RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 JDP2Q8WYK2 163 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 E2F7Q96AV8 911 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 TMA16Q96EY4 203 aaKnown RBP12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 BBS2Q9BXC9 721 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 ANKZF1Q9H8Y5 726 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 FANCEQ9HB96 536 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 MBD2Q9UBB5 411 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 ADD2P35612 726 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 SOX5P35711 763 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 USP11P51784 963 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 KBTBD12Q3ZCT8 623 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 C1orf54Q8WWF1 131 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 SEPT1Q8WYJ6 367 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 SYN2Q92777 582 aaPredicted RBP12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 QKIQ96PU8 341 aaKnown RBP eCLIP12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 ZNF184Q99676 751 aaPredicted RBP12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 BFARQ9NZS9 450 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 LAMC1P11047 1609 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 KIF1BO60333 1816 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 PMLP29590 882 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 ERFP50548 548 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 DNAJC3Q13217 504 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 ATP1A4Q13733 1029 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 EFHC1Q5JVL4 640 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 PLEKHM3Q6ZWE6 761 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 MAGEC3Q8TD91 643 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 AIFM3Q96NN9 605 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 RUBCNLQ9H714 662 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 PLGRKTQ9HBL7 147 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 HEY2Q9UBP5 337 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 R3HDM2Q9Y2K5 976 aaKnown RBP12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 ATP10DQ9P241 1426 aa12.39□□□□□ -0.43
CSPG4P12-201ENST00000558282 F8W8V4 182 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 AIM2O14862 343 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 STX5Q13190 355 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 LRRC74BQ6ZQY2 392 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 FRMD5Q7Z6J6 570 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 ZNF554Q86TJ5 538 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 RASGRP4Q8TDF6 673 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 RSPH1Q8WYR4 309 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 LBHD1Q9BQE6 289 aaPredicted RBP12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 AMNQ9BXJ7 453 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 ALG13Q9NP73 1137 aaKnown RBP12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 RPL26L1Q9UNX3 145 aaKnown RBP12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 TBX22Q9Y458 520 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 PCDHA1Q9Y5I3 950 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 CFAP99D6REC4 459 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 STX7O15400 261 aaKnown RBP12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 ROR1Q01973 937 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 DRAP1Q14919 205 aaPredicted RBP12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 OR6B2Q6IFH4 312 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 RHPN2Q8IUC4 686 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 CASKIN2Q8WXE0 1202 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 INPP5DQ92835 1189 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 CNDP1Q96KN2 507 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 ZWILCHQ9H900 591 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 SLC52A2Q9HAB3 445 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 KCND1Q9NSA2 647 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 EURLQ9NYK6 297 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 TAGLN3Q9UI15 199 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 FAM25AB3EWG3 89 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 FAM25CB3EWG5 89 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 FAM25GB3EWG6 89 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 GOLGA8TH3BQL2 631 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 GYPCP04921 128 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 S100A9P06702 114 aaKnown RBP12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 SNRPAP09012 282 aaKnown RBP12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 THRAP10827 490 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 MTTPP55157 894 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 ZNF200P98182 395 aaPredicted RBP12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 TJAP1Q5JTD0 557 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 CLEC4GQ6UXB4 293 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 P3H2Q8IVL5 708 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 MAGEB5Q9BZ81 275 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 RNPEPL1Q9HAU8 725 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 KMT5AQ9NQR1 393 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 SH3GLB1Q9Y371 365 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 NEU2Q9Y3R4 380 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 SNX2O60749 519 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 MAGEA4P43358 317 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 GCLCP48506 637 aaPredicted RBP12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 HEATR4Q86WZ0 1026 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 RIN3Q8TB24 985 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 SDR42E1Q8WUS8 393 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 SKA2Q8WVK7 121 aaPredicted RBP12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 ANKS1AQ92625 1134 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 LRRC59Q96AG4 307 aaKnown RBP12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 FHDC1Q9C0D6 1143 aaPredicted RBP12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 HMG20AQ9NP66 347 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 GRID1Q9ULK0 1009 aa12.38□□□□□ -0.43
CSPG4P12-201ENST00000558282 PRR23AA6NEV1 266 aa12.37□□□□□ -0.43
CSPG4P12-201ENST00000558282 RTN2O75298 545 aa12.37□□□□□ -0.43
CSPG4P12-201ENST00000558282 ATP5BP06576 529 aaKnown RBP12.37□□□□□ -0.43
CSPG4P12-201ENST00000558282 FNTAP49354 379 aa12.37□□□□□ -0.43
CSPG4P12-201ENST00000558282 RYBPQ8N488 228 aaPredicted RBP12.37□□□□□ -0.43
CSPG4P12-201ENST00000558282 RNF25Q96BH1 459 aaPredicted RBP12.37□□□□□ -0.43
CSPG4P12-201ENST00000558282 NEUROG2Q9H2A3 272 aa12.37□□□□□ -0.43
CSPG4P12-201ENST00000558282 ZSWIM5Q9P217 1185 aa12.37□□□□□ -0.43
CSPG4P12-201ENST00000558282 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.37□□□□□ -0.43
CSPG4P12-201ENST00000558282 TAF4O00268 1085 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms