RNA–Protein interactions for RNA: ENST00000555830.1

SDR39U1-215, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 418 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-215ENST00000555830 SMAD4Q13485 552 aaKnown RBP17.14■□□□□ 0.33
SDR39U1-215ENST00000555830 COL19A1Q14993 1142 aa17.14■□□□□ 0.33
SDR39U1-215ENST00000555830 SEZ6Q53EL9 994 aa17.14■□□□□ 0.33
SDR39U1-215ENST00000555830 HERC4Q5GLZ8 1057 aaPredicted RBP17.14■□□□□ 0.33
SDR39U1-215ENST00000555830 FUT10Q6P4F1 479 aa17.14■□□□□ 0.33
SDR39U1-215ENST00000555830 GSTCDQ8NEC7 633 aa17.14■□□□□ 0.33
SDR39U1-215ENST00000555830 CASP10Q92851 521 aa17.14■□□□□ 0.33
SDR39U1-215ENST00000555830 MSTO1Q9BUK6 570 aa17.14■□□□□ 0.33
SDR39U1-215ENST00000555830 APOL5Q9BWW9 433 aa17.14■□□□□ 0.33
SDR39U1-215ENST00000555830 CUEDC2Q9H467 287 aa17.14■□□□□ 0.33
SDR39U1-215ENST00000555830 SLC38A7Q9NVC3 462 aa17.14■□□□□ 0.33
SDR39U1-215ENST00000555830 PANK4Q9NVE7 773 aa17.14■□□□□ 0.33
SDR39U1-215ENST00000555830 PCDHA7Q9UN72 937 aa17.14■□□□□ 0.33
SDR39U1-215ENST00000555830 PDCD11Q14690 1871 aaKnown RBP17.14■□□□□ 0.33
SDR39U1-215ENST00000555830 TCHHQ07283 1943 aa17.13■□□□□ 0.33
SDR39U1-215ENST00000555830 GRXCR2A6NFK2 248 aa17.13■□□□□ 0.33
SDR39U1-215ENST00000555830 F8W810 466 aa17.13■□□□□ 0.33
SDR39U1-215ENST00000555830 TNFRSF10AO00220 468 aa17.13■□□□□ 0.33
SDR39U1-215ENST00000555830 GLP2RO95838 553 aa17.13■□□□□ 0.33
SDR39U1-215ENST00000555830 PROZP22891 400 aa17.13■□□□□ 0.33
SDR39U1-215ENST00000555830 PPP2R3AQ06190 1150 aa17.13■□□□□ 0.33
SDR39U1-215ENST00000555830 PTPN14Q15678 1187 aa17.13■□□□□ 0.33
SDR39U1-215ENST00000555830 ZC2HC1CQ53FD0 456 aaPredicted RBP17.13■□□□□ 0.33
SDR39U1-215ENST00000555830 SHC4Q6S5L8 630 aa17.13■□□□□ 0.33
SDR39U1-215ENST00000555830 PPFIBP1Q86W92 1011 aa17.13■□□□□ 0.33
SDR39U1-215ENST00000555830 CEP57Q86XR8 500 aa17.13■□□□□ 0.33
SDR39U1-215ENST00000555830 CEP57L1Q8IYX8 460 aa17.13■□□□□ 0.33
SDR39U1-215ENST00000555830 SYCP3Q8IZU3 236 aa17.13■□□□□ 0.33
SDR39U1-215ENST00000555830 FAM212AQ96EL1 285 aa17.13■□□□□ 0.33
SDR39U1-215ENST00000555830 SNX27Q96L92 541 aa17.13■□□□□ 0.33
SDR39U1-215ENST00000555830 PYM1Q9BRP8 204 aaKnown RBP17.13■□□□□ 0.33
SDR39U1-215ENST00000555830 VN1R3Q9BXE9 311 aa17.13■□□□□ 0.33
SDR39U1-215ENST00000555830 TNMDQ9H2S6 317 aa17.13■□□□□ 0.33
SDR39U1-215ENST00000555830 PTPRHQ9HD43 1115 aa17.13■□□□□ 0.33
SDR39U1-215ENST00000555830 EXOC7Q9UPT5 735 aa17.13■□□□□ 0.33
SDR39U1-215ENST00000555830 POLR2DO15514 142 aaKnown RBP17.12■□□□□ 0.33
SDR39U1-215ENST00000555830 MBTPS2O43462 519 aa17.12■□□□□ 0.33
SDR39U1-215ENST00000555830 CLASP2O75122 1294 aaKnown RBP17.12■□□□□ 0.33
SDR39U1-215ENST00000555830 KIF4AO95239 1232 aa17.12■□□□□ 0.33
SDR39U1-215ENST00000555830 ADH1AP07327 375 aa17.12■□□□□ 0.33
SDR39U1-215ENST00000555830 CLTAP09496 248 aa17.12■□□□□ 0.33
SDR39U1-215ENST00000555830 MCL1Q07820 350 aa17.12■□□□□ 0.33
SDR39U1-215ENST00000555830 KYAT1Q16773 422 aa17.12■□□□□ 0.33
SDR39U1-215ENST00000555830 USP41Q3LFD5 358 aa17.12■□□□□ 0.33
SDR39U1-215ENST00000555830 ELMSAN1Q6PJG2 1045 aa17.12■□□□□ 0.33
SDR39U1-215ENST00000555830 STXBP4Q6ZWJ1 553 aa17.12■□□□□ 0.33
SDR39U1-215ENST00000555830 MAP4K3Q8IVH8 894 aa17.12■□□□□ 0.33
SDR39U1-215ENST00000555830 NOC3LQ8WTT2 800 aaKnown RBP17.12■□□□□ 0.33
SDR39U1-215ENST00000555830 HVCN1Q96D96 273 aa17.12■□□□□ 0.33
SDR39U1-215ENST00000555830 UROC1Q96N76 676 aa17.12■□□□□ 0.33
SDR39U1-215ENST00000555830 PAAF1Q9BRP4 392 aa17.12■□□□□ 0.33
SDR39U1-215ENST00000555830 CXCL16Q9H2A7 254 aa17.12■□□□□ 0.33
SDR39U1-215ENST00000555830 RPF1Q9H9Y2 349 aaKnown RBP17.12■□□□□ 0.33
SDR39U1-215ENST00000555830 MAGEF1Q9HAY2 307 aa17.12■□□□□ 0.33
SDR39U1-215ENST00000555830 HCFC2Q9Y5Z7 792 aa17.12■□□□□ 0.33
SDR39U1-215ENST00000555830 SMIM28A0A1B0GU29 152 aa17.11■□□□□ 0.33
SDR39U1-215ENST00000555830 OGTO15294 1046 aa17.11■□□□□ 0.33
SDR39U1-215ENST00000555830 B3GAT3O94766 335 aa17.11■□□□□ 0.33
SDR39U1-215ENST00000555830 CXCL8P10145 99 aa17.11■□□□□ 0.33
SDR39U1-215ENST00000555830 GTF2BQ00403 316 aa17.11■□□□□ 0.33
SDR39U1-215ENST00000555830 ELAVL2Q12926 359 aaKnown RBP17.11■□□□□ 0.33
SDR39U1-215ENST00000555830 FAM171A1Q5VUB5 890 aa17.11■□□□□ 0.33
SDR39U1-215ENST00000555830 SLFN12LQ6IEE8 588 aa17.11■□□□□ 0.33
SDR39U1-215ENST00000555830 CES5AQ6NT32 575 aa17.11■□□□□ 0.33
SDR39U1-215ENST00000555830 ANKRD54Q6NXT1 300 aa17.11■□□□□ 0.33
SDR39U1-215ENST00000555830 GLYCTKQ8IVS8 523 aa17.11■□□□□ 0.33
SDR39U1-215ENST00000555830 VN1R2Q8NFZ6 395 aa17.11■□□□□ 0.33
SDR39U1-215ENST00000555830 RIN2Q8WYP3 895 aaPredicted RBP17.11■□□□□ 0.33
SDR39U1-215ENST00000555830 DNAJC19Q96DA6 116 aa17.11■□□□□ 0.33
SDR39U1-215ENST00000555830 B3GALT6Q96L58 329 aa17.11■□□□□ 0.33
SDR39U1-215ENST00000555830 PPP1R10Q96QC0 940 aaKnown RBP17.11■□□□□ 0.33
SDR39U1-215ENST00000555830 ACCSQ96QU6 501 aa17.11■□□□□ 0.33
SDR39U1-215ENST00000555830 GOLGA2P5Q9HBQ8 144 aa17.11■□□□□ 0.33
SDR39U1-215ENST00000555830 DZANK1Q9NVP4 752 aa17.11■□□□□ 0.33
SDR39U1-215ENST00000555830 CLEC1BQ9P126 229 aa17.11■□□□□ 0.33
SDR39U1-215ENST00000555830 PCDHB13Q9Y5F0 798 aa17.11■□□□□ 0.33
SDR39U1-215ENST00000555830 IRAK3Q9Y616 596 aa17.11■□□□□ 0.33
SDR39U1-215ENST00000555830 ABLIM1O14639 778 aa17.1■□□□□ 0.33
SDR39U1-215ENST00000555830 XPOTO43592 962 aaKnown RBP17.1■□□□□ 0.33
SDR39U1-215ENST00000555830 TRAPPC3O43617 180 aa17.1■□□□□ 0.33
SDR39U1-215ENST00000555830 PIGRP01833 764 aa17.1■□□□□ 0.33
SDR39U1-215ENST00000555830 CLCNKBP51801 687 aa17.1■□□□□ 0.33
SDR39U1-215ENST00000555830 CREMQ03060 361 aa17.1■□□□□ 0.33
SDR39U1-215ENST00000555830 COASYQ13057 564 aa17.1■□□□□ 0.33
SDR39U1-215ENST00000555830 ALCAMQ13740 583 aa17.1■□□□□ 0.33
SDR39U1-215ENST00000555830 AXDND1Q5T1B0 1012 aaPredicted RBP17.1■□□□□ 0.33
SDR39U1-215ENST00000555830 RESP18Q5W5W9 173 aa17.1■□□□□ 0.33
SDR39U1-215ENST00000555830 ADALQ6DHV7 355 aa17.1■□□□□ 0.33
SDR39U1-215ENST00000555830 TAS1R1Q7RTX1 841 aa17.1■□□□□ 0.33
SDR39U1-215ENST00000555830 SMRP1Q8NCR6 262 aa17.1■□□□□ 0.33
SDR39U1-215ENST00000555830 LEO1Q8WVC0 666 aaPredicted RBP17.1■□□□□ 0.33
SDR39U1-215ENST00000555830 POMGNT1Q8WZA1 660 aa17.1■□□□□ 0.33
SDR39U1-215ENST00000555830 KIF12Q96FN5 646 aa17.1■□□□□ 0.33
SDR39U1-215ENST00000555830 MSLNLQ96KJ4 702 aa17.1■□□□□ 0.33
SDR39U1-215ENST00000555830 KLHL5Q96PQ7 755 aa17.1■□□□□ 0.33
SDR39U1-215ENST00000555830 POP1Q99575 1024 aaKnown RBP17.1■□□□□ 0.33
SDR39U1-215ENST00000555830 GPR62Q9BZJ7 368 aa17.1■□□□□ 0.33
SDR39U1-215ENST00000555830 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.1■□□□□ 0.33
SDR39U1-215ENST00000555830 CNTN3Q9P232 1028 aa17.1■□□□□ 0.33
SDR39U1-215ENST00000555830 RCOR1Q9UKL0 485 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms