RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 GPR158Q5T848 1215 aa4.99□□□□□ -1.61
SCFD1-218ENST00000556256 FAM43AQ8N2R8 423 aa4.99□□□□□ -1.61
SCFD1-218ENST00000556256 DDB2Q92466 427 aa4.99□□□□□ -1.61
SCFD1-218ENST00000556256 PTCD3Q96EY7 689 aaKnown RBP4.99□□□□□ -1.61
SCFD1-218ENST00000556256 BRIP1Q9BX63 1249 aa4.99□□□□□ -1.61
SCFD1-218ENST00000556256 ANO3Q9BYT9 981 aa4.99□□□□□ -1.61
SCFD1-218ENST00000556256 PRDM12Q9H4Q4 367 aa4.99□□□□□ -1.61
SCFD1-218ENST00000556256 PPP2R3BQ9Y5P8 575 aa4.99□□□□□ -1.61
SCFD1-218ENST00000556256 CCDC78A2IDD5 438 aa4.98□□□□□ -1.61
SCFD1-218ENST00000556256 ZNF891A8MT65 544 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-218ENST00000556256 PPP1R12AO14974 1030 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-218ENST00000556256 ADCY6O43306 1168 aa4.98□□□□□ -1.61
SCFD1-218ENST00000556256 CRHR1P34998 444 aa4.98□□□□□ -1.61
SCFD1-218ENST00000556256 ZNF610Q8N9Z0 462 aa4.98□□□□□ -1.61
SCFD1-218ENST00000556256 OR14C36Q8NHC7 312 aa4.98□□□□□ -1.61
SCFD1-218ENST00000556256 DPF1Q92782 380 aa4.98□□□□□ -1.61
SCFD1-218ENST00000556256 CELA2AP08217 269 aa4.97□□□□□ -1.61
SCFD1-218ENST00000556256 SNRPA1P09661 255 aaKnown RBP4.97□□□□□ -1.61
SCFD1-218ENST00000556256 FGFR4P22455 802 aa4.97□□□□□ -1.61
SCFD1-218ENST00000556256 MANFP55145 182 aaKnown RBP4.97□□□□□ -1.61
SCFD1-218ENST00000556256 KRTAP10-6P60371 365 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-218ENST00000556256 REPS2Q8NFH8 660 aa4.97□□□□□ -1.61
SCFD1-218ENST00000556256 FUBP3Q96I24 572 aaKnown RBP eCLIP4.97□□□□□ -1.61
SCFD1-218ENST00000556256 UROC1Q96N76 676 aa4.97□□□□□ -1.61
SCFD1-218ENST00000556256 HEPHQ9BQS7 1158 aa4.97□□□□□ -1.61
SCFD1-218ENST00000556256 WNT8AQ9H1J5 351 aa4.97□□□□□ -1.61
SCFD1-218ENST00000556256 RNPEPQ9H4A4 650 aa4.97□□□□□ -1.61
SCFD1-218ENST00000556256 KCTD5Q9NXV2 234 aa4.97□□□□□ -1.61
SCFD1-218ENST00000556256 DMTF1Q9Y222 760 aa4.97□□□□□ -1.61
SCFD1-218ENST00000556256 AATKQ6ZMQ8 1374 aa4.96□□□□□ -1.62
SCFD1-218ENST00000556256 WNT10BO00744 389 aa4.96□□□□□ -1.62
SCFD1-218ENST00000556256 PTPN7P35236 360 aa4.96□□□□□ -1.62
SCFD1-218ENST00000556256 KPNA1P52294 538 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-218ENST00000556256 RAP2BP61225 183 aa4.96□□□□□ -1.62
SCFD1-218ENST00000556256 PHC1P78364 1004 aa4.96□□□□□ -1.62
SCFD1-218ENST00000556256 HSD11B2P80365 405 aa4.96□□□□□ -1.62
SCFD1-218ENST00000556256 SQSTM1Q13501 440 aa4.96□□□□□ -1.62
SCFD1-218ENST00000556256 CYP2A13Q16696 494 aa4.96□□□□□ -1.62
SCFD1-218ENST00000556256 ZNF480Q8WV37 535 aa4.96□□□□□ -1.62
SCFD1-218ENST00000556256 ARMC5Q96C12 935 aa4.96□□□□□ -1.62
SCFD1-218ENST00000556256 TIMP4Q99727 224 aa4.96□□□□□ -1.62
SCFD1-218ENST00000556256 REXO4Q9GZR2 422 aaKnown RBP4.96□□□□□ -1.62
SCFD1-218ENST00000556256 UNKLQ9H9P5 680 aaKnown RBP4.96□□□□□ -1.62
SCFD1-218ENST00000556256 MAGEC2Q9UBF1 373 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-218ENST00000556256 ATRNL1Q5VV63 1379 aa4.95□□□□□ -1.62
SCFD1-218ENST00000556256 KPNA6O60684 536 aa4.95□□□□□ -1.62
SCFD1-218ENST00000556256 GPANK1O95872 356 aa4.95□□□□□ -1.62
SCFD1-218ENST00000556256 POU3F3P20264 500 aaPredicted RBP4.95□□□□□ -1.62
SCFD1-218ENST00000556256 LSP1P33241 339 aa4.95□□□□□ -1.62
SCFD1-218ENST00000556256 TERF2Q15554 542 aa4.95□□□□□ -1.62
SCFD1-218ENST00000556256 KIAA1614Q5VZ46 1190 aa4.95□□□□□ -1.62
SCFD1-218ENST00000556256 FRMD7Q6ZUT3 714 aa4.95□□□□□ -1.62
SCFD1-218ENST00000556256 PTF1AQ7RTS3 328 aa4.95□□□□□ -1.62
SCFD1-218ENST00000556256 THNSL2Q86YJ6 484 aa4.95□□□□□ -1.62
SCFD1-218ENST00000556256 LNX2Q8N448 690 aa4.95□□□□□ -1.62
SCFD1-218ENST00000556256 ZBTB9Q96C00 473 aa4.95□□□□□ -1.62
SCFD1-218ENST00000556256 KCNG1Q9UIX4 513 aa4.95□□□□□ -1.62
SCFD1-218ENST00000556256 KCNE5Q9UJ90 142 aa4.95□□□□□ -1.62
SCFD1-218ENST00000556256 CDY2AQ9Y6F7 541 aa4.95□□□□□ -1.62
SCFD1-218ENST00000556256 RPTORQ8N122 1335 aa4.95□□□□□ -1.62
SCFD1-218ENST00000556256 MANSC4A6NHS7 340 aaPredicted RBP4.94□□□□□ -1.62
SCFD1-218ENST00000556256 KCNAB3O43448 404 aa4.94□□□□□ -1.62
SCFD1-218ENST00000556256 RFPL3O75679 317 aa4.94□□□□□ -1.62
SCFD1-218ENST00000556256 PRSS23O95084 383 aa4.94□□□□□ -1.62
SCFD1-218ENST00000556256 HOXB6P17509 224 aaKnown RBP4.94□□□□□ -1.62
SCFD1-218ENST00000556256 NEK4P51957 841 aa4.94□□□□□ -1.62
SCFD1-218ENST00000556256 VAV2P52735 878 aa4.94□□□□□ -1.62
SCFD1-218ENST00000556256 PABPC4Q13310 644 aaKnown RBP eCLIP4.94□□□□□ -1.623e-10■■■□□ 16.3
SCFD1-218ENST00000556256 GPR162Q16538 588 aa4.94□□□□□ -1.62
SCFD1-218ENST00000556256 SRSF7Q16629 238 aaKnown RBP eCLIP4.94□□□□□ -1.62
SCFD1-218ENST00000556256 PITRM1Q5JRX3 1037 aa4.94□□□□□ -1.62
SCFD1-218ENST00000556256 RRP12Q5JTH9 1297 aaKnown RBP4.94□□□□□ -1.62
SCFD1-218ENST00000556256 ZNF572Q7Z3I7 529 aaPredicted RBP4.94□□□□□ -1.62
SCFD1-218ENST00000556256 PDPRQ8NCN5 879 aa4.94□□□□□ -1.62
SCFD1-218ENST00000556256 WASF1Q92558 559 aa4.94□□□□□ -1.62
SCFD1-218ENST00000556256 CPNE5Q9HCH3 593 aa4.94□□□□□ -1.62
SCFD1-218ENST00000556256 USP25Q9UHP3 1055 aa4.94□□□□□ -1.62
SCFD1-218ENST00000556256 FAM83GA6ND36 823 aa4.93□□□□□ -1.62
SCFD1-218ENST00000556256 ALOX15P16050 662 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-218ENST00000556256 GCSHP23434 173 aa4.93□□□□□ -1.62
SCFD1-218ENST00000556256 LGALS4P56470 323 aa4.93□□□□□ -1.62
SCFD1-218ENST00000556256 TRMT2AQ8IZ69 625 aaKnown RBP4.93□□□□□ -1.62
SCFD1-218ENST00000556256 SMC1BQ8NDV3 1235 aa4.93□□□□□ -1.62
SCFD1-218ENST00000556256 FBXO18Q8NFZ0 1043 aa4.93□□□□□ -1.62
SCFD1-218ENST00000556256 SARAFQ96BY9 339 aa4.93□□□□□ -1.62
SCFD1-218ENST00000556256 SPTLC3Q9NUV7 552 aa4.93□□□□□ -1.62
SCFD1-218ENST00000556256 ENTPD2Q9Y5L3 495 aa4.93□□□□□ -1.62
SCFD1-218ENST00000556256 PEX1O43933 1283 aa4.92□□□□□ -1.62
SCFD1-218ENST00000556256 LPLP06858 475 aa4.92□□□□□ -1.62
SCFD1-218ENST00000556256 WT1P19544 449 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-218ENST00000556256 GPD1P21695 349 aa4.92□□□□□ -1.62
SCFD1-218ENST00000556256 SLC6A2P23975 617 aa4.92□□□□□ -1.62
SCFD1-218ENST00000556256 FOLR3P41439 243 aa4.92□□□□□ -1.62
SCFD1-218ENST00000556256 UBXN2BQ14CS0 331 aa4.92□□□□□ -1.62
SCFD1-218ENST00000556256 MST1LQ2TV78 715 aa4.92□□□□□ -1.62
SCFD1-218ENST00000556256 FOXR2Q6PJQ5 311 aa4.92□□□□□ -1.62
SCFD1-218ENST00000556256 GRASPQ7Z6J2 395 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-218ENST00000556256 DRC7Q8IY82 874 aa4.92□□□□□ -1.62
SCFD1-218ENST00000556256 HASPINQ8TF76 798 aa4.92□□□□□ -1.62
SCFD1-218ENST00000556256 GPR101Q96P66 508 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms