RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 PPP2CAP67775 309 aa6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 NKX6-1P78426 367 aaPredicted RBP6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 MRPL49Q13405 166 aaKnown RBP6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 RIN1Q13671 783 aa6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 FGL2Q14314 439 aa6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 CNN3Q15417 329 aaKnown RBP6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 IL31Q6EBC2 164 aa6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 ZSCAN18Q8TBC5 510 aaPredicted RBP6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 STON2Q8WXE9 905 aa6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 ARL8AQ96BM9 186 aa6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 NEIL1Q96FI4 390 aaPredicted RBP6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 SLC35A4Q96G79 324 aa6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 TCF25Q9BQ70 676 aa6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 NELFAQ9H3P2 528 aa6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 PNPOQ9NVS9 261 aa6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 ABCF2Q9UG63 623 aa6.79□□□□□ -1.32
CKS1BP1-201ENST00000555221 CFAP69A5D8W1 941 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 MATN2O00339 956 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 PMM2O15305 246 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 C8AP07357 584 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 CR2P20023 1033 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 CREMQ03060 361 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 SNAPC2Q13487 334 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 SEMA5AQ13591 1074 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 SAFB2Q14151 953 aaKnown RBP eCLIP6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 PLS1Q14651 629 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 PLXDC1Q8IUK5 500 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 LRRC56Q8IYG6 542 aaPredicted RBP6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 FBXO18Q8NFZ0 1043 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 PLBD2Q8NHP8 589 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 LRTOMTQ8WZ04 291 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 LMF1Q96S06 567 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 RPS6KC1Q96S38 1066 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 DPYSL5Q9BPU6 564 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 EPC1Q9H2F5 836 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 BHMT2Q9H2M3 363 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 ARMT1Q9H993 441 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 CHST12Q9NRB3 414 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 CNNM1Q9NRU3 951 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 GNL3LQ9NVN8 582 aaKnown RBP6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 ACTL7AQ9Y615 435 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 ATRNL1Q5VV63 1379 aa6.78□□□□□ -1.32
CKS1BP1-201ENST00000555221 ARID4BQ4LE39 1312 aaPredicted RBP6.77□□□□□ -1.32
CKS1BP1-201ENST00000555221 B5MCH6 92 aa6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 FRS3O43559 492 aa6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 CDC14BO60729 498 aa6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 RAP2AP10114 183 aa6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 FPR1P21462 350 aa6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 PEX2P28328 305 aa6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 RPS19P39019 145 aaKnown RBP6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 ALDH1A3P47895 512 aa6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 NEK3P51956 506 aa6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 EPHB4P54760 987 aa6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 ZNF280AP59817 542 aaPredicted RBP6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 POLD3Q15054 466 aaPredicted RBP6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 MFSD14BQ5SR56 506 aa6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 AFMIDQ63HM1 303 aa6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 OTUD7BQ6GQQ9 843 aa6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 SH2D3CQ8N5H7 860 aa6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 PMM1Q92871 262 aa6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 BORCS6Q96GS4 357 aa6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 PSMD1Q99460 953 aa6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 MPHOSPH6Q99547 160 aaKnown RBP6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 C11orf54Q9H0W9 315 aaPredicted RBP6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 NUP62CLQ9H1M0 184 aa6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 SARS2Q9NP81 518 aaKnown RBP6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 SIDT1Q9NXL6 827 aaKnown RBP6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 COMMD10Q9Y6G5 202 aa6.77□□□□□ -1.33
CKS1BP1-201ENST00000555221 PJA2O43164 708 aa6.76□□□□□ -1.33
CKS1BP1-201ENST00000555221 PHGDHO43175 533 aaKnown RBP6.76□□□□□ -1.33
CKS1BP1-201ENST00000555221 PQBP1O60828 265 aaKnown RBP6.76□□□□□ -1.33
CKS1BP1-201ENST00000555221 CD1AP06126 327 aa6.76□□□□□ -1.33
CKS1BP1-201ENST00000555221 SNRPA1P09661 255 aaKnown RBP6.76□□□□□ -1.33
CKS1BP1-201ENST00000555221 MTHFD1P11586 935 aaKnown RBP6.76□□□□□ -1.33
CKS1BP1-201ENST00000555221 ATP5JP18859 108 aa6.76□□□□□ -1.33
CKS1BP1-201ENST00000555221 FLYWCH1Q4VC44 716 aa6.76□□□□□ -1.33
CKS1BP1-201ENST00000555221 DACT2Q5SW24 774 aa6.76□□□□□ -1.33
CKS1BP1-201ENST00000555221 FAM111BQ6SJ93 734 aa6.76□□□□□ -1.33
CKS1BP1-201ENST00000555221 GPR135Q8IZ08 494 aa6.76□□□□□ -1.33
CKS1BP1-201ENST00000555221 KRT78Q8N1N4 520 aa6.76□□□□□ -1.33
CKS1BP1-201ENST00000555221 BRIX1Q8TDN6 353 aaKnown RBP6.76□□□□□ -1.33
CKS1BP1-201ENST00000555221 CEP95Q96GE4 821 aa6.76□□□□□ -1.33
CKS1BP1-201ENST00000555221 LRRC37BQ96QE4 947 aa6.76□□□□□ -1.33
CKS1BP1-201ENST00000555221 TPCN1Q9ULQ1 816 aa6.76□□□□□ -1.33
CKS1BP1-201ENST00000555221 RUVBL1Q9Y265 456 aaKnown RBP6.76□□□□□ -1.33
CKS1BP1-201ENST00000555221 PCDHGB6Q9Y5F9 930 aa6.76□□□□□ -1.33
CKS1BP1-201ENST00000555221 ZMYM3Q14202 1370 aa6.76□□□□□ -1.33
CKS1BP1-201ENST00000555221 A0A1W2PPL8 197 aa6.75□□□□□ -1.33
CKS1BP1-201ENST00000555221 NT5C1B-RDH14C9J2C7 533 aa6.75□□□□□ -1.33
CKS1BP1-201ENST00000555221 HOXA3O43365 443 aaPredicted RBP6.75□□□□□ -1.33
CKS1BP1-201ENST00000555221 LAMTOR5O43504 91 aa6.75□□□□□ -1.33
CKS1BP1-201ENST00000555221 RPL17P18621 184 aaKnown RBP6.75□□□□□ -1.33
CKS1BP1-201ENST00000555221 PABPC1LQ4VXU2 614 aaKnown RBP6.75□□□□□ -1.33
CKS1BP1-201ENST00000555221 SLFN13Q68D06 897 aa6.75□□□□□ -1.33
CKS1BP1-201ENST00000555221 MFSD5Q6N075 450 aa6.75□□□□□ -1.33
CKS1BP1-201ENST00000555221 SWSAP1Q6NVH7 229 aa6.75□□□□□ -1.33
CKS1BP1-201ENST00000555221 SEM1Q6ZVN7 128 aa6.75□□□□□ -1.33
CKS1BP1-201ENST00000555221 SLC39A13Q96H72 371 aa6.75□□□□□ -1.33
CKS1BP1-201ENST00000555221 STRBPQ96SI9 672 aaKnown RBP6.75□□□□□ -1.33
CKS1BP1-201ENST00000555221 LRRC27Q9C0I9 530 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms