RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 DSC1Q08554 894 aa18.24■□□□□ 0.51
PBX4-202ENST00000557978 PTPROQ16827 1216 aa18.24■□□□□ 0.51
PBX4-202ENST00000557978 SEZ6Q53EL9 994 aa18.24■□□□□ 0.51
PBX4-202ENST00000557978 XKR4Q5GH76 650 aa18.24■□□□□ 0.51
PBX4-202ENST00000557978 ARMCX5Q6P1M9 558 aa18.24■□□□□ 0.51
PBX4-202ENST00000557978 HS2ST1Q7LGA3 356 aa18.24■□□□□ 0.51
PBX4-202ENST00000557978 CD302Q8IX05 232 aa18.24■□□□□ 0.51
PBX4-202ENST00000557978 KIAA0895Q8NCT3 520 aa18.24■□□□□ 0.51
PBX4-202ENST00000557978 SMARCE1Q969G3 411 aa18.24■□□□□ 0.51
PBX4-202ENST00000557978 SNX27Q96L92 541 aa18.24■□□□□ 0.51
PBX4-202ENST00000557978 RPF1Q9H9Y2 349 aaKnown RBP18.24■□□□□ 0.51
PBX4-202ENST00000557978 DNAJB4Q9UDY4 337 aa18.24■□□□□ 0.51
PBX4-202ENST00000557978 PUF60Q9UHX1 559 aaKnown RBP18.24■□□□□ 0.51
PBX4-202ENST00000557978 PLAGL2Q9UPG8 496 aa18.24■□□□□ 0.51
PBX4-202ENST00000557978 FAN1Q9Y2M0 1017 aa18.24■□□□□ 0.51
PBX4-202ENST00000557978 PTGESO14684 152 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 FAM189A1O60320 539 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 LPXNO60711 386 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 FGF18O76093 207 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 IGFBP4P22692 258 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 ADSSP30520 456 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 TUSC3Q13454 348 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 KNOP1Q1ED39 458 aaKnown RBP18.23■□□□□ 0.51
PBX4-202ENST00000557978 SLC10A6Q3KNW5 377 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 NELFCDQ8IXH7 590 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 COLGALT2Q8IYK4 626 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 SPATA20Q8TB22 786 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 GOLGA5Q8TBA6 731 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 TMEM169Q96HH4 297 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 TSPAN18Q96SJ8 248 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 IKZF4Q9H2S9 585 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 ALG13Q9NP73 1137 aaKnown RBP18.23■□□□□ 0.51
PBX4-202ENST00000557978 LMBRD1Q9NUN5 540 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 SLC38A7Q9NVC3 462 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 CNTN3Q9P232 1028 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 STK39Q9UEW8 545 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 CPSF3Q9UKF6 684 aaKnown RBP18.23■□□□□ 0.51
PBX4-202ENST00000557978 PCDHA5Q9Y5H7 936 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.23■□□□□ 0.51
PBX4-202ENST00000557978 REV3LO60673 3130 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 SMIM28A0A1B0GU29 152 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 ITGB1P05556 798 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 CXCL8P10145 99 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 KCNE1P15382 129 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 HOXD13P35453 343 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 TNFSF9P41273 254 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 OR1G1P47890 313 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 ACOT2P49753 483 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 PPP2R3AQ06190 1150 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 HSP90AA2PQ14568 343 aaPredicted RBP18.23■□□□□ 0.51
PBX4-202ENST00000557978 SLC39A11Q8N1S5 342 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 SPPL3Q8TCT6 385 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 PPP1R10Q96QC0 940 aaKnown RBP18.23■□□□□ 0.51
PBX4-202ENST00000557978 LZTS1Q9Y250 596 aa18.23■□□□□ 0.51
PBX4-202ENST00000557978 TTC26A0AVF1 554 aa18.22■□□□□ 0.51
PBX4-202ENST00000557978 NT5C1B-RDH14C9J2C7 533 aa18.22■□□□□ 0.51
PBX4-202ENST00000557978 NRP1O14786 923 aa18.22■□□□□ 0.51
PBX4-202ENST00000557978 PBX3P40426 434 aa18.22■□□□□ 0.51
PBX4-202ENST00000557978 SLC11A1P49279 550 aa18.22■□□□□ 0.51
PBX4-202ENST00000557978 ADGRE1Q14246 886 aa18.22■□□□□ 0.51
PBX4-202ENST00000557978 ENOX2Q16206 610 aaKnown RBP18.22■□□□□ 0.51
PBX4-202ENST00000557978 GLRA4Q5JXX5 417 aa18.22■□□□□ 0.51
PBX4-202ENST00000557978 ZNF658Q5TYW1 1059 aaPredicted RBP18.22■□□□□ 0.51
PBX4-202ENST00000557978 POF1BQ8WVV4 589 aa18.22■□□□□ 0.51
PBX4-202ENST00000557978 MRPL38Q96DV4 380 aaKnown RBP18.22■□□□□ 0.51
PBX4-202ENST00000557978 IGSF21Q96ID5 467 aa18.22■□□□□ 0.51
PBX4-202ENST00000557978 COLEC11Q9BWP8 271 aa18.22■□□□□ 0.51
PBX4-202ENST00000557978 ASB7Q9H672 318 aa18.22■□□□□ 0.51
PBX4-202ENST00000557978 COL6A3P12111 3177 aa18.21■□□□□ 0.51
PBX4-202ENST00000557978 PDXKO00764 312 aa18.21■□□□□ 0.51
PBX4-202ENST00000557978 GRM6O15303 877 aa18.21■□□□□ 0.51
PBX4-202ENST00000557978 TGFB1I1O43294 461 aa18.21■□□□□ 0.51
PBX4-202ENST00000557978 XPOTO43592 962 aaKnown RBP18.21■□□□□ 0.51
PBX4-202ENST00000557978 EXTL3O43909 919 aa18.21■□□□□ 0.51
PBX4-202ENST00000557978 ADRB2P07550 413 aa18.21■□□□□ 0.51
PBX4-202ENST00000557978 NAB2Q15742 525 aa18.21■□□□□ 0.51
PBX4-202ENST00000557978 GPD1LQ8N335 351 aa18.21■□□□□ 0.51
PBX4-202ENST00000557978 GUF1Q8N442 669 aaKnown RBP18.21■□□□□ 0.51
PBX4-202ENST00000557978 UROC1Q96N76 676 aa18.21■□□□□ 0.51
PBX4-202ENST00000557978 CBWD1Q9BRT8 395 aa18.21■□□□□ 0.51
PBX4-202ENST00000557978 FAM213AQ9BRX8 229 aa18.21■□□□□ 0.51
PBX4-202ENST00000557978 CXCL16Q9H2A7 254 aa18.21■□□□□ 0.51
PBX4-202ENST00000557978 PCIF1Q9H4Z3 704 aa18.21■□□□□ 0.51
PBX4-202ENST00000557978 KIAA1586Q9HCI6 787 aa18.21■□□□□ 0.51
PBX4-202ENST00000557978 AGPAT3Q9NRZ7 376 aa18.21■□□□□ 0.51
PBX4-202ENST00000557978 STXBP5LQ9Y2K9 1186 aa18.21■□□□□ 0.51
PBX4-202ENST00000557978 MTCH2Q9Y6C9 303 aa18.21■□□□□ 0.51
PBX4-202ENST00000557978 VWA8A3KMH1 1905 aa18.2■□□□□ 0.5
PBX4-202ENST00000557978 B4GALT3O60512 393 aa18.2■□□□□ 0.5
PBX4-202ENST00000557978 BMS1Q14692 1282 aaKnown RBP18.2■□□□□ 0.5
PBX4-202ENST00000557978 ZBTB41Q5SVQ8 909 aa18.2■□□□□ 0.5
PBX4-202ENST00000557978 PDE12Q6L8Q7 609 aaKnown RBP18.2■□□□□ 0.5
PBX4-202ENST00000557978 CRELD2Q6UXH1 353 aaPredicted RBP18.2■□□□□ 0.5
PBX4-202ENST00000557978 C12orf56Q8IXR9 622 aa18.2■□□□□ 0.5
PBX4-202ENST00000557978 ERCC4Q92889 916 aaPredicted RBP18.2■□□□□ 0.5
PBX4-202ENST00000557978 FAM212AQ96EL1 285 aa18.2■□□□□ 0.5
PBX4-202ENST00000557978 SAAL1Q96ER3 474 aa18.2■□□□□ 0.5
PBX4-202ENST00000557978 ZMAT2Q96NC0 199 aaKnown RBP18.2■□□□□ 0.5
PBX4-202ENST00000557978 TLR9Q9NR96 1032 aa18.2■□□□□ 0.5
PBX4-202ENST00000557978 HSPBP1Q9NZL4 362 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms