RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 FAM193BQ96PV7 902 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-215ENST00000555616 ADPGKQ9BRR6 497 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 NTPCRQ9BSD7 190 aaKnown RBP10.55□□□□□ -0.72
ACTN1-215ENST00000555616 TMEM134Q9H6X4 195 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 RMND1Q9NWS8 449 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 KIAA1468Q9P260 1216 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 TNFSF13BQ9Y275 285 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 USP20Q9Y2K6 914 aa10.55□□□□□ -0.72
ACTN1-215ENST00000555616 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-215ENST00000555616 SYCE3A1L190 88 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 CCDC169A6NNP5 214 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 K7ERI5 159 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 PTGESO14684 152 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 NRP1O14786 923 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 ALDH2P05091 517 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 ASIC1P78348 528 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 DPYDQ12882 1025 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 BMS1Q14692 1282 aaKnown RBP10.54□□□□□ -0.72
ACTN1-215ENST00000555616 TMEM132AQ24JP5 1023 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 ARSHQ5FYA8 562 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 CNNM4Q6P4Q7 775 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 APBB1IPQ7Z5R6 666 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-215ENST00000555616 ADHFE1Q8IWW8 467 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 TMEM161BQ8NDZ6 487 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 GSDMAQ96QA5 445 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 RPS6KC1Q96S38 1066 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 C7orf25Q9BPX7 421 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 HERC2P3Q9BVR0 1158 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 MRPL4Q9BYD3 311 aaKnown RBP10.54□□□□□ -0.72
ACTN1-215ENST00000555616 GTPBP4Q9BZE4 634 aaKnown RBP10.54□□□□□ -0.72
ACTN1-215ENST00000555616 TRIM9Q9C026 710 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 CDT1Q9H211 546 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 PTPRHQ9HD43 1115 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 CD320Q9NPF0 282 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 KMT5AQ9NQR1 393 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 MIOSQ9NXC5 875 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 PARP2Q9UGN5 583 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 ODF2LQ9ULJ1 636 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 FAN1Q9Y2M0 1017 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 PRG3Q9Y2Y8 225 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-215ENST00000555616 USP15Q9Y4E8 981 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-215ENST00000555616 HCFC2Q9Y5Z7 792 aa10.54□□□□□ -0.72
ACTN1-215ENST00000555616 C19orf67A6NJJ6 358 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 ABLIM1O14639 778 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 SLC16A4O15374 487 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 CLASP2O75122 1294 aaKnown RBP10.53□□□□□ -0.72
ACTN1-215ENST00000555616 TBCAO75347 108 aaKnown RBP10.53□□□□□ -0.72
ACTN1-215ENST00000555616 CXCL14O95715 111 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 SOD2P04179 222 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 PRR29P0C7W0 189 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 CCDC192P0DO97 292 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 MAPTP10636 758 aaKnown RBP10.53□□□□□ -0.72
ACTN1-215ENST00000555616 PROZP22891 400 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 OR1G1P47890 313 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 ZNF131P52739 623 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 NCKAP1LP55160 1127 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 RAD51AP2Q09MP3 1159 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 TUSC3Q13454 348 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 CUL4BQ13620 913 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 NAB2Q15742 525 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 ZNF568Q3ZCX4 644 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 ANKRD54Q6NXT1 300 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 CCDC65Q8IXS2 484 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 GJD3Q8N144 294 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 TRIML1Q8N9V2 468 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 AUTS2Q8WXX7 1259 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 SUSD6Q92537 303 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 DDX12PQ92771 950 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 CASP10Q92851 521 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 POP1Q99575 1024 aaKnown RBP10.53□□□□□ -0.72
ACTN1-215ENST00000555616 ACO2Q99798 780 aaKnown RBP10.53□□□□□ -0.72
ACTN1-215ENST00000555616 REEP2Q9BRK0 252 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 TARS2Q9BW92 718 aaKnown RBP10.53□□□□□ -0.72
ACTN1-215ENST00000555616 BLZF1Q9H2G9 400 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 EXOC1Q9NV70 894 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 SNTG2Q9NY99 539 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 KLK14Q9P0G3 267 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 LARSQ9P2J5 1176 aaKnown RBP10.53□□□□□ -0.72
ACTN1-215ENST00000555616 KCNG1Q9UIX4 513 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 PCDHA5Q9Y5H7 936 aa10.53□□□□□ -0.72
ACTN1-215ENST00000555616 NPHP3-ACAD11A0A0J9YXS1 232 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 PVALEFA0A1B0GWK0 134 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 MYMKA6NI61 221 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 SFI1A8K8P3 1242 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 F8W810 466 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 H0YCG3 227 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 LILRB3O75022 631 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 RPN1P04843 607 aaKnown RBP10.52□□□□□ -0.73
ACTN1-215ENST00000555616 URODP06132 367 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 MCF2P10911 925 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 IDEP14735 1019 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 HOXB8P17481 243 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-215ENST00000555616 COL9A1P20849 921 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 SCP2P22307 547 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 GRM5P41594 1212 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 SMTNP53814 917 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 ZNF445P59923 1031 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 CACNB1Q02641 598 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-215ENST00000555616 KCNB1Q14721 858 aa10.52□□□□□ -0.73
ACTN1-215ENST00000555616 LLGL2Q6P1M3 1020 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms