RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 MGARPQ8TDB4 240 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 GBP5Q96PP8 586 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 PRR12Q9ULL5 1215 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 TMX2Q9Y320 296 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 IQSEC2Q5JU85 1478 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 CREB3O43889 395 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 ZNF500O60304 480 aaPredicted RBP12.65□□□□□ -0.38
NEK9-210ENST00000557026 MFAP3LO75121 409 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 KRT31Q15323 416 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 SYTL3Q4VX76 610 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 TTC30AQ86WT1 665 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 ZNF564Q8TBZ8 553 aaPredicted RBP12.65□□□□□ -0.38
NEK9-210ENST00000557026 RFFLQ8WZ73 363 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 DPF2Q92785 391 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 ZDHHC15Q96MV8 337 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 NEUROG2Q9H2A3 272 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 GIMAP4Q9NUV9 329 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 STK39Q9UEW8 545 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 A0A087WUV0 522 aaPredicted RBP12.65□□□□□ -0.38
NEK9-210ENST00000557026 FBXO21O94952 628 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 URODP06132 367 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 DYNLT1P63172 113 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 FAM102AQ5T9C2 384 aaPredicted RBP12.65□□□□□ -0.38
NEK9-210ENST00000557026 DAGLBQ8NCG7 672 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 THG1LQ9NWX6 298 aaKnown RBP12.65□□□□□ -0.38
NEK9-210ENST00000557026 NEDD4P46934 1319 aa12.65□□□□□ -0.39
NEK9-210ENST00000557026 MYO3AQ8NEV4 1616 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 OAS2P29728 719 aaKnown RBP12.64□□□□□ -0.39
NEK9-210ENST00000557026 GTF2H1P32780 548 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 UGT3A1Q6NUS8 523 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 SLC35F6Q8N357 371 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 OR9Q1Q8NGQ5 310 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 SEZ6LQ9BYH1 1024 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 RRN3Q9NYV6 651 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 SLC30A1Q9Y6M5 507 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 SPACA6W5XKT8 324 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 HNRNPRO43390 633 aaKnown RBP12.64□□□□□ -0.39
NEK9-210ENST00000557026 GCLMP48507 274 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 CACNB1Q02641 598 aaPredicted RBP12.64□□□□□ -0.39
NEK9-210ENST00000557026 PCBP1Q15365 356 aaKnown RBP eCLIP12.64□□□□□ -0.39
NEK9-210ENST00000557026 AARS2Q5JTZ9 985 aaKnown RBP12.64□□□□□ -0.39
NEK9-210ENST00000557026 RABGAP1LQ5R372 815 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 C9orf131Q5VYM1 1079 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 ARL8AQ96BM9 186 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 ACTR5Q9H9F9 607 aaPredicted RBP12.64□□□□□ -0.39
NEK9-210ENST00000557026 CHCHD3Q9NX63 227 aaKnown RBP12.64□□□□□ -0.39
NEK9-210ENST00000557026 ZC3H11AO75152 810 aaKnown RBP eCLIP12.64□□□□□ -0.391e-6■□□□□ 9.7
NEK9-210ENST00000557026 SERPINB4P48594 390 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 DHX9Q08211 1270 aaKnown RBP12.64□□□□□ -0.39
NEK9-210ENST00000557026 PDK1Q15118 436 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 ATF7IP2Q5U623 682 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 TAF2Q6P1X5 1199 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 MFN1Q8IWA4 741 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 PGBD3Q8N328 593 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 NKX2-3Q8TAU0 364 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 PPP1R13BQ96KQ4 1090 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 ZNF512Q96ME7 567 aaPredicted RBP12.64□□□□□ -0.39
NEK9-210ENST00000557026 C7orf25Q9BPX7 421 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 SUDS3Q9H7L9 328 aaPredicted RBP12.64□□□□□ -0.39
NEK9-210ENST00000557026 PSD3Q9NYI0 1048 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 DIP2CQ9Y2E4 1556 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 EXTL3O43909 919 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 FBXW4P57775 412 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 MAP3K10Q02779 954 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 DDX53Q86TM3 631 aaKnown RBP12.64□□□□□ -0.39
NEK9-210ENST00000557026 SLC7A14Q8TBB6 771 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 VTA1Q9NP79 307 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 SMARCAL1Q9NZC9 954 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 AGAP1Q9UPQ3 857 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 PTPN22Q9Y2R2 807 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 TECPR2O15040 1411 aa12.64□□□□□ -0.39
NEK9-210ENST00000557026 IGF2BP3O00425 579 aaKnown RBP eCLIP12.63□□□□□ -0.39
NEK9-210ENST00000557026 SLC4A1P02730 911 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 NPEPPSP55786 919 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 TTLL9Q3SXZ7 439 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 NT5DC4Q86YG4 428 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 MAPK13O15264 365 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 TOM1L1O75674 476 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 ZNF135P52742 658 aaPredicted RBP12.63□□□□□ -0.39
NEK9-210ENST00000557026 MYBPC2Q14324 1141 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 CDO1Q16878 200 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 LINC00523Q86TU6 105 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 EGFL8Q99944 293 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 TSEN34Q9BSV6 310 aaKnown RBP12.63□□□□□ -0.39
NEK9-210ENST00000557026 HTATIP2Q9BUP3 242 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 TRIM55Q9BYV6 548 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 PRDM16Q9HAZ2 1276 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 L3MBTL1Q9Y468 752 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 POTECB2RU33 542 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 CASP2P42575 452 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 MDM2Q00987 491 aaPredicted RBP12.63□□□□□ -0.39
NEK9-210ENST00000557026 PRUNE1Q86TP1 453 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 LINC00116Q8NCU8 138 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 GMCL1P1Q8NEA9 526 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 CFAP36Q96G28 342 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 ECT2Q9H8V3 914 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 EPB41L5Q9HCM4 733 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 PIK3R2O00459 728 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 DNAJC6O75061 913 aa12.63□□□□□ -0.39
NEK9-210ENST00000557026 CAP2P40123 477 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms