.04□□□□□ -0.48
PBX1-213ENST00000558796 APOL5Q9BWW9 433 aa12.04□□□□□ -0.48
PBX1-213ENST00000558796 IKZF4Q9H2S9 585 aa12.04□□□□□ -0.48
PBX1-213ENST00000558796 MRPL44Q9H9J2 332 aaKnown RBP12.04□□□□□ -0.48
PBX1-213ENST00000558796 GOLGA2P5Q9HBQ8 144 aa12.04□□□□□ -0.48
PBX1-213ENST00000558796 ADAM28Q9UKQ2 775 aa12.04□□□□□ -0.48
PBX1-213ENST00000558796 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.03□□□□□ -0.48
PBX1-213ENST00000558796 SMIM28A0A1B0GU29 152 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 FSD2A1L4K1 749 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 GRXCR2A6NFK2 248 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 TISP43B9A030 160 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 MBTPS2O43462 519 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 SRGAP2BP0DMP2 458 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 CXCL8P10145 99 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 GAP43P17677 238 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 TNFSF9P41273 254 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 GLUD2P49448 558 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 KRT85P78386 507 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 GTF2BQ00403 316 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 SOX4Q06945 474 aaPredicted RBP12.03□□□□□ -0.48
PBX1-213ENST00000558796 SMAD4Q13485 552 aaKnown RBP12.03□□□□□ -0.48
PBX1-213ENST00000558796 TPRNQ4KMQ1 711 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 ZBTB41Q5SVQ8 909 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 RESP18Q5W5W9 173 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 FUT10Q6P4F1 479 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 SLC39A4Q6P5W5 647 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 RNF168Q8IYW5 571 aaPredicted RBP12.03□□□□□ -0.48
PBX1-213ENST00000558796 TMEM87AQ8NBN3 555 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 LEO1Q8WVC0 666 aaPredicted RBP12.03□□□□□ -0.48
PBX1-213ENST00000558796 KCNN1Q92952 543 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 SPATA32Q96LK8 384 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 ZMAT2Q96NC0 199 aaKnown RBP12.03□□□□□ -0.48
PBX1-213ENST00000558796 ACAP3Q96P50 834 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 FGFBP2Q9BYJ0 223 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 GPR62Q9BZJ7 368 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 TNMDQ9H2S6 317 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 MRPL17Q9NRX2 175 aaKnown RBP12.03□□□□□ -0.48
PBX1-213ENST00000558796 FAM13BQ9NYF5 915 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 RCOR1Q9UKL0 485 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 HCFC2Q9Y5Z7 792 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 IRAK3Q9Y616 596 aa12.03□□□□□ -0.48
PBX1-213ENST00000558796 SF3B1O75533 1304 aaKnown RBP eCLIP12.03□□□□□ -0.48
PBX1-213ENST00000558796 FRMD3A2A2Y4 597 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 ANKRD63C9JTQ0 380 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 POLR2DO15514 142 aaKnown RBP12.02□□□□□ -0.49
PBX1-213ENST00000558796 TADA2AO75478 443 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 PPP1R37O75864 691 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 GCNT3O95395 438 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 EFEMP2O95967 443 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 PIGRP01833 764 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 CNPP09543 421 aaKnown RBP12.02□□□□□ -0.49
PBX1-213ENST00000558796 MYBP10242 640 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 EPCAMP16422 314 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 SCP2P22307 547 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 CLCNKBP51801 687 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 CASP5P51878 434 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 ASIC1P78348 528 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 KCNA1Q09470 495 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 COASYQ13057 564 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 KCNC3Q14003 757 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 PUS10Q3MIT2 529 aaKnown RBP12.02□□□□□ -0.49
PBX1-213ENST00000558796 HERC4Q5GLZ8 1057 aaPredicted RBP12.02□□□□□ -0.49
PBX1-213ENST00000558796 ANKRD54Q6NXT1 300 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 ALKAL1Q6UXT8 129 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 TMEM130Q8N3G9 435 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 IQUBQ8NA54 791 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 SMRP1Q8NCR6 262 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 C18orf25Q96B23 403 aaPredicted RBP12.02□□□□□ -0.49
PBX1-213ENST00000558796 MSTO1Q9BUK6 570 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 CUEDC2Q9H467 287 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 ST6GALNAC4Q9H4F1 302 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 PANK4Q9NVE7 773 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 KBTBD4Q9NVX7 518 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 CNTN3Q9P232 1028 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 SEL1LQ9UBV2 794 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 STK39Q9UEW8 545 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 MYO10Q9HD67 2058 aa12.02□□□□□ -0.49
PBX1-213ENST00000558796 TNFRSF10AO00220 468 aa12.01□□□□□ -0.49
PBX1-213ENST00000558796 OGTO15294 1046 aa12.01□□□□□ -0.49
PBX1-213ENST00000558796 FAM189A1O60320 539 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms