RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 TBCCD1Q9NVR7 557 aa4.38□□□□□ -1.71
FOXN3-217ENST00000557572 ZKSCAN5Q9Y2L8 839 aa4.38□□□□□ -1.71
FOXN3-217ENST00000557572 LAS1LQ9Y4W2 734 aaKnown RBP4.38□□□□□ -1.71
FOXN3-217ENST00000557572 MOSPD3O75425 235 aa4.37□□□□□ -1.71
FOXN3-217ENST00000557572 EIF3JO75822 258 aaKnown RBP4.37□□□□□ -1.71
FOXN3-217ENST00000557572 GPD1P21695 349 aa4.37□□□□□ -1.71
FOXN3-217ENST00000557572 KELP23276 732 aa4.37□□□□□ -1.71
FOXN3-217ENST00000557572 PAX3P23760 479 aa4.37□□□□□ -1.71
FOXN3-217ENST00000557572 KIF11P52732 1056 aa4.37□□□□□ -1.71
FOXN3-217ENST00000557572 RHBDL3P58872 404 aa4.37□□□□□ -1.71
FOXN3-217ENST00000557572 SETQ01105 290 aaPredicted RBP4.37□□□□□ -1.71
FOXN3-217ENST00000557572 AMPD3Q01432 767 aa4.37□□□□□ -1.71
FOXN3-217ENST00000557572 SLC9A4Q6AI14 798 aa4.37□□□□□ -1.71
FOXN3-217ENST00000557572 ABHD17CQ6PCB6 329 aa4.37□□□□□ -1.71
FOXN3-217ENST00000557572 CCDC146Q8IYE0 955 aa4.37□□□□□ -1.71
FOXN3-217ENST00000557572 UBA5Q9GZZ9 404 aa4.37□□□□□ -1.71
FOXN3-217ENST00000557572 FLRT1Q9NZU1 646 aa4.37□□□□□ -1.71
FOXN3-217ENST00000557572 SIRPGQ9P1W8 387 aa4.37□□□□□ -1.71
FOXN3-217ENST00000557572 NDOR1Q9UHB4 597 aa4.37□□□□□ -1.71
FOXN3-217ENST00000557572 DVL2O14641 736 aa4.36□□□□□ -1.71
FOXN3-217ENST00000557572 CFIP05156 583 aa4.36□□□□□ -1.71
FOXN3-217ENST00000557572 GAAP10253 952 aa4.36□□□□□ -1.71
FOXN3-217ENST00000557572 MGAT1P26572 445 aa4.36□□□□□ -1.71
FOXN3-217ENST00000557572 TBX4P57082 545 aa4.36□□□□□ -1.71
FOXN3-217ENST00000557572 FOXD4Q12950 439 aaPredicted RBP4.36□□□□□ -1.71
FOXN3-217ENST00000557572 MYBPC3Q14896 1274 aa4.36□□□□□ -1.71
FOXN3-217ENST00000557572 FAM102AQ5T9C2 384 aaPredicted RBP4.36□□□□□ -1.71
FOXN3-217ENST00000557572 SOGA3Q5TF21 947 aa4.36□□□□□ -1.71
FOXN3-217ENST00000557572 EFCAB12Q6NXP0 572 aa4.36□□□□□ -1.71
FOXN3-217ENST00000557572 ZDHHC17Q8IUH5 632 aa4.36□□□□□ -1.71
FOXN3-217ENST00000557572 FMNL3Q8IVF7 1028 aa4.36□□□□□ -1.71
FOXN3-217ENST00000557572 IGSF22Q8N9C0 903 aa4.36□□□□□ -1.71
FOXN3-217ENST00000557572 AIFM2Q9BRQ8 373 aa4.36□□□□□ -1.71
FOXN3-217ENST00000557572 BHMT2Q9H2M3 363 aa4.36□□□□□ -1.71
FOXN3-217ENST00000557572 PNMA2Q9UL42 364 aa4.36□□□□□ -1.71
FOXN3-217ENST00000557572 NOX1Q9Y5S8 564 aa4.36□□□□□ -1.71
FOXN3-217ENST00000557572 IGKV2D-30A0A075B6S6 120 aa4.35□□□□□ -1.71
FOXN3-217ENST00000557572 ENPP3O14638 875 aa4.35□□□□□ -1.71
FOXN3-217ENST00000557572 OPHN1O60890 802 aa4.35□□□□□ -1.71
FOXN3-217ENST00000557572 ZNF260Q3ZCT1 412 aa4.35□□□□□ -1.71
FOXN3-217ENST00000557572 PHYKPLQ8IUZ5 450 aa4.35□□□□□ -1.71
FOXN3-217ENST00000557572 CHST14Q8NCH0 376 aa4.35□□□□□ -1.71
FOXN3-217ENST00000557572 RNPC3Q96LT9 517 aaKnown RBP4.35□□□□□ -1.71
FOXN3-217ENST00000557572 TUBGCP5Q96RT8 1024 aa4.35□□□□□ -1.71
FOXN3-217ENST00000557572 SOX7Q9BT81 388 aa4.35□□□□□ -1.71
FOXN3-217ENST00000557572 MAF1Q9H063 256 aa4.35□□□□□ -1.71
FOXN3-217ENST00000557572 TRIM39Q9HCM9 518 aa4.35□□□□□ -1.71
FOXN3-217ENST00000557572 ANLNQ9NQW6 1124 aa4.35□□□□□ -1.71
FOXN3-217ENST00000557572 STK10O94804 968 aaKnown RBP4.34□□□□□ -1.71
FOXN3-217ENST00000557572 S100BP04271 92 aaPredicted RBP4.34□□□□□ -1.71
FOXN3-217ENST00000557572 ADCY2Q08462 1091 aa4.34□□□□□ -1.71
FOXN3-217ENST00000557572 GRM1Q13255 1194 aa4.34□□□□□ -1.71
FOXN3-217ENST00000557572 KIAA1841Q6NSI8 718 aa4.34□□□□□ -1.71
FOXN3-217ENST00000557572 TSHZ1Q6ZSZ6 1077 aa4.34□□□□□ -1.71
FOXN3-217ENST00000557572 RNF169Q8NCN4 708 aa4.34□□□□□ -1.71
FOXN3-217ENST00000557572 PIK3C3Q8NEB9 887 aa4.34□□□□□ -1.71
FOXN3-217ENST00000557572 FUBP1Q96AE4 644 aaKnown RBP4.34□□□□□ -1.71
FOXN3-217ENST00000557572 SARAFQ96BY9 339 aa4.34□□□□□ -1.71
FOXN3-217ENST00000557572 HIST1H2AHQ96KK5 128 aa4.34□□□□□ -1.71
FOXN3-217ENST00000557572 HIST1H2AJQ99878 128 aa4.34□□□□□ -1.71
FOXN3-217ENST00000557572 SPC25Q9HBM1 224 aa4.34□□□□□ -1.71
FOXN3-217ENST00000557572 PFDN2Q9UHV9 154 aa4.34□□□□□ -1.71
FOXN3-217ENST00000557572 BTBD3Q9Y2F9 522 aa4.34□□□□□ -1.71
FOXN3-217ENST00000557572 ATP11BQ9Y2G3 1177 aa4.34□□□□□ -1.71
FOXN3-217ENST00000557572 TNPO3Q9Y5L0 923 aaKnown RBP4.34□□□□□ -1.71
FOXN3-217ENST00000557572 RPS6KL1Q9Y6S9 549 aa4.34□□□□□ -1.71
FOXN3-217ENST00000557572 KDM2BQ8NHM5 1336 aa4.34□□□□□ -1.71
FOXN3-217ENST00000557572 SH3BP5O60239 455 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 PDGFRBP09619 1106 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 EVA1CP58658 441 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 KRTAP10-5P60370 271 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 DUSP2Q05923 314 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 SERINC3Q13530 473 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 LLGL1Q15334 1064 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 CCDC178Q5BJE1 867 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 METRNLQ641Q3 311 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 ANKS6Q68DC2 871 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 KIAA1161Q6NSJ0 714 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 TIGD7Q6NT04 549 aaPredicted RBP4.33□□□□□ -1.72
FOXN3-217ENST00000557572 CLEC4GQ6UXB4 293 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 C11orf96Q7Z7L8 435 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 DDX53Q86TM3 631 aaKnown RBP4.33□□□□□ -1.72
FOXN3-217ENST00000557572 RAVER1Q8IY67 606 aaKnown RBP4.33□□□□□ -1.72
FOXN3-217ENST00000557572 ZZZ3Q8IYH5 903 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 FAM9BQ8IZU0 186 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 GPATCH11Q8N954 259 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 DENND1AQ8TEH3 1009 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 JDP2Q8WYK2 163 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 MRFAP1L1Q96HT8 127 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 RPS6KC1Q96S38 1066 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 NEU1Q99519 415 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 TIMP4Q99727 224 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 MTG2Q9H4K7 406 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 PCIF1Q9H4Z3 704 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 NRIP3Q9NQ35 241 aa4.33□□□□□ -1.72
FOXN3-217ENST00000557572 H7C1D1 291 aa4.32□□□□□ -1.72
FOXN3-217ENST00000557572 BIRC2Q13490 618 aa4.32□□□□□ -1.72
FOXN3-217ENST00000557572 ZNF174Q15697 407 aa4.32□□□□□ -1.72
FOXN3-217ENST00000557572 NFE2L2Q16236 605 aa4.32□□□□□ -1.72
FOXN3-217ENST00000557572 LONRF3Q496Y0 759 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms