RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 CEP85Q6P2H3 762 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 ABHD17CQ6PCB6 329 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 ZNF790Q6PG37 636 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 BORAQ6PGQ7 559 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 HHIPL2Q6UWX4 724 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 FAM124AQ86V42 546 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 PASD1Q8IV76 773 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 CISD2Q8N5K1 135 aaKnown RBP6.01□□□□□ -1.45
SRP54-211ENST00000556445 IGDCC4Q8TDY8 1250 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 DNAAF4Q8WXU2 420 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 CHMP4CQ96CF2 233 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 MAGEB10Q96LZ2 347 aaPredicted RBP6.01□□□□□ -1.45
SRP54-211ENST00000556445 RBM15Q96T37 977 aaKnown RBP eCLIP6.01□□□□□ -1.45
SRP54-211ENST00000556445 KRTAP9-3Q9BYQ3 159 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 CELF4Q9BZC1 486 aaKnown RBP6.01□□□□□ -1.45
SRP54-211ENST00000556445 SLC39A2Q9NP94 309 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 DDX21Q9NR30 783 aaKnown RBP eCLIP6.01□□□□□ -1.45
SRP54-211ENST00000556445 RIC8BQ9NVN3 520 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 OBP2AQ9NY56 170 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 ARHGAP20Q9P2F6 1191 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 FTSJ1Q9UET6 329 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 GTF2A1LQ9UNN4 478 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 COQ6Q9Y2Z9 468 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 ABCA3Q99758 1704 aa6.01□□□□□ -1.45
SRP54-211ENST00000556445 COL5A2P05997 1499 aaPredicted RBP6.01□□□□□ -1.45
SRP54-211ENST00000556445 ATP10DQ9P241 1426 aa6□□□□□ -1.45
SRP54-211ENST00000556445 MEGF6O75095 1541 aa6□□□□□ -1.45
SRP54-211ENST00000556445 CLASP2O75122 1294 aaKnown RBP6□□□□□ -1.45
SRP54-211ENST00000556445 ZRANB2O95218 330 aaKnown RBP eCLIP6□□□□□ -1.45
SRP54-211ENST00000556445 PLATP00750 562 aa6□□□□□ -1.45
SRP54-211ENST00000556445 ITGB3P05106 788 aa6□□□□□ -1.45
SRP54-211ENST00000556445 PTMAP06454 111 aaKnown RBP6□□□□□ -1.45
SRP54-211ENST00000556445 SNRPA1P09661 255 aaKnown RBP6□□□□□ -1.45
SRP54-211ENST00000556445 GJA4P35212 333 aa6□□□□□ -1.45
SRP54-211ENST00000556445 NEK3P51956 506 aa6□□□□□ -1.45
SRP54-211ENST00000556445 ATP8B2P98198 1209 aa6□□□□□ -1.45
SRP54-211ENST00000556445 NEXNQ0ZGT2 675 aa6□□□□□ -1.45
SRP54-211ENST00000556445 EFEMP1Q12805 493 aa6□□□□□ -1.45
SRP54-211ENST00000556445 PICALMQ13492 652 aa6□□□□□ -1.45
SRP54-211ENST00000556445 BECN1Q14457 450 aa6□□□□□ -1.45
SRP54-211ENST00000556445 TBC1D10BQ4KMP7 808 aaPredicted RBP6□□□□□ -1.45
SRP54-211ENST00000556445 ANO1Q5XXA6 986 aa6□□□□□ -1.45
SRP54-211ENST00000556445 CASC1Q6TDU7 716 aa6□□□□□ -1.45
SRP54-211ENST00000556445 G2E3Q7L622 706 aa6□□□□□ -1.45
SRP54-211ENST00000556445 OVCH1Q7RTY7 1134 aa6□□□□□ -1.45
SRP54-211ENST00000556445 NOSTRINQ8IVI9 506 aa6□□□□□ -1.45
SRP54-211ENST00000556445 CPXCR1Q8N123 301 aa6□□□□□ -1.45
SRP54-211ENST00000556445 KLHL36Q8N4N3 616 aa6□□□□□ -1.45
SRP54-211ENST00000556445 STPG3Q8N7X2 389 aa6□□□□□ -1.45
SRP54-211ENST00000556445 ENAHQ8N8S7 591 aaPredicted RBP6□□□□□ -1.45
SRP54-211ENST00000556445 CCDC89Q8N998 374 aa6□□□□□ -1.45
SRP54-211ENST00000556445 ANKRD42Q8N9B4 389 aa6□□□□□ -1.45
SRP54-211ENST00000556445 PJA1Q8NG27 643 aa6□□□□□ -1.45
SRP54-211ENST00000556445 STRBPQ96SI9 672 aaKnown RBP6□□□□□ -1.45
SRP54-211ENST00000556445 MEIS3Q99687 375 aa6□□□□□ -1.45
SRP54-211ENST00000556445 SMAD5Q99717 465 aaKnown RBP6□□□□□ -1.45
SRP54-211ENST00000556445 SARGQ9BW04 601 aa6□□□□□ -1.45
SRP54-211ENST00000556445 RSPH9Q9H1X1 276 aaPredicted RBP6□□□□□ -1.45
SRP54-211ENST00000556445 AASDHPPTQ9NRN7 309 aa6□□□□□ -1.45
SRP54-211ENST00000556445 USP25Q9UHP3 1055 aa6□□□□□ -1.45
SRP54-211ENST00000556445 CNOT11Q9UKZ1 510 aaKnown RBP6□□□□□ -1.45
SRP54-211ENST00000556445 COL14A1Q05707 1796 aaKnown RBP6□□□□□ -1.45
SRP54-211ENST00000556445 PLD2O14939 933 aa5.99□□□□□ -1.45
SRP54-211ENST00000556445 CYP27B1O15528 508 aa5.99□□□□□ -1.45
SRP54-211ENST00000556445 TOM1O60784 492 aa5.99□□□□□ -1.45
SRP54-211ENST00000556445 NBPF7P0C2Y1 421 aaPredicted RBP5.99□□□□□ -1.45
SRP54-211ENST00000556445 NFATC3Q12968 1075 aa5.99□□□□□ -1.45
SRP54-211ENST00000556445 STRA8Q7Z7C7 330 aa5.99□□□□□ -1.45
SRP54-211ENST00000556445 LINS1Q8NG48 757 aa5.99□□□□□ -1.45
SRP54-211ENST00000556445 SNRNP27Q8WVK2 155 aaKnown RBP5.99□□□□□ -1.45
SRP54-211ENST00000556445 CLUHP3Q96NS8 147 aa5.99□□□□□ -1.45
SRP54-211ENST00000556445 HERPUD2Q9BSE4 406 aa5.99□□□□□ -1.45
SRP54-211ENST00000556445 SSBP3Q9BWW4 388 aaPredicted RBP5.99□□□□□ -1.45
SRP54-211ENST00000556445 TEX13AQ9BXU3 409 aaPredicted RBP5.99□□□□□ -1.45
SRP54-211ENST00000556445 SLC5A4Q9NY91 659 aa5.99□□□□□ -1.45
SRP54-211ENST00000556445 BTBD7Q9P203 1132 aa5.99□□□□□ -1.45
SRP54-211ENST00000556445 ZNF180Q9UJW8 692 aa5.99□□□□□ -1.45
SRP54-211ENST00000556445 ADAM29Q9UKF5 820 aa5.99□□□□□ -1.45
SRP54-211ENST00000556445 COL22A1Q8NFW1 1626 aaPredicted RBP5.99□□□□□ -1.45
SRP54-211ENST00000556445 KDM6AO15550 1401 aaPredicted RBP5.99□□□□□ -1.45
SRP54-211ENST00000556445 ROBO1Q9Y6N7 1651 aa5.98□□□□□ -1.45
SRP54-211ENST00000556445 DYTNA2CJ06 578 aa5.98□□□□□ -1.45
SRP54-211ENST00000556445 PI4KAP2A4QPH2 592 aa5.98□□□□□ -1.45
SRP54-211ENST00000556445 RASSF10A6NK89 507 aa5.98□□□□□ -1.45
SRP54-211ENST00000556445 VSTM5A8MXK1 200 aa5.98□□□□□ -1.45
SRP54-211ENST00000556445 K7ESM1 405 aa5.98□□□□□ -1.45
SRP54-211ENST00000556445 ABLIM3O94929 683 aa5.98□□□□□ -1.45
SRP54-211ENST00000556445 FBXO21O94952 628 aa5.98□□□□□ -1.45
SRP54-211ENST00000556445 CPEP16870 476 aa5.98□□□□□ -1.45
SRP54-211ENST00000556445 AOAHP28039 575 aa5.98□□□□□ -1.45
SRP54-211ENST00000556445 SERPINB3P29508 390 aa5.98□□□□□ -1.45
SRP54-211ENST00000556445 HALP42357 657 aa5.98□□□□□ -1.45
SRP54-211ENST00000556445 ITKQ08881 620 aa5.98□□□□□ -1.45
SRP54-211ENST00000556445 CCDC93Q567U6 631 aa5.98□□□□□ -1.45
SRP54-211ENST00000556445 BEND3Q5T5X7 828 aa5.98□□□□□ -1.45
SRP54-211ENST00000556445 Q6ZUG5 572 aa5.98□□□□□ -1.45
SRP54-211ENST00000556445 PRRT2Q7Z6L0 340 aaPredicted RBP5.98□□□□□ -1.45
SRP54-211ENST00000556445 ZBTB46Q86UZ6 589 aa5.98□□□□□ -1.45
SRP54-211ENST00000556445 KBTBD2Q8IY47 623 aa5.98□□□□□ -1.45
SRP54-211ENST00000556445 PI4KAP1Q8N8J0 262 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms