RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 LRRC2Q9BYS8 371 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 UNC45AQ9H3U1 944 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 RWDD1Q9H446 243 aaPredicted RBP7.55□□□□□ -1.2
LRRC28-207ENST00000558500 LMAN1LQ9HAT1 526 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 GDE1Q9NZC3 331 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 DNMT3BQ9UBC3 853 aaKnown RBP7.55□□□□□ -1.2
LRRC28-207ENST00000558500 COL4A3BPQ9Y5P4 624 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 RBM8AQ9Y5S9 174 aaKnown RBP7.55□□□□□ -1.2
LRRC28-207ENST00000558500 EVPLQ92817 2033 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 ESYT2A0FGR8 921 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 DDX11L8A8MPP1 907 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 GAS7O60861 476 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 TADA2AO75478 443 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 PAPSS2O95340 614 aaPredicted RBP7.54□□□□□ -1.2
LRRC28-207ENST00000558500 GSPT1P15170 499 aaKnown RBP7.54□□□□□ -1.2
LRRC28-207ENST00000558500 GAS6Q14393 721 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 SF3A2Q15428 464 aaKnown RBP7.54□□□□□ -1.2
LRRC28-207ENST00000558500 RTN1Q16799 776 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 UVSSAQ2YD98 709 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 LRCH2Q5VUJ6 765 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 APOA5Q6Q788 366 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 SYNE3Q6ZMZ3 975 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 ANO5Q75V66 913 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 MIER3Q7Z3K6 550 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 REXO1Q8N1G1 1221 aaKnown RBP7.54□□□□□ -1.2
LRRC28-207ENST00000558500 SPEM1Q8N4L4 309 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 FAM160A2Q8N612 972 aaPredicted RBP7.54□□□□□ -1.2
LRRC28-207ENST00000558500 C12orf50Q8NA57 414 aaPredicted RBP7.54□□□□□ -1.2
LRRC28-207ENST00000558500 GSTCDQ8NEC7 633 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 RDM1Q8NG50 284 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 LNX1Q8TBB1 728 aaPredicted RBP7.54□□□□□ -1.2
LRRC28-207ENST00000558500 SLC7A14Q8TBB6 771 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 PRPF31Q8WWY3 499 aaKnown RBP7.54□□□□□ -1.2
LRRC28-207ENST00000558500 PIK3R5Q8WYR1 880 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 FAM3CQ92520 227 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 RABGGTAQ92696 567 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 ELSPBP1Q96BH3 223 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 MCRS1Q96EZ8 462 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 TTPALQ9BTX7 342 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 TEKT3Q9BXF9 490 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 ZMYND12Q9H0C1 365 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 BRD9Q9H8M2 597 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 C6orf50Q9HD87 102 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 RXFP3Q9NSD7 469 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 HCFC1R1Q9NWW0 138 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 GIT1Q9Y2X7 761 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 MRPS23Q9Y3D9 190 aaKnown RBP7.54□□□□□ -1.2
LRRC28-207ENST00000558500 HES2Q9Y543 173 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 PATJQ8NI35 1801 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 GCN1Q92616 2671 aaKnown RBP7.54□□□□□ -1.2
LRRC28-207ENST00000558500 F5P12259 2224 aa7.54□□□□□ -1.2
LRRC28-207ENST00000558500 SF3B1O75533 1304 aaKnown RBP eCLIP7.53□□□□□ -1.2
LRRC28-207ENST00000558500 SPEGQ15772 3267 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 K7ESF4 209 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 ADAM12O43184 909 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 EDIL3O43854 480 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 TSPAN1O60635 241 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 PSMD10O75832 226 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 IGHDP01880 384 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 ZNF806P0C7X5 589 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 SRGAP2CP0DJJ0 459 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 CHRNB1P11230 501 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 FCARP24071 287 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 AXLP30530 894 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 LAMTOR4Q0VGL1 99 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 GRM2Q14416 872 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 HSP90AA2PQ14568 343 aaPredicted RBP7.53□□□□□ -1.2
LRRC28-207ENST00000558500 PSMD5Q16401 504 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 PFKFB3Q16875 520 aaPredicted RBP7.53□□□□□ -1.2
LRRC28-207ENST00000558500 SLC5A9Q2M3M2 681 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 AXDND1Q5T1B0 1012 aaPredicted RBP7.53□□□□□ -1.2
LRRC28-207ENST00000558500 STPG1Q5TH74 334 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 NOTUMQ6P988 496 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 LRSAM1Q6UWE0 723 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 B3GNT9Q6UX72 402 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 CEP68Q76N32 757 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 RTL10Q7L3V2 364 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 SLC7A3Q8WY07 619 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 IRF7Q92985 503 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 GJA10Q969M2 543 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 CCDC51Q96ER9 411 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 CCDC136Q96JN2 1154 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 TRMT61BQ9BVS5 477 aaKnown RBP7.53□□□□□ -1.2
LRRC28-207ENST00000558500 APOL6Q9BWW8 343 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 LSM14BQ9BX40 385 aaKnown RBP7.53□□□□□ -1.2
LRRC28-207ENST00000558500 CSRNP2Q9H175 543 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 ARRDC1-AS1Q9H2J1 176 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 TRPV5Q9NQA5 729 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 AVENQ9NQS1 362 aaPredicted RBP7.53□□□□□ -1.2
LRRC28-207ENST00000558500 PIAS3Q9Y6X2 628 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 ASPMQ8IZT6 3477 aa7.53□□□□□ -1.2
LRRC28-207ENST00000558500 TMEM8BA6NDV4 472 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 SRRM3A6NNA2 597 aaPredicted RBP7.52□□□□□ -1.21
LRRC28-207ENST00000558500 AXIN1O15169 862 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 ZBTB43O43298 467 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 ERLIN2O94905 339 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 RHOP08100 348 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 CEBPBP17676 345 aa7.52□□□□□ -1.21
LRRC28-207ENST00000558500 AKAP5P24588 427 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms