RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 BCAR1P56945 870 aa27.83■■■□□ 2.05
SMAD6-202ENST00000557916 ENOX2Q16206 610 aaKnown RBP27.83■■■□□ 2.05
SMAD6-202ENST00000557916 GLRA4Q5JXX5 417 aa27.83■■■□□ 2.05
SMAD6-202ENST00000557916 SAAL1Q96ER3 474 aa27.83■■■□□ 2.05
SMAD6-202ENST00000557916 C11orf84Q9BUA3 381 aaPredicted RBP27.83■■■□□ 2.05
SMAD6-202ENST00000557916 PLEKHA5Q9HAU0 1116 aa27.83■■■□□ 2.05
SMAD6-202ENST00000557916 SMIM28A0A1B0GU29 152 aa27.82■■■□□ 2.04
SMAD6-202ENST00000557916 KIAA0391O15091 583 aaKnown RBP27.82■■■□□ 2.04
SMAD6-202ENST00000557916 CLIC2O15247 247 aa27.82■■■□□ 2.04
SMAD6-202ENST00000557916 ISM2Q6H9L7 571 aa27.82■■■□□ 2.04
SMAD6-202ENST00000557916 COLGALT2Q8IYK4 626 aa27.82■■■□□ 2.04
SMAD6-202ENST00000557916 ZSWIM2Q8NEG5 633 aa27.82■■■□□ 2.04
SMAD6-202ENST00000557916 GOLGA5Q8TBA6 731 aa27.82■■■□□ 2.04
SMAD6-202ENST00000557916 FAM213AQ9BRX8 229 aa27.82■■■□□ 2.04
SMAD6-202ENST00000557916 KCTD10Q9H3F6 313 aa27.82■■■□□ 2.04
SMAD6-202ENST00000557916 CNTN3Q9P232 1028 aa27.82■■■□□ 2.04
SMAD6-202ENST00000557916 KIAA1468Q9P260 1216 aa27.82■■■□□ 2.04
SMAD6-202ENST00000557916 NLRC5Q86WI3 1866 aa27.81■■■□□ 2.04
SMAD6-202ENST00000557916 H3BNC9 293 aa27.81■■■□□ 2.04
SMAD6-202ENST00000557916 EXTL3O43909 919 aa27.81■■■□□ 2.04
SMAD6-202ENST00000557916 DSC1Q08554 894 aa27.81■■■□□ 2.04
SMAD6-202ENST00000557916 GPM6BQ13491 265 aa27.81■■■□□ 2.04
SMAD6-202ENST00000557916 CRELD2Q6UXH1 353 aaPredicted RBP27.81■■■□□ 2.04
SMAD6-202ENST00000557916 KLHL23Q8NBE8 558 aa27.81■■■□□ 2.04
SMAD6-202ENST00000557916 NOC3LQ8WTT2 800 aaKnown RBP27.81■■■□□ 2.04
SMAD6-202ENST00000557916 P2RX5Q93086 422 aa27.81■■■□□ 2.04
SMAD6-202ENST00000557916 PPP1R10Q96QC0 940 aaKnown RBP27.81■■■□□ 2.04
SMAD6-202ENST00000557916 TMEM175Q9BSA9 504 aa27.81■■■□□ 2.04
SMAD6-202ENST00000557916 NUP62CLQ9H1M0 184 aa27.81■■■□□ 2.04
SMAD6-202ENST00000557916 HSPBP1Q9NZL4 362 aa27.81■■■□□ 2.04
SMAD6-202ENST00000557916 RALGAPA2Q2PPJ7 1873 aa27.8■■■□□ 2.04
SMAD6-202ENST00000557916 KIAA1671Q9BY89 1806 aa27.8■■■□□ 2.04
SMAD6-202ENST00000557916 TTC26A0AVF1 554 aa27.8■■■□□ 2.04
SMAD6-202ENST00000557916 GOLGA8IPA6NC78 632 aa27.8■■■□□ 2.04
SMAD6-202ENST00000557916 GOLGA8JA6NMD2 632 aa27.8■■■□□ 2.04
SMAD6-202ENST00000557916 LACTBL1A8MY62 500 aa27.8■■■□□ 2.04
SMAD6-202ENST00000557916 NT5C1B-RDH14C9J2C7 533 aa27.8■■■□□ 2.04
SMAD6-202ENST00000557916 PDXKO00764 312 aa27.8■■■□□ 2.04
SMAD6-202ENST00000557916 MBD3O95983 291 aa27.8■■■□□ 2.04
SMAD6-202ENST00000557916 ALDH2P05091 517 aa27.8■■■□□ 2.04
SMAD6-202ENST00000557916 GALTP07902 379 aa27.8■■■□□ 2.04
SMAD6-202ENST00000557916 KCNE1P15382 129 aa27.8■■■□□ 2.04
SMAD6-202ENST00000557916 SLC11A1P49279 550 aa27.8■■■□□ 2.04
SMAD6-202ENST00000557916 PPP2R3AQ06190 1150 aa27.8■■■□□ 2.04
SMAD6-202ENST00000557916 NAB2Q15742 525 aa27.8■■■□□ 2.04
SMAD6-202ENST00000557916 GPD1LQ8N335 351 aa27.8■■■□□ 2.04
SMAD6-202ENST00000557916 GDPD5Q8WTR4 605 aa27.8■■■□□ 2.04
SMAD6-202ENST00000557916 FAM212AQ96EL1 285 aa27.8■■■□□ 2.04
SMAD6-202ENST00000557916 ZMAT2Q96NC0 199 aaKnown RBP27.8■■■□□ 2.04
SMAD6-202ENST00000557916 MTMR10Q9NXD2 777 aa27.8■■■□□ 2.04
SMAD6-202ENST00000557916 CARNS1A5YM72 827 aa27.79■■■□□ 2.04
SMAD6-202ENST00000557916 BIN1O00499 593 aa27.79■■■□□ 2.04
SMAD6-202ENST00000557916 ADRB2P07550 413 aa27.79■■■□□ 2.04
SMAD6-202ENST00000557916 PPM1AP35813 382 aa27.79■■■□□ 2.04
SMAD6-202ENST00000557916 PRCPP42785 496 aa27.79■■■□□ 2.04
SMAD6-202ENST00000557916 CYP2J2P51589 502 aa27.79■■■□□ 2.04
SMAD6-202ENST00000557916 POU5F1Q01860 360 aaKnown RBP27.79■■■□□ 2.04
SMAD6-202ENST00000557916 TUSC3Q13454 348 aa27.79■■■□□ 2.04
SMAD6-202ENST00000557916 COBLL1Q53SF7 1204 aa27.79■■■□□ 2.04
SMAD6-202ENST00000557916 CD302Q8IX05 232 aa27.79■■■□□ 2.04
SMAD6-202ENST00000557916 C12orf56Q8IXR9 622 aa27.79■■■□□ 2.04
SMAD6-202ENST00000557916 CDX2Q99626 313 aaPredicted RBP27.79■■■□□ 2.04
SMAD6-202ENST00000557916 SPG21Q9NZD8 308 aa27.79■■■□□ 2.04
SMAD6-202ENST00000557916 FAN1Q9Y2M0 1017 aa27.79■■■□□ 2.04
SMAD6-202ENST00000557916 FGF18O76093 207 aa27.78■■■□□ 2.04
SMAD6-202ENST00000557916 ITGB1P05556 798 aa27.78■■■□□ 2.04
SMAD6-202ENST00000557916 OR1G1P47890 313 aa27.78■■■□□ 2.04
SMAD6-202ENST00000557916 MORC3Q14149 939 aa27.78■■■□□ 2.04
SMAD6-202ENST00000557916 SLC39A11Q8N1S5 342 aa27.78■■■□□ 2.04
SMAD6-202ENST00000557916 GUCD1Q96NT3 240 aa27.78■■■□□ 2.04
SMAD6-202ENST00000557916 ALG13Q9NP73 1137 aaKnown RBP27.78■■■□□ 2.04
SMAD6-202ENST00000557916 SLC38A7Q9NVC3 462 aa27.78■■■□□ 2.04
SMAD6-202ENST00000557916 TDRD15B5MCY1 1934 aaKnown RBP27.78■■■□□ 2.04
SMAD6-202ENST00000557916 NRP1O14786 923 aa27.77■■■□□ 2.04
SMAD6-202ENST00000557916 SPAG1Q07617 926 aa27.77■■■□□ 2.04
SMAD6-202ENST00000557916 XXYLT1Q8NBI6 393 aa27.77■■■□□ 2.04
SMAD6-202ENST00000557916 KIAA1586Q9HCI6 787 aa27.77■■■□□ 2.04
SMAD6-202ENST00000557916 CITO14578 2027 aa27.77■■■□□ 2.04
SMAD6-202ENST00000557916 CALUO43852 315 aaPredicted RBP27.76■■■□□ 2.04
SMAD6-202ENST00000557916 LPXNO60711 386 aa27.76■■■□□ 2.04
SMAD6-202ENST00000557916 TRIML1Q8N9V2 468 aa27.76■■■□□ 2.04
SMAD6-202ENST00000557916 MYLIPQ8WY64 445 aa27.76■■■□□ 2.04
SMAD6-202ENST00000557916 GAS2L1Q99501 681 aaPredicted RBP27.76■■■□□ 2.04
SMAD6-202ENST00000557916 ASB7Q9H672 318 aa27.76■■■□□ 2.04
SMAD6-202ENST00000557916 RBAKQ9NYW8 714 aaPredicted RBP27.76■■■□□ 2.04
SMAD6-202ENST00000557916 TRAF3IP3Q9Y228 551 aa27.76■■■□□ 2.04
SMAD6-202ENST00000557916 PRG3Q9Y2Y8 225 aaPredicted RBP27.76■■■□□ 2.04
SMAD6-202ENST00000557916 MYO9BQ13459 2157 aa27.76■■■□□ 2.03
SMAD6-202ENST00000557916 CASTOR2A6NHX0 329 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 GRM6O15303 877 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 BMP6P22004 513 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 PLCB3Q01970 1234 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 STIM1Q13586 685 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 TMEM173Q86WV6 379 aaPredicted RBP27.75■■■□□ 2.03
SMAD6-202ENST00000557916 BRSK2Q8IWQ3 736 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 ADSSL1Q8N142 457 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 SPPL3Q8TCT6 385 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 C18orf25Q96B23 403 aaPredicted RBP27.75■■■□□ 2.03
SMAD6-202ENST00000557916 KIF12Q96FN5 646 aa27.75■■■□□ 2.03
SMAD6-202ENST00000557916 IGSF21Q96ID5 467 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms