RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 PDGFBP01127 241 aaPredicted RBP15.57■□□□□ 0.08
SNX6-210ENST00000557341 SPATA31D3P0C874 917 aa15.57■□□□□ 0.08
SNX6-210ENST00000557341 MYBP10242 640 aa15.57■□□□□ 0.08
SNX6-210ENST00000557341 RPL17P18621 184 aaKnown RBP15.57■□□□□ 0.08
SNX6-210ENST00000557341 MCM2P49736 904 aa15.57■□□□□ 0.08
SNX6-210ENST00000557341 PSMD5Q16401 504 aa15.57■□□□□ 0.08
SNX6-210ENST00000557341 ZNF568Q3ZCX4 644 aa15.57■□□□□ 0.08
SNX6-210ENST00000557341 GLRA4Q5JXX5 417 aa15.57■□□□□ 0.08
SNX6-210ENST00000557341 FAM171A1Q5VUB5 890 aa15.57■□□□□ 0.08
SNX6-210ENST00000557341 PDXDC1Q6P996 788 aa15.57■□□□□ 0.08
SNX6-210ENST00000557341 PRSS55Q6UWB4 352 aaPredicted RBP15.57■□□□□ 0.08
SNX6-210ENST00000557341 SPATA31D4Q6ZUB0 917 aa15.57■□□□□ 0.08
SNX6-210ENST00000557341 ALYREFQ86V81 257 aaKnown RBP15.57■□□□□ 0.08
SNX6-210ENST00000557341 CEP57Q86XR8 500 aa15.57■□□□□ 0.08
SNX6-210ENST00000557341 DAW1Q8N136 415 aa15.57■□□□□ 0.08
SNX6-210ENST00000557341 PIK3R5Q8WYR1 880 aa15.57■□□□□ 0.08
SNX6-210ENST00000557341 MMTAG2Q9BU76 263 aaKnown RBP15.57■□□□□ 0.08
SNX6-210ENST00000557341 TIPINQ9BVW5 301 aa15.57■□□□□ 0.08
SNX6-210ENST00000557341 MRPL4Q9BYD3 311 aaKnown RBP15.57■□□□□ 0.08
SNX6-210ENST00000557341 NT5C3AQ9H0P0 336 aa15.57■□□□□ 0.08
SNX6-210ENST00000557341 CXCL16Q9H2A7 254 aa15.57■□□□□ 0.08
SNX6-210ENST00000557341 TMEM134Q9H6X4 195 aa15.57■□□□□ 0.08
SNX6-210ENST00000557341 C17orf75Q9HAS0 396 aa15.57■□□□□ 0.08
SNX6-210ENST00000557341 PIDD1Q9HB75 910 aa15.57■□□□□ 0.08
SNX6-210ENST00000557341 KMT5AQ9NQR1 393 aa15.57■□□□□ 0.08
SNX6-210ENST00000557341 TOPORSQ9NS56 1045 aaPredicted RBP15.57■□□□□ 0.08
SNX6-210ENST00000557341 ARHGAP28Q9P2N2 729 aa15.57■□□□□ 0.08
SNX6-210ENST00000557341 TCHHQ07283 1943 aa15.56■□□□□ 0.08
SNX6-210ENST00000557341 NOTCH4Q99466 2003 aa15.56■□□□□ 0.08
SNX6-210ENST00000557341 TMEM189-UBE2V1I3L0A0 370 aa15.56■□□□□ 0.08
SNX6-210ENST00000557341 CD2BP2O95400 341 aaKnown RBP15.56■□□□□ 0.08
SNX6-210ENST00000557341 AVPR2P30518 371 aa15.56■□□□□ 0.08
SNX6-210ENST00000557341 GBP2P32456 591 aaPredicted RBP15.56■□□□□ 0.08
SNX6-210ENST00000557341 GRM5P41594 1212 aa15.56■□□□□ 0.08
SNX6-210ENST00000557341 MRE11P49959 708 aa15.56■□□□□ 0.08
SNX6-210ENST00000557341 YARSP54577 528 aaKnown RBP15.56■□□□□ 0.08
SNX6-210ENST00000557341 MAPK7Q13164 816 aa15.56■□□□□ 0.08
SNX6-210ENST00000557341 TDGQ13569 410 aa15.56■□□□□ 0.08
SNX6-210ENST00000557341 ZRSR1Q15695 479 aaKnown RBP15.56■□□□□ 0.08
SNX6-210ENST00000557341 HYIQ5T013 277 aa15.56■□□□□ 0.08
SNX6-210ENST00000557341 RINT1Q6NUQ1 792 aa15.56■□□□□ 0.08
SNX6-210ENST00000557341 LILRA6Q6PI73 481 aa15.56■□□□□ 0.08
SNX6-210ENST00000557341 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.56■□□□□ 0.08
SNX6-210ENST00000557341 KCNK18Q7Z418 384 aa15.56■□□□□ 0.08
SNX6-210ENST00000557341 KCTD17Q8N5Z5 321 aa15.56■□□□□ 0.08
SNX6-210ENST00000557341 ZNF707Q96C28 371 aaPredicted RBP15.56■□□□□ 0.08
SNX6-210ENST00000557341 UROC1Q96N76 676 aa15.56■□□□□ 0.08
SNX6-210ENST00000557341 PPP1R10Q96QC0 940 aaKnown RBP15.56■□□□□ 0.08
SNX6-210ENST00000557341 ACO2Q99798 780 aaKnown RBP15.56■□□□□ 0.08
SNX6-210ENST00000557341 CCDC94Q9BW85 323 aaPredicted RBP15.56■□□□□ 0.08
SNX6-210ENST00000557341 CDT1Q9H211 546 aa15.56■□□□□ 0.08
SNX6-210ENST00000557341 IGSF9Q9P2J2 1179 aa15.56■□□□□ 0.08
SNX6-210ENST00000557341 FBXW11Q9UKB1 542 aa15.56■□□□□ 0.08
SNX6-210ENST00000557341 DUSP12Q9UNI6 340 aa15.56■□□□□ 0.08
SNX6-210ENST00000557341 RBM19Q9Y4C8 960 aaKnown RBP15.56■□□□□ 0.08
SNX6-210ENST00000557341 MYO15AQ9UKN7 3530 aa15.56■□□□□ 0.08
SNX6-210ENST00000557341 CACNA1HO95180 2353 aa15.55■□□□□ 0.08
SNX6-210ENST00000557341 VWA3AA6NCI4 1184 aa15.55■□□□□ 0.08
SNX6-210ENST00000557341 N4BP1O75113 896 aaKnown RBP15.55■□□□□ 0.08
SNX6-210ENST00000557341 ZMYND10O75800 440 aa15.55■□□□□ 0.08
SNX6-210ENST00000557341 GUCY2CP25092 1073 aa15.55■□□□□ 0.08
SNX6-210ENST00000557341 NUBP1P53384 320 aa15.55■□□□□ 0.08
SNX6-210ENST00000557341 TCF15Q12870 199 aa15.55■□□□□ 0.08
SNX6-210ENST00000557341 LIN9Q5TKA1 542 aa15.55■□□□□ 0.08
SNX6-210ENST00000557341 ARL6IP4Q66PJ3 421 aaKnown RBP15.55■□□□□ 0.08
SNX6-210ENST00000557341 C1orf186Q6ZWK4 172 aa15.55■□□□□ 0.08
SNX6-210ENST00000557341 CEP120Q8N960 986 aa15.55■□□□□ 0.08
SNX6-210ENST00000557341 LNX1Q8TBB1 728 aaPredicted RBP15.55■□□□□ 0.08
SNX6-210ENST00000557341 CDK5RAP3Q96JB5 506 aa15.55■□□□□ 0.08
SNX6-210ENST00000557341 PRKD2Q9BZL6 878 aa15.55■□□□□ 0.08
SNX6-210ENST00000557341 MFSD1Q9H3U5 465 aa15.55■□□□□ 0.08
SNX6-210ENST00000557341 KCNK12Q9HB15 430 aa15.55■□□□□ 0.08
SNX6-210ENST00000557341 SMC3Q9UQE7 1217 aa15.55■□□□□ 0.08
SNX6-210ENST00000557341 VPS13AQ96RL7 3174 aa15.55■□□□□ 0.08
SNX6-210ENST00000557341 TSC2P49815 1807 aa15.54■□□□□ 0.08
SNX6-210ENST00000557341 B3GAT3O94766 335 aa15.54■□□□□ 0.08
SNX6-210ENST00000557341 MCF2P10911 925 aa15.54■□□□□ 0.08
SNX6-210ENST00000557341 CLCNKBP51801 687 aa15.54■□□□□ 0.08
SNX6-210ENST00000557341 STRN3Q13033 797 aa15.54■□□□□ 0.08
SNX6-210ENST00000557341 MPZL3Q6UWV2 235 aa15.54■□□□□ 0.08
SNX6-210ENST00000557341 GET4Q7L5D6 327 aaPredicted RBP15.54■□□□□ 0.08
SNX6-210ENST00000557341 TAS1R3Q7RTX0 852 aa15.54■□□□□ 0.08
SNX6-210ENST00000557341 PNMA5Q96PV4 448 aa15.54■□□□□ 0.08
SNX6-210ENST00000557341 CLSTN3Q9BQT9 956 aa15.54■□□□□ 0.08
SNX6-210ENST00000557341 TARS2Q9BW92 718 aaKnown RBP15.54■□□□□ 0.08
SNX6-210ENST00000557341 GOLGA2P5Q9HBQ8 144 aa15.54■□□□□ 0.08
SNX6-210ENST00000557341 PTPRHQ9HD43 1115 aa15.54■□□□□ 0.08
SNX6-210ENST00000557341 KCND2Q9NZV8 630 aa15.54■□□□□ 0.08
SNX6-210ENST00000557341 EPS15L1Q9UBC2 864 aa15.54■□□□□ 0.08
SNX6-210ENST00000557341 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.54■□□□□ 0.08
SNX6-210ENST00000557341 SMIM28A0A1B0GU29 152 aa15.53■□□□□ 0.08
SNX6-210ENST00000557341 SLC16A4O15374 487 aa15.53■□□□□ 0.08
SNX6-210ENST00000557341 TRAPPC3O43617 180 aa15.53■□□□□ 0.08
SNX6-210ENST00000557341 HNRNPA1P09651 372 aaKnown RBP eCLIP15.53■□□□□ 0.08
SNX6-210ENST00000557341 FGFR3P22607 806 aa15.53■□□□□ 0.08
SNX6-210ENST00000557341 PROZP22891 400 aa15.53■□□□□ 0.08
SNX6-210ENST00000557341 OSTNP61366 133 aa15.53■□□□□ 0.08
SNX6-210ENST00000557341 RAD51AP2Q09MP3 1159 aa15.53■□□□□ 0.08
SNX6-210ENST00000557341 UPP1Q16831 310 aa15.53■□□□□ 0.08
SNX6-210ENST00000557341 SYT2Q8N9I0 419 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms