RNA–Protein interactions for RNA: ENST00000556853.5

CNOT10-219, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 4

Gene CNOT10, Length 551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-219ENST00000556853 KARSQ15046 597 aaKnown RBP13.69□□□□□ -0.22
CNOT10-219ENST00000556853 PON2Q15165 354 aa13.69□□□□□ -0.22
CNOT10-219ENST00000556853 ZNF746Q6NUN9 644 aaPredicted RBP13.69□□□□□ -0.22
CNOT10-219ENST00000556853 RALGPS2Q86X27 583 aaPredicted RBP13.69□□□□□ -0.22
CNOT10-219ENST00000556853 CAMKK1Q8N5S9 505 aa13.69□□□□□ -0.22
CNOT10-219ENST00000556853 SMG8Q8ND04 991 aaKnown RBP13.69□□□□□ -0.22
CNOT10-219ENST00000556853 LSM14AQ8ND56 463 aaKnown RBP13.69□□□□□ -0.22
CNOT10-219ENST00000556853 SMARCD2Q92925 531 aa13.69□□□□□ -0.22
CNOT10-219ENST00000556853 TCEAL4Q96EI5 215 aa13.69□□□□□ -0.22
CNOT10-219ENST00000556853 ZSWIM3Q96MP5 696 aa13.69□□□□□ -0.22
CNOT10-219ENST00000556853 GAD1Q99259 594 aa13.69□□□□□ -0.22
CNOT10-219ENST00000556853 CHMP4BQ9H444 224 aaKnown RBP13.69□□□□□ -0.22
CNOT10-219ENST00000556853 SENP2Q9HC62 589 aa13.69□□□□□ -0.22
CNOT10-219ENST00000556853 NRBP2Q9NSY0 501 aa13.69□□□□□ -0.22
CNOT10-219ENST00000556853 SEC63Q9UGP8 760 aaKnown RBP13.69□□□□□ -0.22
CNOT10-219ENST00000556853 PCDHA10Q9Y5I2 948 aa13.69□□□□□ -0.22
CNOT10-219ENST00000556853 KALRNO60229 2985 aa13.69□□□□□ -0.22
CNOT10-219ENST00000556853 VWA8A3KMH1 1905 aa13.68□□□□□ -0.22
CNOT10-219ENST00000556853 OATP04181 439 aa13.68□□□□□ -0.22
CNOT10-219ENST00000556853 PSAPP07602 524 aa13.68□□□□□ -0.22
CNOT10-219ENST00000556853 HOXA11P31270 313 aaPredicted RBP13.68□□□□□ -0.22
CNOT10-219ENST00000556853 MLH1P40692 756 aa13.68□□□□□ -0.22
CNOT10-219ENST00000556853 PDXDC1Q6P996 788 aa13.68□□□□□ -0.22
CNOT10-219ENST00000556853 NIPA1Q7RTP0 329 aa13.68□□□□□ -0.22
CNOT10-219ENST00000556853 TICAM2Q86XR7 235 aa13.68□□□□□ -0.22
CNOT10-219ENST00000556853 SMAP1Q8IYB5 467 aaPredicted RBP13.68□□□□□ -0.22
CNOT10-219ENST00000556853 CNNM3Q8NE01 707 aa13.68□□□□□ -0.22
CNOT10-219ENST00000556853 TTPALQ9BTX7 342 aa13.68□□□□□ -0.22
CNOT10-219ENST00000556853 CLMPQ9H6B4 373 aa13.68□□□□□ -0.22
CNOT10-219ENST00000556853 TRPV4Q9HBA0 871 aa13.68□□□□□ -0.22
CNOT10-219ENST00000556853 DKK4Q9UBT3 224 aa13.68□□□□□ -0.22
CNOT10-219ENST00000556853 EVLQ9UI08 416 aaPredicted RBP13.68□□□□□ -0.22
CNOT10-219ENST00000556853 SPTA1P02549 2419 aa13.68□□□□□ -0.22
CNOT10-219ENST00000556853 ABCA7Q8IZY2 2146 aa13.67□□□□□ -0.22
CNOT10-219ENST00000556853 SF3B1O75533 1304 aaKnown RBP eCLIP13.67□□□□□ -0.223e-6■■■■■ 44.6
CNOT10-219ENST00000556853 SALL3Q9BXA9 1300 aa13.67□□□□□ -0.22
CNOT10-219ENST00000556853 A0A087WV48 116 aa13.67□□□□□ -0.22
CNOT10-219ENST00000556853 CHADO15335 359 aa13.67□□□□□ -0.22
CNOT10-219ENST00000556853 TADA2AO75478 443 aa13.67□□□□□ -0.22
CNOT10-219ENST00000556853 SMARCA1P28370 1054 aa13.67□□□□□ -0.22
CNOT10-219ENST00000556853 CCR2P41597 374 aa13.67□□□□□ -0.22
CNOT10-219ENST00000556853 LMAN2Q12907 356 aa13.67□□□□□ -0.22
CNOT10-219ENST00000556853 TARBP2Q15633 366 aaKnown RBP13.67□□□□□ -0.22
CNOT10-219ENST00000556853 PMS2CLQ68D20 193 aa13.67□□□□□ -0.22
CNOT10-219ENST00000556853 FAM200AQ8TCP9 573 aa13.67□□□□□ -0.22
CNOT10-219ENST00000556853 RABGGTAQ92696 567 aa13.67□□□□□ -0.22
CNOT10-219ENST00000556853 ZFP42Q96MM3 310 aa13.67□□□□□ -0.22
CNOT10-219ENST00000556853 RNF39Q9H2S5 420 aa13.67□□□□□ -0.22
CNOT10-219ENST00000556853 USP9XQ93008 2570 aaPredicted RBP13.67□□□□□ -0.22
CNOT10-219ENST00000556853 IGKV6-21A0A0C4DH24 114 aa13.66□□□□□ -0.22
CNOT10-219ENST00000556853 HEPACAM2A8MVW5 462 aa13.66□□□□□ -0.22
CNOT10-219ENST00000556853 IPO5O00410 1097 aaKnown RBP13.66□□□□□ -0.22
CNOT10-219ENST00000556853 ZNF197O14709 1029 aa13.66□□□□□ -0.22
CNOT10-219ENST00000556853 ATG13O75143 517 aa13.66□□□□□ -0.22
CNOT10-219ENST00000556853 OR1D2P34982 312 aa13.66□□□□□ -0.22
CNOT10-219ENST00000556853 MFAP1P55081 439 aaKnown RBP13.66□□□□□ -0.22
CNOT10-219ENST00000556853 IMMTQ16891 758 aaKnown RBP13.66□□□□□ -0.22
CNOT10-219ENST00000556853 CYP2U1Q7Z449 544 aa13.66□□□□□ -0.22
CNOT10-219ENST00000556853 CEP57Q86XR8 500 aa13.66□□□□□ -0.22
CNOT10-219ENST00000556853 RHPN2Q8IUC4 686 aa13.66□□□□□ -0.22
CNOT10-219ENST00000556853 ADAMTS14Q8WXS8 1223 aa13.66□□□□□ -0.22
CNOT10-219ENST00000556853 PGBD1Q96JS3 809 aa13.66□□□□□ -0.22
CNOT10-219ENST00000556853 CORO1BQ9BR76 489 aa13.66□□□□□ -0.22
CNOT10-219ENST00000556853 IFT122Q9HBG6 1241 aa13.66□□□□□ -0.22
CNOT10-219ENST00000556853 IPPQ9Y573 584 aa13.66□□□□□ -0.22
CNOT10-219ENST00000556853 THADAQ6YHU6 1953 aa13.65□□□□□ -0.22
CNOT10-219ENST00000556853 ARHGEF37A1IGU5 675 aa13.65□□□□□ -0.22
CNOT10-219ENST00000556853 GBP1P32455 592 aa13.65□□□□□ -0.22
CNOT10-219ENST00000556853 MAPK8P45983 427 aa13.65□□□□□ -0.22
CNOT10-219ENST00000556853 DNM2P50570 870 aa13.65□□□□□ -0.22
CNOT10-219ENST00000556853 PRKCEQ02156 737 aa13.65□□□□□ -0.22
CNOT10-219ENST00000556853 SPIRE1Q08AE8 756 aa13.65□□□□□ -0.22
CNOT10-219ENST00000556853 FCHO2Q0JRZ9 810 aa13.65□□□□□ -0.22
CNOT10-219ENST00000556853 FAM171A1Q5VUB5 890 aa13.65□□□□□ -0.22
CNOT10-219ENST00000556853 PLA2G4DQ86XP0 818 aa13.65□□□□□ -0.22
CNOT10-219ENST00000556853 KSR1Q8IVT5 923 aa13.65□□□□□ -0.22
CNOT10-219ENST00000556853 SCUBE3Q8IX30 993 aa13.65□□□□□ -0.22
CNOT10-219ENST00000556853 GSTCDQ8NEC7 633 aa13.65□□□□□ -0.22
CNOT10-219ENST00000556853 HHIPQ96QV1 700 aa13.65□□□□□ -0.22
CNOT10-219ENST00000556853 CEP89Q96ST8 783 aa13.65□□□□□ -0.22
CNOT10-219ENST00000556853 TBC1D22BQ9NU19 505 aa13.65□□□□□ -0.22
CNOT10-219ENST00000556853 POLR3BQ9NW08 1133 aaPredicted RBP13.65□□□□□ -0.22
CNOT10-219ENST00000556853 SUCLA2Q9P2R7 463 aaPredicted RBP13.65□□□□□ -0.22
CNOT10-219ENST00000556853 CFAP46Q8IYW2 2715 aa13.64□□□□□ -0.23
CNOT10-219ENST00000556853 IGLV3-22A0A075B6J6 115 aa13.64□□□□□ -0.23
CNOT10-219ENST00000556853 FAM86B1E9PN63 330 aa13.64□□□□□ -0.23
CNOT10-219ENST00000556853 IFIT3O14879 490 aaKnown RBP13.64□□□□□ -0.23
CNOT10-219ENST00000556853 MOSPD3O75425 235 aa13.64□□□□□ -0.23
CNOT10-219ENST00000556853 FAM86B2P0C5J1 330 aa13.64□□□□□ -0.23
CNOT10-219ENST00000556853 HSP90AA2PQ14568 343 aaPredicted RBP13.64□□□□□ -0.23
CNOT10-219ENST00000556853 YAF2Q8IY57 180 aa13.64□□□□□ -0.23
CNOT10-219ENST00000556853 TTC8Q8TAM2 541 aa13.64□□□□□ -0.23
CNOT10-219ENST00000556853 ZSCAN18Q8TBC5 510 aaPredicted RBP13.64□□□□□ -0.23
CNOT10-219ENST00000556853 HASPINQ8TF76 798 aa13.64□□□□□ -0.23
CNOT10-219ENST00000556853 E2F7Q96AV8 911 aa13.64□□□□□ -0.23
CNOT10-219ENST00000556853 RSPRY1Q96DX4 576 aa13.64□□□□□ -0.23
CNOT10-219ENST00000556853 NLRP4Q96MN2 994 aa13.64□□□□□ -0.23
CNOT10-219ENST00000556853 PAAF1Q9BRP4 392 aa13.64□□□□□ -0.23
CNOT10-219ENST00000556853 ANO3Q9BYT9 981 aa13.64□□□□□ -0.23
CNOT10-219ENST00000556853 CACNG4Q9UBN1 327 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms