RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.26■□□□□ 0.03
VIPAS39-208ENST00000556412 LACTBL1A8MY62 500 aa15.26■□□□□ 0.03
VIPAS39-208ENST00000556412 MEFVO15553 781 aaPredicted RBP15.26■□□□□ 0.03
VIPAS39-208ENST00000556412 AKAP3O75969 853 aa15.26■□□□□ 0.03
VIPAS39-208ENST00000556412 ADRB2P07550 413 aa15.26■□□□□ 0.03
VIPAS39-208ENST00000556412 MYBPC2Q14324 1141 aa15.26■□□□□ 0.03
VIPAS39-208ENST00000556412 HSP90AA2PQ14568 343 aaPredicted RBP15.26■□□□□ 0.03
VIPAS39-208ENST00000556412 CREBRFQ8IUR6 639 aa15.26■□□□□ 0.03
VIPAS39-208ENST00000556412 BRSK2Q8IWQ3 736 aa15.26■□□□□ 0.03
VIPAS39-208ENST00000556412 FAM186BQ8IYM0 893 aa15.26■□□□□ 0.03
VIPAS39-208ENST00000556412 SRRTQ9BXP5 876 aaKnown RBP15.26■□□□□ 0.03
VIPAS39-208ENST00000556412 NAT10Q9H0A0 1025 aaKnown RBP15.26■□□□□ 0.03
VIPAS39-208ENST00000556412 HCSTQ9UBK5 93 aa15.26■□□□□ 0.03
VIPAS39-208ENST00000556412 MYH11P35749 1972 aa15.25■□□□□ 0.03
VIPAS39-208ENST00000556412 DLATP10515 647 aaKnown RBP15.25■□□□□ 0.03
VIPAS39-208ENST00000556412 EPB41P11171 864 aaKnown RBP15.25■□□□□ 0.03
VIPAS39-208ENST00000556412 PSMC2P35998 433 aaKnown RBP15.25■□□□□ 0.03
VIPAS39-208ENST00000556412 PBX2P40425 430 aa15.25■□□□□ 0.03
VIPAS39-208ENST00000556412 NFIL3Q16649 462 aa15.25■□□□□ 0.03
VIPAS39-208ENST00000556412 LRRC43Q8N309 656 aa15.25■□□□□ 0.03
VIPAS39-208ENST00000556412 KIF12Q96FN5 646 aa15.25■□□□□ 0.03
VIPAS39-208ENST00000556412 FBXL18Q96ME1 805 aa15.25■□□□□ 0.03
VIPAS39-208ENST00000556412 FAM193BQ96PV7 902 aaPredicted RBP15.25■□□□□ 0.03
VIPAS39-208ENST00000556412 MED15Q96RN5 788 aa15.25■□□□□ 0.03
VIPAS39-208ENST00000556412 FUCA2Q9BTY2 467 aa15.25■□□□□ 0.03
VIPAS39-208ENST00000556412 MRPL9Q9BYD2 267 aaKnown RBP15.25■□□□□ 0.03
VIPAS39-208ENST00000556412 PLEKHA5Q9HAU0 1116 aa15.25■□□□□ 0.03
VIPAS39-208ENST00000556412 PDE11AQ9HCR9 933 aa15.25■□□□□ 0.03
VIPAS39-208ENST00000556412 TBC1D13Q9NVG8 400 aa15.25■□□□□ 0.03
VIPAS39-208ENST00000556412 MIOSQ9NXC5 875 aa15.25■□□□□ 0.03
VIPAS39-208ENST00000556412 PLAGL2Q9UPG8 496 aa15.25■□□□□ 0.03
VIPAS39-208ENST00000556412 SMIM28A0A1B0GU29 152 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 TTC26A0AVF1 554 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 LCHNA4D1U4 455 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 PTGESO14684 152 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 IL18RAPO95256 599 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 THP07101 528 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 WNT7BP56706 349 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 HTRA4P83105 476 aaPredicted RBP15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 CYP24A1Q07973 514 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 CCDC40Q4G0X9 1142 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 HSP90AA4PQ58FG1 418 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 JADE1Q6IE81 842 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 LRRC55Q6ZSA7 311 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 CMTR2Q8IYT2 770 aaKnown RBP15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 ZNF689Q96CS4 500 aaPredicted RBP15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 FNBP1Q96RU3 617 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 CNTN3Q9P232 1028 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 KANSL3Q9P2N6 904 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 ZC3H11AO75152 810 aaKnown RBP eCLIP15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 CA3P07451 260 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 NFICP08651 508 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 KRT13P13646 458 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 TFAMQ00059 246 aaKnown RBP15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 GRIK3Q13003 919 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 CT47A1Q5JQC4 288 aaPredicted RBP15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 LMBRD2Q68DH5 695 aaPredicted RBP15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 FIBCD1Q8N539 461 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 GSTCDQ8NEC7 633 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 CEP63Q96MT8 703 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 ZMAT2Q96NC0 199 aaKnown RBP15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 PBX4Q9BYU1 374 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 RC3H2Q9HBD1 1191 aaKnown RBP15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 MSRAQ9UJ68 235 aa15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 MRPL42Q9Y6G3 142 aaKnown RBP15.24■□□□□ 0.03
VIPAS39-208ENST00000556412 FGFR1OPO95684 399 aaKnown RBP15.23■□□□□ 0.03
VIPAS39-208ENST00000556412 ZNF165P49910 485 aa15.23■□□□□ 0.03
VIPAS39-208ENST00000556412 TMEM132DQ14C87 1099 aa15.23■□□□□ 0.03
VIPAS39-208ENST00000556412 ALKAL1Q6UXT8 129 aa15.23■□□□□ 0.03
VIPAS39-208ENST00000556412 ZNF280BQ86YH2 543 aa15.23■□□□□ 0.03
VIPAS39-208ENST00000556412 CD302Q8IX05 232 aa15.23■□□□□ 0.03
VIPAS39-208ENST00000556412 AOPEPQ8N6M6 819 aa15.23■□□□□ 0.03
VIPAS39-208ENST00000556412 TMEM174Q8WUU8 243 aa15.23■□□□□ 0.03
VIPAS39-208ENST00000556412 C18orf25Q96B23 403 aaPredicted RBP15.23■□□□□ 0.03
VIPAS39-208ENST00000556412 FAM84AQ96KN4 292 aa15.23■□□□□ 0.03
VIPAS39-208ENST00000556412 POP1Q99575 1024 aaKnown RBP15.23■□□□□ 0.03
VIPAS39-208ENST00000556412 ASB7Q9H672 318 aa15.23■□□□□ 0.03
VIPAS39-208ENST00000556412 YBX2Q9Y2T7 364 aaKnown RBP15.23■□□□□ 0.03
VIPAS39-208ENST00000556412 NFE2L3Q9Y4A8 694 aa15.23■□□□□ 0.03
VIPAS39-208ENST00000556412 PCDHA11Q9Y5I1 949 aa15.23■□□□□ 0.03
VIPAS39-208ENST00000556412 CASTOR2A6NHX0 329 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 SLC16A3O15427 465 aaKnown RBP15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 KCNE1P15382 129 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 TNNI1P19237 187 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 PBX3P40426 434 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 MYL5Q02045 173 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 PSMD6Q15008 389 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 RAB30Q15771 203 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 XKR4Q5GH76 650 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 DCAF17Q5H9S7 520 aaPredicted RBP15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 TCERG1LQ5VWI1 586 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 SPATA1Q5VX52 437 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 FOXR2Q6PJQ5 311 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 ZC3H3Q8IXZ2 948 aaKnown RBP15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 RABGGTAQ92696 567 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 NKX2-4Q9H2Z4 354 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 MMRN2Q9H8L6 949 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 GOLGA2P5Q9HBQ8 144 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 CACNG4Q9UBN1 327 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 TUBGCP4Q9UGJ1 667 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms