RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 GALTP07902 379 aa15.63■□□□□ 0.09
USP3-205ENST00000557884 FOSL2P15408 326 aa15.63■□□□□ 0.09
USP3-205ENST00000557884 OR1G1P47890 313 aa15.63■□□□□ 0.09
USP3-205ENST00000557884 ALDH7A1P49419 539 aaKnown RBP15.63■□□□□ 0.09
USP3-205ENST00000557884 SPAG1Q07617 926 aa15.63■□□□□ 0.09
USP3-205ENST00000557884 ENOX2Q16206 610 aaKnown RBP15.63■□□□□ 0.09
USP3-205ENST00000557884 CAMK4Q16566 473 aa15.63■□□□□ 0.09
USP3-205ENST00000557884 BMT2Q1RMZ1 405 aa15.63■□□□□ 0.09
USP3-205ENST00000557884 SLC10A6Q3KNW5 377 aa15.63■□□□□ 0.09
USP3-205ENST00000557884 ARMCX5Q6P1M9 558 aa15.63■□□□□ 0.09
USP3-205ENST00000557884 TMEM173Q86WV6 379 aaPredicted RBP15.63■□□□□ 0.09
USP3-205ENST00000557884 SMYD4Q8IYR2 804 aaPredicted RBP15.63■□□□□ 0.09
USP3-205ENST00000557884 MICALL1Q8N3F8 863 aa15.63■□□□□ 0.09
USP3-205ENST00000557884 RABGGTAQ92696 567 aa15.63■□□□□ 0.09
USP3-205ENST00000557884 FAM212AQ96EL1 285 aa15.63■□□□□ 0.09
USP3-205ENST00000557884 ZMAT2Q96NC0 199 aaKnown RBP15.63■□□□□ 0.09
USP3-205ENST00000557884 FAM213AQ9BRX8 229 aa15.63■□□□□ 0.09
USP3-205ENST00000557884 RPF1Q9H9Y2 349 aaKnown RBP15.63■□□□□ 0.09
USP3-205ENST00000557884 SPG21Q9NZD8 308 aa15.63■□□□□ 0.09
USP3-205ENST00000557884 MYH11P35749 1972 aa15.63■□□□□ 0.09
USP3-205ENST00000557884 CASTOR2A6NHX0 329 aa15.62■□□□□ 0.09
USP3-205ENST00000557884 CLIC2O15247 247 aa15.62■□□□□ 0.09
USP3-205ENST00000557884 TGFB1I1O43294 461 aa15.62■□□□□ 0.09
USP3-205ENST00000557884 FGF18O76093 207 aa15.62■□□□□ 0.09
USP3-205ENST00000557884 THP07101 528 aa15.62■□□□□ 0.09
USP3-205ENST00000557884 GARTP22102 1010 aa15.62■□□□□ 0.09
USP3-205ENST00000557884 DSC1Q08554 894 aa15.62■□□□□ 0.09
USP3-205ENST00000557884 KYAT1Q16773 422 aa15.62■□□□□ 0.09
USP3-205ENST00000557884 KNOP1Q1ED39 458 aaKnown RBP15.62■□□□□ 0.09
USP3-205ENST00000557884 ISM2Q6H9L7 571 aa15.62■□□□□ 0.09
USP3-205ENST00000557884 HS2ST1Q7LGA3 356 aa15.62■□□□□ 0.09
USP3-205ENST00000557884 COLGALT2Q8IYK4 626 aa15.62■□□□□ 0.09
USP3-205ENST00000557884 SLC39A11Q8N1S5 342 aa15.62■□□□□ 0.09
USP3-205ENST00000557884 BCL7CQ8WUZ0 217 aaPredicted RBP15.62■□□□□ 0.09
USP3-205ENST00000557884 AGPAT3Q9NRZ7 376 aa15.62■□□□□ 0.09
USP3-205ENST00000557884 RMND1Q9NWS8 449 aa15.62■□□□□ 0.09
USP3-205ENST00000557884 CPSF3Q9UKF6 684 aaKnown RBP15.62■□□□□ 0.09
USP3-205ENST00000557884 SMIM28A0A1B0GU29 152 aa15.61■□□□□ 0.09
USP3-205ENST00000557884 LACTBL1A8MY62 500 aa15.61■□□□□ 0.09
USP3-205ENST00000557884 F8W810 466 aa15.61■□□□□ 0.09
USP3-205ENST00000557884 NRP1O14786 923 aa15.61■□□□□ 0.09
USP3-205ENST00000557884 DNAJB1P25685 340 aa15.61■□□□□ 0.09
USP3-205ENST00000557884 PPM1AP35813 382 aa15.61■□□□□ 0.09
USP3-205ENST00000557884 CYP2J2P51589 502 aa15.61■□□□□ 0.09
USP3-205ENST00000557884 PPP2R3AQ06190 1150 aa15.61■□□□□ 0.09
USP3-205ENST00000557884 XKR4Q5GH76 650 aa15.61■□□□□ 0.09
USP3-205ENST00000557884 ALKAL1Q6UXT8 129 aa15.61■□□□□ 0.09
USP3-205ENST00000557884 ELOA2Q8IYF1 753 aaPredicted RBP15.61■□□□□ 0.09
USP3-205ENST00000557884 TMEM130Q8N3G9 435 aa15.61■□□□□ 0.09
USP3-205ENST00000557884 SPPL3Q8TCT6 385 aa15.61■□□□□ 0.09
USP3-205ENST00000557884 P2RX5Q93086 422 aa15.61■□□□□ 0.09
USP3-205ENST00000557884 C18orf25Q96B23 403 aaPredicted RBP15.61■□□□□ 0.09
USP3-205ENST00000557884 PPP1R10Q96QC0 940 aaKnown RBP15.61■□□□□ 0.09
USP3-205ENST00000557884 PAAF1Q9BRP4 392 aa15.61■□□□□ 0.09
USP3-205ENST00000557884 TMEM175Q9BSA9 504 aa15.61■□□□□ 0.09
USP3-205ENST00000557884 GOLGA2P5Q9HBQ8 144 aa15.61■□□□□ 0.09
USP3-205ENST00000557884 HSPBP1Q9NZL4 362 aa15.61■□□□□ 0.09
USP3-205ENST00000557884 CNTN3Q9P232 1028 aa15.61■□□□□ 0.09
USP3-205ENST00000557884 MAN1B1Q9UKM7 699 aa15.61■□□□□ 0.09
USP3-205ENST00000557884 FAN1Q9Y2M0 1017 aa15.61■□□□□ 0.09
USP3-205ENST00000557884 FNDC1Q4ZHG4 1894 aaPredicted RBP15.61■□□□□ 0.09
USP3-205ENST00000557884 EYSQ5T1H1 3165 aa15.6■□□□□ 0.09
USP3-205ENST00000557884 TTC26A0AVF1 554 aa15.6■□□□□ 0.09
USP3-205ENST00000557884 BIN1O00499 593 aa15.6■□□□□ 0.09
USP3-205ENST00000557884 ALDH2P05091 517 aa15.6■□□□□ 0.09
USP3-205ENST00000557884 KCNE1P15382 129 aa15.6■□□□□ 0.09
USP3-205ENST00000557884 TUSC3Q13454 348 aa15.6■□□□□ 0.09
USP3-205ENST00000557884 NAB2Q15742 525 aa15.6■□□□□ 0.09
USP3-205ENST00000557884 CRELD2Q6UXH1 353 aaPredicted RBP15.6■□□□□ 0.09
USP3-205ENST00000557884 SPATA20Q8TB22 786 aa15.6■□□□□ 0.09
USP3-205ENST00000557884 GPT2Q8TD30 523 aa15.6■□□□□ 0.09
USP3-205ENST00000557884 POF1BQ8WVV4 589 aa15.6■□□□□ 0.09
USP3-205ENST00000557884 KIF12Q96FN5 646 aa15.6■□□□□ 0.09
USP3-205ENST00000557884 TMEM169Q96HH4 297 aa15.6■□□□□ 0.09
USP3-205ENST00000557884 IGSF21Q96ID5 467 aa15.6■□□□□ 0.09
USP3-205ENST00000557884 GSDMAQ96QA5 445 aa15.6■□□□□ 0.09
USP3-205ENST00000557884 MARCH5Q9NX47 278 aa15.6■□□□□ 0.09
USP3-205ENST00000557884 TUBGCP4Q9UGJ1 667 aa15.6■□□□□ 0.09
USP3-205ENST00000557884 MTCH2Q9Y6C9 303 aa15.6■□□□□ 0.09
USP3-205ENST00000557884 EXTL3O43909 919 aa15.59■□□□□ 0.09
USP3-205ENST00000557884 PLCB3Q01970 1234 aa15.59■□□□□ 0.09
USP3-205ENST00000557884 KRT17Q04695 432 aa15.59■□□□□ 0.09
USP3-205ENST00000557884 SOX4Q06945 474 aaPredicted RBP15.59■□□□□ 0.09
USP3-205ENST00000557884 PTPROQ16827 1216 aa15.59■□□□□ 0.09
USP3-205ENST00000557884 GPD1LQ8N335 351 aa15.59■□□□□ 0.09
USP3-205ENST00000557884 HASPINQ8TF76 798 aa15.59■□□□□ 0.09
USP3-205ENST00000557884 KCTD10Q9H3F6 313 aa15.59■□□□□ 0.09
USP3-205ENST00000557884 CLSTN2Q9H4D0 955 aa15.59■□□□□ 0.09
USP3-205ENST00000557884 PLEKHA5Q9HAU0 1116 aa15.59■□□□□ 0.09
USP3-205ENST00000557884 PCDHGC5Q9Y5F6 944 aa15.59■□□□□ 0.09
USP3-205ENST00000557884 SPTBN5Q9NRC6 3674 aaKnown RBP15.59■□□□□ 0.09
USP3-205ENST00000557884 KIF20AO95235 890 aa15.58■□□□□ 0.08
USP3-205ENST00000557884 LDHAP00338 332 aaKnown RBP15.58■□□□□ 0.08
USP3-205ENST00000557884 NFICP08651 508 aa15.58■□□□□ 0.08
USP3-205ENST00000557884 IGFBP6P24592 240 aaPredicted RBP15.58■□□□□ 0.08
USP3-205ENST00000557884 IRS1P35568 1242 aa15.58■□□□□ 0.08
USP3-205ENST00000557884 GUCY2FP51841 1108 aa15.58■□□□□ 0.08
USP3-205ENST00000557884 WNT7BP56706 349 aa15.58■□□□□ 0.08
USP3-205ENST00000557884 CAMK1Q14012 370 aa15.58■□□□□ 0.08
USP3-205ENST00000557884 HSP90AA2PQ14568 343 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms