RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 TEPSINQ96N21 525 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 GDF15Q99988 308 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 SYT3Q9BQG1 590 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 ZNF703Q9H7S9 590 aaPredicted RBP2.19□□□□□ -2.06
HIF1A-212ENST00000557538 ATP6V0A4Q9HBG4 840 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 PNPOQ9NVS9 261 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 AURKAIP1Q9NWT8 199 aaPredicted RBP2.19□□□□□ -2.06
HIF1A-212ENST00000557538 RTEL1Q9NZ71 1219 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 DKK2Q9UBU2 259 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 OAZ3Q9UMX2 235 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 KRTAP23-1A1A580 65 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 CAPN8A6NHC0 703 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 PATE3B3GLJ2 98 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 PLIN1O60240 522 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 ITGA10O75578 1167 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 OSMP13725 252 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 ALDH5A1P51649 535 aaPredicted RBP2.19□□□□□ -2.06
HIF1A-212ENST00000557538 CDK17Q00537 523 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 RNF151Q2KHN1 245 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 DARS2Q6PI48 645 aaKnown RBP2.19□□□□□ -2.06
HIF1A-212ENST00000557538 NPNTQ6UXI9 565 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 FAM83AQ86UY5 434 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 CCDC146Q8IYE0 955 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 ZBTB34Q8NCN2 500 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 MDGA1Q8NFP4 955 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 OR10H5Q8NGA6 315 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 GCDHQ92947 438 aaPredicted RBP2.19□□□□□ -2.06
HIF1A-212ENST00000557538 APIPQ96GX9 242 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 ZSWIM3Q96MP5 696 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 ACO2Q99798 780 aaKnown RBP2.19□□□□□ -2.06
HIF1A-212ENST00000557538 AGO3Q9H9G7 860 aaKnown RBP2.19□□□□□ -2.06
HIF1A-212ENST00000557538 IL23AQ9NPF7 189 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 TMEM140Q9NV12 185 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 NR2E1Q9Y466 385 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 FRMPD2Q68DX3 1309 aaPredicted RBP2.19□□□□□ -2.06
HIF1A-212ENST00000557538 NPIPB6E9PJ23 425 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 PHGDHO43175 533 aaKnown RBP2.19□□□□□ -2.06
HIF1A-212ENST00000557538 AKR1B10O60218 316 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 CYP1A1P04798 512 aaPredicted RBP2.19□□□□□ -2.06
HIF1A-212ENST00000557538 SNRPA1P09661 255 aaKnown RBP2.19□□□□□ -2.06
HIF1A-212ENST00000557538 POU6F2P78424 691 aaPredicted RBP2.19□□□□□ -2.06
HIF1A-212ENST00000557538 LCE1DQ5T752 114 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 CXorf38Q8TB03 319 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 NMD3Q96D46 503 aaKnown RBP2.19□□□□□ -2.06
HIF1A-212ENST00000557538 CLPTM1LQ96KA5 538 aa2.19□□□□□ -2.06
HIF1A-212ENST00000557538 UNKQ9C0B0 810 aaKnown RBP2.19□□□□□ -2.06
HIF1A-212ENST00000557538 DHX36Q9H2U1 1008 aaKnown RBP2.19□□□□□ -2.06
HIF1A-212ENST00000557538 NOB1Q9ULX3 412 aaKnown RBP2.19□□□□□ -2.06
HIF1A-212ENST00000557538 PRSS29PA6NIE9 313 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 GRXCR1A8MXD5 290 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 E7ENX8 843 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 SOAT2O75908 522 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 CT47B1P0C2W7 299 aaPredicted RBP2.18□□□□□ -2.06
HIF1A-212ENST00000557538 STAT5BP51692 787 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 RHBDL3P58872 404 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 TAP2Q03519 686 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 IL10RAQ13651 578 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 KIF22Q14807 665 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 SAFBQ15424 915 aaKnown RBP eCLIP2.18□□□□□ -2.06
HIF1A-212ENST00000557538 CSRP2Q16527 193 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 RNF220Q5VTB9 566 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 APOA5Q6Q788 366 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 ANKRD35Q8N283 1001 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 PQLC1Q8N2U9 271 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 DCBLD1Q8N8Z6 715 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 IL31RAQ8NI17 732 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 PGBD4Q96DM1 585 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 NDC1Q9BTX1 674 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 EIF2AQ9BY44 585 aaKnown RBP2.18□□□□□ -2.06
HIF1A-212ENST00000557538 KRTAP4-2Q9BYR5 136 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 C22orf23Q9BZE7 217 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 MRPL46Q9H2W6 279 aaKnown RBP2.18□□□□□ -2.06
HIF1A-212ENST00000557538 CD248Q9HCU0 757 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 TDP1Q9NUW8 608 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 DDX20Q9UHI6 824 aaKnown RBP2.18□□□□□ -2.06
HIF1A-212ENST00000557538 PUF60Q9UHX1 559 aaKnown RBP2.18□□□□□ -2.06
HIF1A-212ENST00000557538 NEU2Q9Y3R4 380 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 TBKBP1A7MCY6 615 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 F2RL2O00254 374 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 TRIM24O15164 1050 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 TRIM13O60858 407 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 MGAT1P26572 445 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 PRDX5P30044 214 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 ADCY8P40145 1251 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 CASP5P51878 434 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 BPIFB4P59827 614 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 ATP2C1P98194 919 aaPredicted RBP2.18□□□□□ -2.06
HIF1A-212ENST00000557538 BTKQ06187 659 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 ZNF267Q14586 743 aaPredicted RBP2.18□□□□□ -2.06
HIF1A-212ENST00000557538 NOMO1Q15155 1222 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 UAP1L1Q3KQV9 507 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 MFSD14BQ5SR56 506 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 PRAMEF14Q5SWL7 426 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 MCTP2Q6DN12 878 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 ARMC6Q6NXE6 501 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 FAM111BQ6SJ93 734 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 ARHGEF18Q6ZSZ5 1173 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 TMPRSS9Q7Z410 1059 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 ZGPATQ8N5A5 531 aaKnown RBP2.18□□□□□ -2.06
HIF1A-212ENST00000557538 SCAMP4Q969E2 229 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms