RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 NOTCH4Q99466 2003 aa16.32■□□□□ 0.2
CHD8-211ENST00000556833 GOLGA2P5Q9HBQ8 144 aa16.32■□□□□ 0.2
CHD8-211ENST00000556833 HCFC1R1Q9NWW0 138 aa16.32■□□□□ 0.2
CHD8-211ENST00000556833 CACNA1IQ9P0X4 2223 aa16.32■□□□□ 0.2
CHD8-211ENST00000556833 WNT16Q9UBV4 365 aa16.32■□□□□ 0.2
CHD8-211ENST00000556833 ZNF292O60281 2723 aa16.32■□□□□ 0.2
CHD8-211ENST00000556833 MAPK6Q16659 721 aa16.31■□□□□ 0.2
CHD8-211ENST00000556833 CYP26C1Q6V0L0 522 aa16.31■□□□□ 0.2
CHD8-211ENST00000556833 PPP4R3CPQ6ZMV5 832 aa16.31■□□□□ 0.2
CHD8-211ENST00000556833 CCDC83Q8IWF9 413 aa16.31■□□□□ 0.2
CHD8-211ENST00000556833 LNX1Q8TBB1 728 aaPredicted RBP16.31■□□□□ 0.2
CHD8-211ENST00000556833 SLC7A14Q8TBB6 771 aa16.31■□□□□ 0.2
CHD8-211ENST00000556833 HDAC7Q8WUI4 952 aa16.31■□□□□ 0.2
CHD8-211ENST00000556833 KXD1Q9BQD3 176 aa16.31■□□□□ 0.2
CHD8-211ENST00000556833 FZD8Q9H461 694 aa16.31■□□□□ 0.2
CHD8-211ENST00000556833 TUFT1Q9NNX1 390 aa16.31■□□□□ 0.2
CHD8-211ENST00000556833 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.31■□□□□ 0.2
CHD8-211ENST00000556833 DCHS1Q96JQ0 3298 aa16.3■□□□□ 0.2
CHD8-211ENST00000556833 ANAPC15P60006 121 aa16.3■□□□□ 0.2
CHD8-211ENST00000556833 OSTNP61366 133 aa16.3■□□□□ 0.2
CHD8-211ENST00000556833 GPC5P78333 572 aa16.3■□□□□ 0.2
CHD8-211ENST00000556833 CREMQ03060 361 aa16.3■□□□□ 0.2
CHD8-211ENST00000556833 SNW1Q13573 536 aaKnown RBP16.3■□□□□ 0.2
CHD8-211ENST00000556833 ECM1Q16610 540 aa16.3■□□□□ 0.2
CHD8-211ENST00000556833 DCLRE1AQ6PJP8 1040 aa16.3■□□□□ 0.2
CHD8-211ENST00000556833 PIK3R5Q8WYR1 880 aa16.3■□□□□ 0.2
CHD8-211ENST00000556833 PRIMPOLQ96LW4 560 aa16.3■□□□□ 0.2
CHD8-211ENST00000556833 NACC1Q96RE7 527 aa16.3■□□□□ 0.2
CHD8-211ENST00000556833 HINFPQ9BQA5 517 aa16.3■□□□□ 0.2
CHD8-211ENST00000556833 ADPGKQ9BRR6 497 aa16.3■□□□□ 0.2
CHD8-211ENST00000556833 CCDC113Q9H0I3 377 aa16.3■□□□□ 0.2
CHD8-211ENST00000556833 FRYLO94915 3013 aa16.3■□□□□ 0.2
CHD8-211ENST00000556833 DMXL1Q9Y485 3027 aa16.29■□□□□ 0.2
CHD8-211ENST00000556833 ANHXE9PGG2 379 aa16.29■□□□□ 0.2
CHD8-211ENST00000556833 OR52Z1P0C646 297 aa16.29■□□□□ 0.2
CHD8-211ENST00000556833 GLULP15104 373 aa16.29■□□□□ 0.2
CHD8-211ENST00000556833 OR1D2P34982 312 aa16.29■□□□□ 0.2
CHD8-211ENST00000556833 BRCC3P46736 316 aa16.29■□□□□ 0.2
CHD8-211ENST00000556833 SAFBQ15424 915 aaKnown RBP eCLIP16.29■□□□□ 0.2
CHD8-211ENST00000556833 NAB2Q15742 525 aa16.29■□□□□ 0.2
CHD8-211ENST00000556833 RSPO2Q6UXX9 243 aaPredicted RBP16.29■□□□□ 0.2
CHD8-211ENST00000556833 CEP120Q8N960 986 aa16.29■□□□□ 0.2
CHD8-211ENST00000556833 RHOBTB2Q9BYZ6 727 aa16.29■□□□□ 0.2
CHD8-211ENST00000556833 C2orf40Q9H1Z8 148 aa16.29■□□□□ 0.2
CHD8-211ENST00000556833 CDH7Q9ULB5 785 aa16.29■□□□□ 0.2
CHD8-211ENST00000556833 SIT1Q9Y3P8 196 aa16.29■□□□□ 0.2
CHD8-211ENST00000556833 CITO14578 2027 aa16.28■□□□□ 0.2
CHD8-211ENST00000556833 B3GAT3O94766 335 aa16.28■□□□□ 0.2
CHD8-211ENST00000556833 XRCC6P12956 609 aaKnown RBP eCLIP16.28■□□□□ 0.2
CHD8-211ENST00000556833 CYP11B2P19099 503 aa16.28■□□□□ 0.2
CHD8-211ENST00000556833 CD72P21854 359 aa16.28■□□□□ 0.2
CHD8-211ENST00000556833 TKTP29401 623 aaKnown RBP16.28■□□□□ 0.2
CHD8-211ENST00000556833 CCT6AP40227 531 aaKnown RBP16.28■□□□□ 0.2
CHD8-211ENST00000556833 CLCNKBP51801 687 aa16.28■□□□□ 0.2
CHD8-211ENST00000556833 FAM187BQ17R55 369 aa16.28■□□□□ 0.2
CHD8-211ENST00000556833 AXDND1Q5T1B0 1012 aaPredicted RBP16.28■□□□□ 0.2
CHD8-211ENST00000556833 NT5DC1Q5TFE4 455 aa16.28■□□□□ 0.2
CHD8-211ENST00000556833 KIAA2013Q8IYS2 634 aa16.28■□□□□ 0.2
CHD8-211ENST00000556833 ERMNQ8TAM6 284 aa16.28■□□□□ 0.2
CHD8-211ENST00000556833 FGF13Q92913 245 aa16.28■□□□□ 0.2
CHD8-211ENST00000556833 C8orf76Q96K31 380 aa16.28■□□□□ 0.2
CHD8-211ENST00000556833 POLR3CQ9BUI4 534 aaPredicted RBP16.28■□□□□ 0.2
CHD8-211ENST00000556833 BHMT2Q9H2M3 363 aa16.28■□□□□ 0.2
CHD8-211ENST00000556833 CDY1Q9Y6F8 540 aa16.28■□□□□ 0.2
CHD8-211ENST00000556833 PATJQ8NI35 1801 aa16.28■□□□□ 0.2
CHD8-211ENST00000556833 FANCMQ8IYD8 2048 aa16.28■□□□□ 0.2
CHD8-211ENST00000556833 ZMYM2Q9UBW7 1377 aa16.27■□□□□ 0.2
CHD8-211ENST00000556833 ACKR2O00590 384 aa16.27■□□□□ 0.2
CHD8-211ENST00000556833 NEFLP07196 543 aa16.27■□□□□ 0.2
CHD8-211ENST00000556833 HARSP12081 509 aaKnown RBP16.27■□□□□ 0.2
CHD8-211ENST00000556833 NAMPTP43490 491 aa16.27■□□□□ 0.2
CHD8-211ENST00000556833 ID4P47928 161 aa16.27■□□□□ 0.2
CHD8-211ENST00000556833 ARPP19P56211 112 aa16.27■□□□□ 0.2
CHD8-211ENST00000556833 GNL2Q13823 731 aaKnown RBP16.27■□□□□ 0.2
CHD8-211ENST00000556833 UBXN2BQ14CS0 331 aa16.27■□□□□ 0.2
CHD8-211ENST00000556833 TTC38Q5R3I4 469 aa16.27■□□□□ 0.2
CHD8-211ENST00000556833 ATF7IP2Q5U623 682 aa16.27■□□□□ 0.2
CHD8-211ENST00000556833 C3orf58Q8NDZ4 430 aa16.27■□□□□ 0.2
CHD8-211ENST00000556833 PJA1Q8NG27 643 aa16.27■□□□□ 0.2
CHD8-211ENST00000556833 NXPE3Q969Y0 559 aa16.27■□□□□ 0.2
CHD8-211ENST00000556833 IFT74Q96LB3 600 aa16.27■□□□□ 0.2
CHD8-211ENST00000556833 MTF2Q9Y483 593 aaPredicted RBP16.27■□□□□ 0.2
CHD8-211ENST00000556833 MYH11P35749 1972 aa16.27■□□□□ 0.19
CHD8-211ENST00000556833 CCDC169A6NNP5 214 aa16.26■□□□□ 0.19
CHD8-211ENST00000556833 XYLBO75191 536 aa16.26■□□□□ 0.19
CHD8-211ENST00000556833 SEC24BO95487 1268 aa16.26■□□□□ 0.19
CHD8-211ENST00000556833 LMNAP02545 664 aaKnown RBP16.26■□□□□ 0.19
CHD8-211ENST00000556833 HNRNPA1P09651 372 aaKnown RBP eCLIP16.26■□□□□ 0.19
CHD8-211ENST00000556833 SP9P0CG40 484 aa16.26■□□□□ 0.19
CHD8-211ENST00000556833 RPA1P27694 616 aa16.26■□□□□ 0.19
CHD8-211ENST00000556833 SOX4Q06945 474 aaPredicted RBP16.26■□□□□ 0.19
CHD8-211ENST00000556833 PABPC1LQ4VXU2 614 aaKnown RBP16.26■□□□□ 0.19
CHD8-211ENST00000556833 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.26■□□□□ 0.19
CHD8-211ENST00000556833 TMEM130Q8N3G9 435 aa16.26■□□□□ 0.19
CHD8-211ENST00000556833 MCRS1Q96EZ8 462 aa16.26■□□□□ 0.19
CHD8-211ENST00000556833 SLC2A4RGQ9NR83 387 aa16.26■□□□□ 0.19
CHD8-211ENST00000556833 DLGAP2Q9P1A6 1054 aa16.26■□□□□ 0.19
CHD8-211ENST00000556833 DNMT3BQ9UBC3 853 aaKnown RBP16.26■□□□□ 0.19
CHD8-211ENST00000556833 KIAA1024Q9UPX6 916 aa16.26■□□□□ 0.19
CHD8-211ENST00000556833 PP2D1A8MPX8 630 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms