RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 YARSP54577 528 aaKnown RBP15.52■□□□□ 0.07
SHMT2-217ENST00000555116 SLC10A6Q3KNW5 377 aa15.52■□□□□ 0.07
SHMT2-217ENST00000555116 ZBTB41Q5SVQ8 909 aa15.52■□□□□ 0.07
SHMT2-217ENST00000555116 IGSF21Q96ID5 467 aa15.52■□□□□ 0.07
SHMT2-217ENST00000555116 LMBRD1Q9NUN5 540 aa15.52■□□□□ 0.07
SHMT2-217ENST00000555116 MARCH5Q9NX47 278 aa15.52■□□□□ 0.07
SHMT2-217ENST00000555116 FAN1Q9Y2M0 1017 aa15.52■□□□□ 0.07
SHMT2-217ENST00000555116 NRP1O14786 923 aa15.51■□□□□ 0.07
SHMT2-217ENST00000555116 EIF3DO15371 548 aaKnown RBP eCLIP15.51■□□□□ 0.07
SHMT2-217ENST00000555116 THP07101 528 aa15.51■□□□□ 0.07
SHMT2-217ENST00000555116 CLTAP09496 248 aa15.51■□□□□ 0.07
SHMT2-217ENST00000555116 ADSSP30520 456 aa15.51■□□□□ 0.07
SHMT2-217ENST00000555116 IRS1P35568 1242 aa15.51■□□□□ 0.07
SHMT2-217ENST00000555116 TNFSF9P41273 254 aa15.51■□□□□ 0.07
SHMT2-217ENST00000555116 ERVFC1P60507 584 aa15.51■□□□□ 0.07
SHMT2-217ENST00000555116 FAM160A1Q05DH4 1040 aa15.51■□□□□ 0.07
SHMT2-217ENST00000555116 TIGD5Q53EQ6 642 aa15.51■□□□□ 0.07
SHMT2-217ENST00000555116 SLFN12LQ6IEE8 588 aa15.51■□□□□ 0.07
SHMT2-217ENST00000555116 ZNF507Q8TCN5 953 aa15.51■□□□□ 0.07
SHMT2-217ENST00000555116 PPM1EQ8WY54 764 aa15.51■□□□□ 0.07
SHMT2-217ENST00000555116 PPP1R10Q96QC0 940 aaKnown RBP15.51■□□□□ 0.07
SHMT2-217ENST00000555116 MSTO1Q9BUK6 570 aa15.51■□□□□ 0.07
SHMT2-217ENST00000555116 TOPORSQ9NS56 1045 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-217ENST00000555116 SMIM28A0A1B0GU29 152 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 FSCN2O14926 492 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 OR1G1P47890 313 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 KRT17Q04695 432 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 DPYDQ12882 1025 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 TUSC3Q13454 348 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 KLHL40Q2TBA0 621 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 KMT5BQ4FZB7 885 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 GLRA4Q5JXX5 417 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 STXBP4Q6ZWJ1 553 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 TMEM169Q96HH4 297 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 ZMAT2Q96NC0 199 aaKnown RBP15.5■□□□□ 0.07
SHMT2-217ENST00000555116 VN1R3Q9BXE9 311 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 NSUN3Q9H649 340 aaKnown RBP15.5■□□□□ 0.07
SHMT2-217ENST00000555116 TMEM206Q9H813 350 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 TLR9Q9NR96 1032 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 CNTN3Q9P232 1028 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 CACNG4Q9UBN1 327 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 PCDHGC5Q9Y5F6 944 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 REV3LO60673 3130 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 FSD2A1L4K1 749 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 F8W810 466 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 CSPG5O95196 566 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 CXCL8P10145 99 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 KCNE1P15382 129 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 ENOX2Q16206 610 aaKnown RBP15.5■□□□□ 0.07
SHMT2-217ENST00000555116 KYAT1Q16773 422 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 DDX53Q86TM3 631 aaKnown RBP15.5■□□□□ 0.07
SHMT2-217ENST00000555116 SYCP3Q8IZU3 236 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 SCFD1Q8WVM8 642 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 PAAF1Q9BRP4 392 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 SLC39A2Q9NP94 309 aa15.5■□□□□ 0.07
SHMT2-217ENST00000555116 PUF60Q9UHX1 559 aaKnown RBP15.5■□□□□ 0.07
SHMT2-217ENST00000555116 CPSF3Q9UKF6 684 aaKnown RBP15.5■□□□□ 0.07
SHMT2-217ENST00000555116 PRG3Q9Y2Y8 225 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-217ENST00000555116 UBE4BO95155 1302 aa15.49■□□□□ 0.07
SHMT2-217ENST00000555116 TTC26A0AVF1 554 aa15.49■□□□□ 0.07
SHMT2-217ENST00000555116 EFEMP2O95967 443 aa15.49■□□□□ 0.07
SHMT2-217ENST00000555116 RPN1P04843 607 aaKnown RBP15.49■□□□□ 0.07
SHMT2-217ENST00000555116 ADRB2P07550 413 aa15.49■□□□□ 0.07
SHMT2-217ENST00000555116 POSTNQ15063 836 aa15.49■□□□□ 0.07
SHMT2-217ENST00000555116 TCEAL5Q5H9L2 206 aa15.49■□□□□ 0.07
SHMT2-217ENST00000555116 KANK3Q6NY19 840 aa15.49■□□□□ 0.07
SHMT2-217ENST00000555116 KIAA0895Q8NCT3 520 aa15.49■□□□□ 0.07
SHMT2-217ENST00000555116 POMGNT1Q8WZA1 660 aa15.49■□□□□ 0.07
SHMT2-217ENST00000555116 PLEKHA5Q9HAU0 1116 aa15.49■□□□□ 0.07
SHMT2-217ENST00000555116 EXOC1Q9NV70 894 aa15.49■□□□□ 0.07
SHMT2-217ENST00000555116 AGO2Q9UKV8 859 aaKnown RBP15.49■□□□□ 0.07
SHMT2-217ENST00000555116 VWA8A3KMH1 1905 aa15.49■□□□□ 0.07
SHMT2-217ENST00000555116 CASTOR2A6NHX0 329 aa15.48■□□□□ 0.07
SHMT2-217ENST00000555116 NR1I2O75469 434 aa15.48■□□□□ 0.07
SHMT2-217ENST00000555116 STK4Q13043 487 aa15.48■□□□□ 0.07
SHMT2-217ENST00000555116 PSMD2Q13200 908 aa15.48■□□□□ 0.07
SHMT2-217ENST00000555116 BMT2Q1RMZ1 405 aa15.48■□□□□ 0.07
SHMT2-217ENST00000555116 PDE12Q6L8Q7 609 aaKnown RBP15.48■□□□□ 0.07
SHMT2-217ENST00000555116 CRELD2Q6UXH1 353 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-217ENST00000555116 ADGRD2Q7Z7M1 963 aa15.48■□□□□ 0.07
SHMT2-217ENST00000555116 RABGGTAQ92696 567 aa15.48■□□□□ 0.07
SHMT2-217ENST00000555116 TIGD1Q96MW7 591 aa15.48■□□□□ 0.07
SHMT2-217ENST00000555116 COLEC11Q9BWP8 271 aa15.48■□□□□ 0.07
SHMT2-217ENST00000555116 EYSQ5T1H1 3165 aa15.48■□□□□ 0.07
SHMT2-217ENST00000555116 GOLGA6L3A6NEY3 463 aa15.48■□□□□ 0.07
SHMT2-217ENST00000555116 PRPF40AO75400 957 aaKnown RBP15.48■□□□□ 0.07
SHMT2-217ENST00000555116 GARTP22102 1010 aa15.48■□□□□ 0.07
SHMT2-217ENST00000555116 ACOT2P49753 483 aa15.48■□□□□ 0.07
SHMT2-217ENST00000555116 SOX4Q06945 474 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-217ENST00000555116 RNF168Q8IYW5 571 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-217ENST00000555116 VPS52Q8N1B4 723 aa15.48■□□□□ 0.07
SHMT2-217ENST00000555116 ZSWIM2Q8NEG5 633 aa15.48■□□□□ 0.07
SHMT2-217ENST00000555116 CBWD1Q9BRT8 395 aa15.48■□□□□ 0.07
SHMT2-217ENST00000555116 ZBP1Q9H171 429 aa15.48■□□□□ 0.07
SHMT2-217ENST00000555116 RPF1Q9H9Y2 349 aaKnown RBP15.48■□□□□ 0.07
SHMT2-217ENST00000555116 PRDM6Q9NQX0 595 aa15.48■□□□□ 0.07
SHMT2-217ENST00000555116 LACTBL1A8MY62 500 aa15.47■□□□□ 0.07
SHMT2-217ENST00000555116 TGFB1I1O43294 461 aa15.47■□□□□ 0.07
SHMT2-217ENST00000555116 RHOBTB3O94955 611 aa15.47■□□□□ 0.07
SHMT2-217ENST00000555116 PNOCQ13519 176 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms