RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 CETN3O15182 167 aa23.12■■□□□ 1.29
CASC4-204ENST00000557945 MEFVO15553 781 aaPredicted RBP23.12■■□□□ 1.29
CASC4-204ENST00000557945 CASP4P49662 377 aa23.12■■□□□ 1.29
CASC4-204ENST00000557945 FKBP3Q00688 224 aaKnown RBP23.12■■□□□ 1.29
CASC4-204ENST00000557945 RNASELQ05823 741 aaKnown RBP23.12■■□□□ 1.29
CASC4-204ENST00000557945 GLRA4Q5JXX5 417 aa23.12■■□□□ 1.29
CASC4-204ENST00000557945 CMTR2Q8IYT2 770 aaKnown RBP23.12■■□□□ 1.29
CASC4-204ENST00000557945 TMEM174Q8WUU8 243 aa23.12■■□□□ 1.29
CASC4-204ENST00000557945 RSPH1Q8WYR4 309 aa23.12■■□□□ 1.29
CASC4-204ENST00000557945 FBXL18Q96ME1 805 aa23.12■■□□□ 1.29
CASC4-204ENST00000557945 MRPL9Q9BYD2 267 aaKnown RBP23.12■■□□□ 1.29
CASC4-204ENST00000557945 RC3H2Q9HBD1 1191 aaKnown RBP23.12■■□□□ 1.29
CASC4-204ENST00000557945 MIOSQ9NXC5 875 aa23.12■■□□□ 1.29
CASC4-204ENST00000557945 KANSL3Q9P2N6 904 aa23.12■■□□□ 1.29
CASC4-204ENST00000557945 MSRAQ9UJ68 235 aa23.12■■□□□ 1.29
CASC4-204ENST00000557945 PCDHA11Q9Y5I1 949 aa23.12■■□□□ 1.29
CASC4-204ENST00000557945 TTC26A0AVF1 554 aa23.11■■□□□ 1.29
CASC4-204ENST00000557945 ERCC5P28715 1186 aaPredicted RBP23.11■■□□□ 1.29
CASC4-204ENST00000557945 PBX2P40425 430 aa23.11■■□□□ 1.29
CASC4-204ENST00000557945 RAB30Q15771 203 aa23.11■■□□□ 1.29
CASC4-204ENST00000557945 SPOUT1Q5T280 376 aaKnown RBP23.11■■□□□ 1.29
CASC4-204ENST00000557945 ALKAL1Q6UXT8 129 aa23.11■■□□□ 1.29
CASC4-204ENST00000557945 BRSK2Q8IWQ3 736 aa23.11■■□□□ 1.29
CASC4-204ENST00000557945 LRRC43Q8N309 656 aa23.11■■□□□ 1.29
CASC4-204ENST00000557945 FIBCD1Q8N539 461 aa23.11■■□□□ 1.29
CASC4-204ENST00000557945 CSGALNACT2Q8N6G5 542 aa23.11■■□□□ 1.29
CASC4-204ENST00000557945 FAM193BQ96PV7 902 aaPredicted RBP23.11■■□□□ 1.29
CASC4-204ENST00000557945 DUSP9Q99956 384 aaKnown RBP23.11■■□□□ 1.29
CASC4-204ENST00000557945 DNAJC25Q9H1X3 360 aa23.11■■□□□ 1.29
CASC4-204ENST00000557945 TBC1D13Q9NVG8 400 aa23.11■■□□□ 1.29
CASC4-204ENST00000557945 RANBP2P49792 3224 aaKnown RBP23.11■■□□□ 1.29
CASC4-204ENST00000557945 LCHNA4D1U4 455 aa23.1■■□□□ 1.29
CASC4-204ENST00000557945 INPPL1O15357 1258 aa23.1■■□□□ 1.29
CASC4-204ENST00000557945 IL18RAPO95256 599 aa23.1■■□□□ 1.29
CASC4-204ENST00000557945 ADRB2P07550 413 aa23.1■■□□□ 1.29
CASC4-204ENST00000557945 POU5F1Q01860 360 aaKnown RBP23.1■■□□□ 1.29
CASC4-204ENST00000557945 SPAG1Q07617 926 aa23.1■■□□□ 1.29
CASC4-204ENST00000557945 TPD52L1Q16890 204 aaPredicted RBP23.1■■□□□ 1.29
CASC4-204ENST00000557945 CT47A1Q5JQC4 288 aaPredicted RBP23.1■■□□□ 1.29
CASC4-204ENST00000557945 C11orf57Q6ZUT1 292 aaPredicted RBP23.1■■□□□ 1.29
CASC4-204ENST00000557945 GSTCDQ8NEC7 633 aa23.1■■□□□ 1.29
CASC4-204ENST00000557945 KIF12Q96FN5 646 aa23.1■■□□□ 1.29
CASC4-204ENST00000557945 PBX4Q9BYU1 374 aa23.1■■□□□ 1.29
CASC4-204ENST00000557945 CNTN3Q9P232 1028 aa23.1■■□□□ 1.29
CASC4-204ENST00000557945 SMIM28A0A1B0GU29 152 aa23.09■■□□□ 1.29
CASC4-204ENST00000557945 PTGESO14684 152 aa23.09■■□□□ 1.29
CASC4-204ENST00000557945 AKAP3O75969 853 aa23.09■■□□□ 1.29
CASC4-204ENST00000557945 THP07101 528 aa23.09■■□□□ 1.29
CASC4-204ENST00000557945 PSMC2P35998 433 aaKnown RBP23.09■■□□□ 1.29
CASC4-204ENST00000557945 CYP24A1Q07973 514 aa23.09■■□□□ 1.29
CASC4-204ENST00000557945 GRIK3Q13003 919 aa23.09■■□□□ 1.29
CASC4-204ENST00000557945 XKR4Q5GH76 650 aa23.09■■□□□ 1.29
CASC4-204ENST00000557945 FOXR2Q6PJQ5 311 aa23.09■■□□□ 1.29
CASC4-204ENST00000557945 LRRC55Q6ZSA7 311 aa23.09■■□□□ 1.29
CASC4-204ENST00000557945 CD302Q8IX05 232 aa23.09■■□□□ 1.29
CASC4-204ENST00000557945 FAM186BQ8IYM0 893 aa23.09■■□□□ 1.29
CASC4-204ENST00000557945 SP7Q8TDD2 431 aaPredicted RBP23.09■■□□□ 1.29
CASC4-204ENST00000557945 CCDC127Q96BQ5 260 aa23.09■■□□□ 1.29
CASC4-204ENST00000557945 PDE11AQ9HCR9 933 aa23.09■■□□□ 1.29
CASC4-204ENST00000557945 HCSTQ9UBK5 93 aa23.09■■□□□ 1.29
CASC4-204ENST00000557945 PLAGL2Q9UPG8 496 aa23.09■■□□□ 1.29
CASC4-204ENST00000557945 YBX2Q9Y2T7 364 aaKnown RBP23.09■■□□□ 1.29
CASC4-204ENST00000557945 MRPL42Q9Y6G3 142 aaKnown RBP23.09■■□□□ 1.29
CASC4-204ENST00000557945 CA3P07451 260 aa23.08■■□□□ 1.29
CASC4-204ENST00000557945 KCNE1P15382 129 aa23.08■■□□□ 1.29
CASC4-204ENST00000557945 SMAD3P84022 425 aaKnown RBP23.08■■□□□ 1.29
CASC4-204ENST00000557945 LRIT3Q3SXY7 679 aa23.08■■□□□ 1.29
CASC4-204ENST00000557945 ANO6Q4KMQ2 910 aa23.08■■□□□ 1.29
CASC4-204ENST00000557945 JADE1Q6IE81 842 aa23.08■■□□□ 1.29
CASC4-204ENST00000557945 ZNF280BQ86YH2 543 aa23.08■■□□□ 1.29
CASC4-204ENST00000557945 CEP63Q96MT8 703 aa23.08■■□□□ 1.29
CASC4-204ENST00000557945 ZMAT2Q96NC0 199 aaKnown RBP23.08■■□□□ 1.29
CASC4-204ENST00000557945 MED15Q96RN5 788 aa23.08■■□□□ 1.29
CASC4-204ENST00000557945 FUCA2Q9BTY2 467 aa23.08■■□□□ 1.29
CASC4-204ENST00000557945 SRRTQ9BXP5 876 aaKnown RBP23.08■■□□□ 1.29
CASC4-204ENST00000557945 NKX2-4Q9H2Z4 354 aa23.08■■□□□ 1.29
CASC4-204ENST00000557945 ASB7Q9H672 318 aa23.08■■□□□ 1.29
CASC4-204ENST00000557945 CITO14578 2027 aa23.08■■□□□ 1.29
CASC4-204ENST00000557945 COL4A6Q14031 1691 aa23.07■■□□□ 1.28
CASC4-204ENST00000557945 TRIOBPQ9H2D6 2365 aa23.07■■□□□ 1.28
CASC4-204ENST00000557945 FNDC1Q4ZHG4 1894 aaPredicted RBP23.07■■□□□ 1.28
CASC4-204ENST00000557945 EPB41P11171 864 aaKnown RBP23.07■■□□□ 1.28
CASC4-204ENST00000557945 WNT7BP56706 349 aa23.07■■□□□ 1.28
CASC4-204ENST00000557945 PSMD6Q15008 389 aa23.07■■□□□ 1.28
CASC4-204ENST00000557945 ZC3H3Q8IXZ2 948 aaKnown RBP23.07■■□□□ 1.28
CASC4-204ENST00000557945 MFSD14AQ96MC6 490 aa23.07■■□□□ 1.28
CASC4-204ENST00000557945 FNBP1Q96RU3 617 aa23.07■■□□□ 1.28
CASC4-204ENST00000557945 NAT10Q9H0A0 1025 aaKnown RBP23.07■■□□□ 1.28
CASC4-204ENST00000557945 LINC01553A4QN01 128 aa23.06■■□□□ 1.28
CASC4-204ENST00000557945 ZC3H11AO75152 810 aaKnown RBP eCLIP23.06■■□□□ 1.28
CASC4-204ENST00000557945 DDHD2O94830 711 aa23.06■■□□□ 1.28
CASC4-204ENST00000557945 FGFR1OPO95684 399 aaKnown RBP23.06■■□□□ 1.28
CASC4-204ENST00000557945 NFICP08651 508 aa23.06■■□□□ 1.28
CASC4-204ENST00000557945 DLATP10515 647 aaKnown RBP23.06■■□□□ 1.28
CASC4-204ENST00000557945 TMEM132DQ14C87 1099 aa23.06■■□□□ 1.28
CASC4-204ENST00000557945 SURF1Q15526 300 aa23.06■■□□□ 1.28
CASC4-204ENST00000557945 C18orf25Q96B23 403 aaPredicted RBP23.06■■□□□ 1.28
CASC4-204ENST00000557945 PPP1R10Q96QC0 940 aaKnown RBP23.06■■□□□ 1.28
CASC4-204ENST00000557945 CWH43Q9H720 699 aa23.06■■□□□ 1.28
CASC4-204ENST00000557945 NRDE2Q9H7Z3 1164 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms