RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 PSTPIP2Q9H939 334 aa10.6□□□□□ -0.71
NEDD1-211ENST00000557454 POLR3BQ9NW08 1133 aaPredicted RBP10.6□□□□□ -0.71
NEDD1-211ENST00000557454 ADAM28Q9UKQ2 775 aa10.6□□□□□ -0.71
NEDD1-211ENST00000557454 SLC8A2Q9UPR5 921 aa10.6□□□□□ -0.71
NEDD1-211ENST00000557454 CCDC194A0A1B0GVG4 234 aa10.59□□□□□ -0.71
NEDD1-211ENST00000557454 WDR27A2RRH5 827 aa10.59□□□□□ -0.71
NEDD1-211ENST00000557454 SPECC1L-ADORA2AF8WAN1 911 aa10.59□□□□□ -0.71
NEDD1-211ENST00000557454 GBP1P32455 592 aa10.59□□□□□ -0.71
NEDD1-211ENST00000557454 CTHP32929 405 aa10.59□□□□□ -0.71
NEDD1-211ENST00000557454 MLH1P40692 756 aa10.59□□□□□ -0.71
NEDD1-211ENST00000557454 SCNN1GP51170 649 aa10.59□□□□□ -0.71
NEDD1-211ENST00000557454 MLLT6P55198 1093 aaPredicted RBP10.59□□□□□ -0.71
NEDD1-211ENST00000557454 PSMD5Q16401 504 aa10.59□□□□□ -0.71
NEDD1-211ENST00000557454 CEP55Q53EZ4 464 aa10.59□□□□□ -0.71
NEDD1-211ENST00000557454 PRSS36Q5K4E3 855 aa10.59□□□□□ -0.71
NEDD1-211ENST00000557454 C1orf228Q6PIY5 440 aa10.59□□□□□ -0.71
NEDD1-211ENST00000557454 CYP2U1Q7Z449 544 aa10.59□□□□□ -0.71
NEDD1-211ENST00000557454 TTC8Q8TAM2 541 aa10.59□□□□□ -0.71
NEDD1-211ENST00000557454 FAM200AQ8TCP9 573 aa10.59□□□□□ -0.71
NEDD1-211ENST00000557454 HHIPQ96QV1 700 aa10.59□□□□□ -0.71
NEDD1-211ENST00000557454 GAD1Q99259 594 aa10.59□□□□□ -0.71
NEDD1-211ENST00000557454 C8orf33Q9H7E9 229 aaPredicted RBP10.59□□□□□ -0.71
NEDD1-211ENST00000557454 AVENQ9NQS1 362 aaPredicted RBP10.59□□□□□ -0.71
NEDD1-211ENST00000557454 RYDENQ9NUL5 291 aaKnown RBP10.59□□□□□ -0.71
NEDD1-211ENST00000557454 ANKRD17O75179 2603 aaKnown RBP10.59□□□□□ -0.71
NEDD1-211ENST00000557454 SPTAN1Q13813 2472 aaKnown RBP10.58□□□□□ -0.72
NEDD1-211ENST00000557454 MYBPHLA2RUH7 354 aa10.58□□□□□ -0.72
NEDD1-211ENST00000557454 ARL5CA6NH57 179 aa10.58□□□□□ -0.72
NEDD1-211ENST00000557454 NR1I2O75469 434 aa10.58□□□□□ -0.72
NEDD1-211ENST00000557454 SEMA3BQ13214 749 aa10.58□□□□□ -0.72
NEDD1-211ENST00000557454 NMIQ13287 307 aaPredicted RBP10.58□□□□□ -0.72
NEDD1-211ENST00000557454 KARSQ15046 597 aaKnown RBP10.58□□□□□ -0.72
NEDD1-211ENST00000557454 UVSSAQ2YD98 709 aa10.58□□□□□ -0.72
NEDD1-211ENST00000557454 UBXN11Q5T124 520 aa10.58□□□□□ -0.72
NEDD1-211ENST00000557454 PMS2CLQ68D20 193 aa10.58□□□□□ -0.72
NEDD1-211ENST00000557454 SYNPOQ8N3V7 929 aa10.58□□□□□ -0.72
NEDD1-211ENST00000557454 PIP4K2CQ8TBX8 421 aa10.58□□□□□ -0.72
NEDD1-211ENST00000557454 SMARCD2Q92925 531 aa10.58□□□□□ -0.72
NEDD1-211ENST00000557454 PGBD1Q96JS3 809 aa10.58□□□□□ -0.72
NEDD1-211ENST00000557454 FAM167AQ96KS9 214 aa10.58□□□□□ -0.72
NEDD1-211ENST00000557454 ZFP42Q96MM3 310 aa10.58□□□□□ -0.72
NEDD1-211ENST00000557454 ZSWIM3Q96MP5 696 aa10.58□□□□□ -0.72
NEDD1-211ENST00000557454 AGPAT5Q9NUQ2 364 aa10.58□□□□□ -0.72
NEDD1-211ENST00000557454 MIOSQ9NXC5 875 aa10.58□□□□□ -0.72
NEDD1-211ENST00000557454 GABBR1Q9UBS5 961 aa10.58□□□□□ -0.72
NEDD1-211ENST00000557454 DDX19BQ9UMR2 479 aa10.58□□□□□ -0.72
NEDD1-211ENST00000557454 SF3B1O75533 1304 aaKnown RBP eCLIP10.58□□□□□ -0.72
NEDD1-211ENST00000557454 A0A087WV48 116 aa10.57□□□□□ -0.72
NEDD1-211ENST00000557454 CCR2P41597 374 aa10.57□□□□□ -0.72
NEDD1-211ENST00000557454 ABCG1P45844 678 aa10.57□□□□□ -0.72
NEDD1-211ENST00000557454 LMAN2Q12907 356 aa10.57□□□□□ -0.72
NEDD1-211ENST00000557454 TRIM61Q5EBN2 209 aa10.57□□□□□ -0.72
NEDD1-211ENST00000557454 CEP57Q86XR8 500 aa10.57□□□□□ -0.72
NEDD1-211ENST00000557454 MFSD6LQ8IWD5 586 aa10.57□□□□□ -0.72
NEDD1-211ENST00000557454 PLEKHM2Q8IWE5 1019 aa10.57□□□□□ -0.72
NEDD1-211ENST00000557454 PNPLA1Q8N8W4 532 aa10.57□□□□□ -0.72
NEDD1-211ENST00000557454 LNX1Q8TBB1 728 aaPredicted RBP10.57□□□□□ -0.72
NEDD1-211ENST00000557454 HASPINQ8TF76 798 aa10.57□□□□□ -0.72
NEDD1-211ENST00000557454 RRP36Q96EU6 259 aaKnown RBP10.57□□□□□ -0.72
NEDD1-211ENST00000557454 CORO1BQ9BR76 489 aa10.57□□□□□ -0.72
NEDD1-211ENST00000557454 TTPALQ9BTX7 342 aa10.57□□□□□ -0.72
NEDD1-211ENST00000557454 SENP2Q9HC62 589 aa10.57□□□□□ -0.72
NEDD1-211ENST00000557454 CACNG4Q9UBN1 327 aa10.57□□□□□ -0.72
NEDD1-211ENST00000557454 SEC63Q9UGP8 760 aaKnown RBP10.57□□□□□ -0.72
NEDD1-211ENST00000557454 INVSQ9Y283 1065 aa10.57□□□□□ -0.72
NEDD1-211ENST00000557454 EML5Q05BV3 1969 aa10.56□□□□□ -0.72
NEDD1-211ENST00000557454 HEPACAM2A8MVW5 462 aa10.56□□□□□ -0.72
NEDD1-211ENST00000557454 UPK3BL1B0FP48 263 aa10.56□□□□□ -0.72
NEDD1-211ENST00000557454 UPK3BL2E5RIL1 263 aa10.56□□□□□ -0.72
NEDD1-211ENST00000557454 MEIS1O00470 390 aa10.56□□□□□ -0.72
NEDD1-211ENST00000557454 DHX15O43143 795 aaKnown RBP10.56□□□□□ -0.72
NEDD1-211ENST00000557454 TADA2AO75478 443 aa10.56□□□□□ -0.72
NEDD1-211ENST00000557454 OATP04181 439 aa10.56□□□□□ -0.72
NEDD1-211ENST00000557454 ITGA4P13612 1032 aa10.56□□□□□ -0.72
NEDD1-211ENST00000557454 ENGP17813 658 aa10.56□□□□□ -0.72
NEDD1-211ENST00000557454 PRKCEQ02156 737 aa10.56□□□□□ -0.72
NEDD1-211ENST00000557454 KCNC4Q03721 635 aa10.56□□□□□ -0.72
NEDD1-211ENST00000557454 CYB5R4Q7L1T6 521 aa10.56□□□□□ -0.72
NEDD1-211ENST00000557454 RALGPS2Q86X27 583 aaPredicted RBP10.56□□□□□ -0.72
NEDD1-211ENST00000557454 YAF2Q8IY57 180 aa10.56□□□□□ -0.72
NEDD1-211ENST00000557454 CAMKK1Q8N5S9 505 aa10.56□□□□□ -0.72
NEDD1-211ENST00000557454 SMG8Q8ND04 991 aaKnown RBP10.56□□□□□ -0.72
NEDD1-211ENST00000557454 ADAMTS14Q8WXS8 1223 aa10.56□□□□□ -0.72
NEDD1-211ENST00000557454 PIGKQ92643 395 aa10.56□□□□□ -0.72
NEDD1-211ENST00000557454 RSPRY1Q96DX4 576 aa10.56□□□□□ -0.72
NEDD1-211ENST00000557454 NLRP4Q96MN2 994 aa10.56□□□□□ -0.72
NEDD1-211ENST00000557454 KRT23Q9C075 422 aa10.56□□□□□ -0.72
NEDD1-211ENST00000557454 INO80BQ9C086 356 aaPredicted RBP10.56□□□□□ -0.72
NEDD1-211ENST00000557454 EVLQ9UI08 416 aaPredicted RBP10.56□□□□□ -0.72
NEDD1-211ENST00000557454 CHADO15335 359 aa10.55□□□□□ -0.72
NEDD1-211ENST00000557454 PPP1R37O75864 691 aa10.55□□□□□ -0.72
NEDD1-211ENST00000557454 PSAPP07602 524 aa10.55□□□□□ -0.72
NEDD1-211ENST00000557454 PTPN2P17706 415 aa10.55□□□□□ -0.72
NEDD1-211ENST00000557454 MX1P20591 662 aa10.55□□□□□ -0.72
NEDD1-211ENST00000557454 OR1D2P34982 312 aa10.55□□□□□ -0.72
NEDD1-211ENST00000557454 RAB33AQ14088 237 aa10.55□□□□□ -0.72
NEDD1-211ENST00000557454 FAM171A1Q5VUB5 890 aa10.55□□□□□ -0.72
NEDD1-211ENST00000557454 ZNF410Q86VK4 478 aa10.55□□□□□ -0.72
NEDD1-211ENST00000557454 RHPN2Q8IUC4 686 aa10.55□□□□□ -0.72
NEDD1-211ENST00000557454 KSR1Q8IVT5 923 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms