RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 SPATA20Q8TB22 786 aa13.12□□□□□ -0.31
CDK12-203ENST00000558240 SPPL3Q8TCT6 385 aa13.12□□□□□ -0.31
CDK12-203ENST00000558240 MYLIPQ8WY64 445 aa13.12□□□□□ -0.31
CDK12-203ENST00000558240 POMGNT1Q8WZA1 660 aa13.12□□□□□ -0.31
CDK12-203ENST00000558240 GSDMAQ96QA5 445 aa13.12□□□□□ -0.31
CDK12-203ENST00000558240 TSPAN18Q96SJ8 248 aa13.12□□□□□ -0.31
CDK12-203ENST00000558240 GBP3Q9H0R5 595 aa13.12□□□□□ -0.31
CDK12-203ENST00000558240 LMAN2LQ9H0V9 348 aa13.12□□□□□ -0.31
CDK12-203ENST00000558240 IKZF4Q9H2S9 585 aa13.12□□□□□ -0.31
CDK12-203ENST00000558240 RMND1Q9NWS8 449 aa13.12□□□□□ -0.31
CDK12-203ENST00000558240 SPG21Q9NZD8 308 aa13.12□□□□□ -0.31
CDK12-203ENST00000558240 CGNQ9P2M7 1197 aaKnown RBP13.12□□□□□ -0.31
CDK12-203ENST00000558240 AGO2Q9UKV8 859 aaKnown RBP13.12□□□□□ -0.31
CDK12-203ENST00000558240 SMIM28A0A1B0GU29 152 aa13.11□□□□□ -0.31
CDK12-203ENST00000558240 GOLGA6L22H0YM25 854 aa13.11□□□□□ -0.31
CDK12-203ENST00000558240 B4GALT3O60512 393 aa13.11□□□□□ -0.31
CDK12-203ENST00000558240 FGF18O76093 207 aa13.11□□□□□ -0.31
CDK12-203ENST00000558240 KIF20AO95235 890 aa13.11□□□□□ -0.31
CDK12-203ENST00000558240 LDHAP00338 332 aaKnown RBP13.11□□□□□ -0.31
CDK12-203ENST00000558240 ITGB1P05556 798 aa13.11□□□□□ -0.31
CDK12-203ENST00000558240 ADRB2P07550 413 aa13.11□□□□□ -0.31
CDK12-203ENST00000558240 KCNE1P15382 129 aa13.11□□□□□ -0.31
CDK12-203ENST00000558240 KRT17Q04695 432 aa13.11□□□□□ -0.31
CDK12-203ENST00000558240 PTPROQ16827 1216 aa13.11□□□□□ -0.31
CDK12-203ENST00000558240 KNOP1Q1ED39 458 aaKnown RBP13.11□□□□□ -0.31
CDK12-203ENST00000558240 SEZ6Q53EL9 994 aa13.11□□□□□ -0.31
CDK12-203ENST00000558240 SLC39A11Q8N1S5 342 aa13.11□□□□□ -0.31
CDK12-203ENST00000558240 GDPD5Q8WTR4 605 aa13.11□□□□□ -0.31
CDK12-203ENST00000558240 SNX27Q96L92 541 aa13.11□□□□□ -0.31
CDK12-203ENST00000558240 PPP1R10Q96QC0 940 aaKnown RBP13.11□□□□□ -0.31
CDK12-203ENST00000558240 GTPBP4Q9BZE4 634 aaKnown RBP13.11□□□□□ -0.31
CDK12-203ENST00000558240 CXCL16Q9H2A7 254 aa13.11□□□□□ -0.31
CDK12-203ENST00000558240 RPF1Q9H9Y2 349 aaKnown RBP13.11□□□□□ -0.31
CDK12-203ENST00000558240 LMBRD1Q9NUN5 540 aa13.11□□□□□ -0.31
CDK12-203ENST00000558240 CNTN3Q9P232 1028 aa13.11□□□□□ -0.31
CDK12-203ENST00000558240 DNAJB4Q9UDY4 337 aa13.11□□□□□ -0.31
CDK12-203ENST00000558240 CPSF3Q9UKF6 684 aaKnown RBP13.11□□□□□ -0.31
CDK12-203ENST00000558240 LZTS1Q9Y250 596 aa13.11□□□□□ -0.31
CDK12-203ENST00000558240 FAN1Q9Y2M0 1017 aa13.11□□□□□ -0.31
CDK12-203ENST00000558240 TTC26A0AVF1 554 aa13.1□□□□□ -0.31
CDK12-203ENST00000558240 NRP1O14786 923 aa13.1□□□□□ -0.31
CDK12-203ENST00000558240 GRM6O15303 877 aa13.1□□□□□ -0.31
CDK12-203ENST00000558240 TGFB1I1O43294 461 aa13.1□□□□□ -0.31
CDK12-203ENST00000558240 CXCL8P10145 99 aa13.1□□□□□ -0.31
CDK12-203ENST00000558240 FOSL2P15408 326 aa13.1□□□□□ -0.31
CDK12-203ENST00000558240 TNFSF9P41273 254 aa13.1□□□□□ -0.31
CDK12-203ENST00000558240 SLC11A1P49279 550 aa13.1□□□□□ -0.31
CDK12-203ENST00000558240 TUSC3Q13454 348 aa13.1□□□□□ -0.31
CDK12-203ENST00000558240 NAB2Q15742 525 aa13.1□□□□□ -0.31
CDK12-203ENST00000558240 ENOX2Q16206 610 aaKnown RBP13.1□□□□□ -0.31
CDK12-203ENST00000558240 ZBTB41Q5SVQ8 909 aa13.1□□□□□ -0.31
CDK12-203ENST00000558240 HS2ST1Q7LGA3 356 aa13.1□□□□□ -0.31
CDK12-203ENST00000558240 CD302Q8IX05 232 aa13.1□□□□□ -0.31
CDK12-203ENST00000558240 NELFCDQ8IXH7 590 aa13.1□□□□□ -0.31
CDK12-203ENST00000558240 GOLGA5Q8TBA6 731 aa13.1□□□□□ -0.31
CDK12-203ENST00000558240 SMARCE1Q969G3 411 aa13.1□□□□□ -0.31
CDK12-203ENST00000558240 MRPL38Q96DV4 380 aaKnown RBP13.1□□□□□ -0.31
CDK12-203ENST00000558240 IGSF21Q96ID5 467 aa13.1□□□□□ -0.31
CDK12-203ENST00000558240 ALG13Q9NP73 1137 aaKnown RBP13.1□□□□□ -0.31
CDK12-203ENST00000558240 SLC38A7Q9NVC3 462 aa13.1□□□□□ -0.31
CDK12-203ENST00000558240 STK39Q9UEW8 545 aa13.1□□□□□ -0.31
CDK12-203ENST00000558240 PUF60Q9UHX1 559 aaKnown RBP13.1□□□□□ -0.31
CDK12-203ENST00000558240 STXBP5LQ9Y2K9 1186 aa13.1□□□□□ -0.31
CDK12-203ENST00000558240 PCDHA5Q9Y5H7 936 aa13.1□□□□□ -0.31
CDK12-203ENST00000558240 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.1□□□□□ -0.31
CDK12-203ENST00000558240 MTCH2Q9Y6C9 303 aa13.1□□□□□ -0.31
CDK12-203ENST00000558240 NT5C1B-RDH14C9J2C7 533 aa13.09□□□□□ -0.31
CDK12-203ENST00000558240 MEFVO15553 781 aaPredicted RBP13.09□□□□□ -0.31
CDK12-203ENST00000558240 EXTL3O43909 919 aa13.09□□□□□ -0.31
CDK12-203ENST00000558240 IGFBP4P22692 258 aa13.09□□□□□ -0.31
CDK12-203ENST00000558240 PBX3P40426 434 aa13.09□□□□□ -0.31
CDK12-203ENST00000558240 OR1G1P47890 313 aa13.09□□□□□ -0.31
CDK12-203ENST00000558240 ACOT2P49753 483 aa13.09□□□□□ -0.31
CDK12-203ENST00000558240 PPP2R3AQ06190 1150 aa13.09□□□□□ -0.31
CDK12-203ENST00000558240 HSP90AA2PQ14568 343 aaPredicted RBP13.09□□□□□ -0.31
CDK12-203ENST00000558240 ZNF658Q5TYW1 1059 aaPredicted RBP13.09□□□□□ -0.31
CDK12-203ENST00000558240 ARMCX5Q6P1M9 558 aa13.09□□□□□ -0.31
CDK12-203ENST00000558240 CRELD2Q6UXH1 353 aaPredicted RBP13.09□□□□□ -0.31
CDK12-203ENST00000558240 C12orf56Q8IXR9 622 aa13.09□□□□□ -0.31
CDK12-203ENST00000558240 GUF1Q8N442 669 aaKnown RBP13.09□□□□□ -0.31
CDK12-203ENST00000558240 TMEM174Q8WUU8 243 aa13.09□□□□□ -0.31
CDK12-203ENST00000558240 POF1BQ8WVV4 589 aa13.09□□□□□ -0.31
CDK12-203ENST00000558240 TMEM169Q96HH4 297 aa13.09□□□□□ -0.31
CDK12-203ENST00000558240 UROC1Q96N76 676 aa13.09□□□□□ -0.31
CDK12-203ENST00000558240 ZMAT2Q96NC0 199 aaKnown RBP13.09□□□□□ -0.31
CDK12-203ENST00000558240 CBWD1Q9BRT8 395 aa13.09□□□□□ -0.31
CDK12-203ENST00000558240 COLEC11Q9BWP8 271 aa13.09□□□□□ -0.31
CDK12-203ENST00000558240 ASB7Q9H672 318 aa13.09□□□□□ -0.31
CDK12-203ENST00000558240 AGPAT3Q9NRZ7 376 aa13.09□□□□□ -0.31
CDK12-203ENST00000558240 BRWD1Q9NSI6 2320 aa13.08□□□□□ -0.31
CDK12-203ENST00000558240 LACTBL1A8MY62 500 aa13.08□□□□□ -0.32
CDK12-203ENST00000558240 PDXKO00764 312 aa13.08□□□□□ -0.32
CDK12-203ENST00000558240 DNAJB1P25685 340 aa13.08□□□□□ -0.32
CDK12-203ENST00000558240 CAMK1Q14012 370 aa13.08□□□□□ -0.32
CDK12-203ENST00000558240 ZBTB6Q15916 424 aa13.08□□□□□ -0.32
CDK12-203ENST00000558240 COBLL1Q53SF7 1204 aa13.08□□□□□ -0.32
CDK12-203ENST00000558240 GLRA4Q5JXX5 417 aa13.08□□□□□ -0.32
CDK12-203ENST00000558240 PDE12Q6L8Q7 609 aaKnown RBP13.08□□□□□ -0.32
CDK12-203ENST00000558240 DDX53Q86TM3 631 aaKnown RBP13.08□□□□□ -0.32
CDK12-203ENST00000558240 GPD1LQ8N335 351 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms