RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 NOD2Q9HC29 1040 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 CHST7Q9NS84 486 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 GTF3C4Q9UKN8 822 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 NHSQ6T4R5 1651 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 ENTPD3O75355 529 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 DNAJC8O75937 253 aaPredicted RBP10.16□□□□□ -0.78
SYNE2-213ENST00000554805 CHKAP35790 457 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 RARRES1P49788 294 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 ITGA8P53708 1063 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 CLNS1AP54105 237 aaKnown RBP10.16□□□□□ -0.78
SYNE2-213ENST00000554805 ALCAMQ13740 583 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 PREPLQ4J6C6 727 aaPredicted RBP10.16□□□□□ -0.78
SYNE2-213ENST00000554805 LMBRD2Q68DH5 695 aaPredicted RBP10.16□□□□□ -0.78
SYNE2-213ENST00000554805 CAPN12Q6ZSI9 719 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 TRMT10CQ7L0Y3 403 aaKnown RBP10.16□□□□□ -0.78
SYNE2-213ENST00000554805 CYFIP1Q7L576 1253 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 RPAINQ86UA6 219 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 SRRM1Q8IYB3 904 aaKnown RBP10.16□□□□□ -0.78
SYNE2-213ENST00000554805 FAM71AQ8IYT1 594 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 KIF2BQ8N4N8 673 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 TAS1R2Q8TE23 839 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 CPA5Q8WXQ8 436 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 ART4Q93070 314 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 KLHL29Q96CT2 875 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 IWS1Q96ST2 819 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 RIT2Q99578 217 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 SERPINA10Q9UK55 444 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.16□□□□□ -0.78
SYNE2-213ENST00000554805 CDK5RAP2Q96SN8 1893 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 H0YIN7 160 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 SORBS3O60504 671 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 SCP2P22307 547 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 YWHABP31946 246 aaKnown RBP10.16□□□□□ -0.78
SYNE2-213ENST00000554805 XRCC4Q13426 336 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 MYBPC2Q14324 1141 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 ITIH4Q14624 930 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 SEPT14Q6ZU15 432 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 IL31RAQ8NI17 732 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 C9orf72Q96LT7 481 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 TRIM7Q9C029 511 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 ECT2Q9H8V3 914 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 UVRAGQ9P2Y5 699 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 TMX2Q9Y320 296 aa10.16□□□□□ -0.78
SYNE2-213ENST00000554805 USP15Q9Y4E8 981 aaPredicted RBP10.16□□□□□ -0.78
SYNE2-213ENST00000554805 DENND3A2RUS2 1198 aa10.15□□□□□ -0.78
SYNE2-213ENST00000554805 KLRG2A4D1S0 409 aaPredicted RBP10.15□□□□□ -0.78
SYNE2-213ENST00000554805 PPIP5K2O43314 1243 aa10.15□□□□□ -0.78
SYNE2-213ENST00000554805 ONECUT3O60422 494 aaPredicted RBP10.15□□□□□ -0.78
SYNE2-213ENST00000554805 CDR2Q01850 454 aa10.15□□□□□ -0.78
SYNE2-213ENST00000554805 NAA25Q14CX7 972 aa10.15□□□□□ -0.78
SYNE2-213ENST00000554805 DAB2IPQ5VWQ8 1189 aa10.15□□□□□ -0.78
SYNE2-213ENST00000554805 FAM47EQ6ZV65 393 aa10.15□□□□□ -0.78
SYNE2-213ENST00000554805 SNF8Q96H20 258 aa10.15□□□□□ -0.78
SYNE2-213ENST00000554805 ROPN1BQ9BZX4 212 aaPredicted RBP10.15□□□□□ -0.78
SYNE2-213ENST00000554805 ROPN1Q9HAT0 212 aaPredicted RBP10.15□□□□□ -0.78
SYNE2-213ENST00000554805 KMT5AQ9NQR1 393 aa10.15□□□□□ -0.78
SYNE2-213ENST00000554805 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.15□□□□□ -0.78
SYNE2-213ENST00000554805 NOCTQ9UK39 431 aaKnown RBP10.15□□□□□ -0.78
SYNE2-213ENST00000554805 BTAF1O14981 1849 aa10.15□□□□□ -0.78
SYNE2-213ENST00000554805 TESPA1A2RU30 521 aaPredicted RBP10.15□□□□□ -0.78
SYNE2-213ENST00000554805 MUTP22033 750 aa10.15□□□□□ -0.78
SYNE2-213ENST00000554805 HADHBP55084 474 aaKnown RBP10.15□□□□□ -0.78
SYNE2-213ENST00000554805 DLGAP5Q15398 846 aa10.15□□□□□ -0.78
SYNE2-213ENST00000554805 HP1BP3Q5SSJ5 553 aaPredicted RBP10.15□□□□□ -0.78
SYNE2-213ENST00000554805 KAZNQ674X7 775 aa10.15□□□□□ -0.78
SYNE2-213ENST00000554805 ACAD10Q6JQN1 1059 aa10.15□□□□□ -0.78
SYNE2-213ENST00000554805 LLGL2Q6P1M3 1020 aa10.15□□□□□ -0.78
SYNE2-213ENST00000554805 PIGWQ7Z7B1 504 aa10.15□□□□□ -0.78
SYNE2-213ENST00000554805 PASD1Q8IV76 773 aa10.15□□□□□ -0.78
SYNE2-213ENST00000554805 FBXL13Q8NEE6 735 aa10.15□□□□□ -0.78
SYNE2-213ENST00000554805 NFIBO00712 420 aa10.15□□□□□ -0.79
SYNE2-213ENST00000554805 ECM2O94769 699 aaPredicted RBP10.15□□□□□ -0.79
SYNE2-213ENST00000554805 ATP6V1G2O95670 118 aa10.15□□□□□ -0.79
SYNE2-213ENST00000554805 CYP1A2P05177 515 aa10.15□□□□□ -0.79
SYNE2-213ENST00000554805 ELF1P32519 619 aa10.15□□□□□ -0.79
SYNE2-213ENST00000554805 SOX10P56693 466 aa10.15□□□□□ -0.79
SYNE2-213ENST00000554805 DMP1Q13316 513 aaPredicted RBP10.15□□□□□ -0.79
SYNE2-213ENST00000554805 MTMR1Q13613 665 aa10.15□□□□□ -0.79
SYNE2-213ENST00000554805 TMED2Q15363 201 aa10.15□□□□□ -0.79
SYNE2-213ENST00000554805 C1orf220Q5T0J3 134 aa10.15□□□□□ -0.79
SYNE2-213ENST00000554805 USP37Q86T82 979 aa10.15□□□□□ -0.79
SYNE2-213ENST00000554805 FAM160B2Q86V87 743 aa10.15□□□□□ -0.79
SYNE2-213ENST00000554805 GRK7Q8WTQ7 553 aa10.15□□□□□ -0.79
SYNE2-213ENST00000554805 GLIS2Q9BZE0 524 aaPredicted RBP10.15□□□□□ -0.79
SYNE2-213ENST00000554805 C1orf112Q9NSG2 853 aa10.15□□□□□ -0.79
SYNE2-213ENST00000554805 RAB20Q9NX57 234 aa10.15□□□□□ -0.79
SYNE2-213ENST00000554805 SNX3O60493 162 aa10.14□□□□□ -0.79
SYNE2-213ENST00000554805 RAD17O75943 681 aa10.14□□□□□ -0.79
SYNE2-213ENST00000554805 TNNI1P19237 187 aa10.14□□□□□ -0.79
SYNE2-213ENST00000554805 ITIH2P19823 946 aa10.14□□□□□ -0.79
SYNE2-213ENST00000554805 NSFP46459 744 aaKnown RBP10.14□□□□□ -0.79
SYNE2-213ENST00000554805 MYO1EQ12965 1108 aa10.14□□□□□ -0.79
SYNE2-213ENST00000554805 MAIP1Q8WWC4 291 aa10.14□□□□□ -0.79
SYNE2-213ENST00000554805 SHC3Q92529 594 aa10.14□□□□□ -0.79
SYNE2-213ENST00000554805 TGS1Q96RS0 853 aaKnown RBP10.14□□□□□ -0.79
SYNE2-213ENST00000554805 C11orf70Q9BRQ4 267 aa10.14□□□□□ -0.79
SYNE2-213ENST00000554805 TACO1Q9BSH4 297 aaKnown RBP10.14□□□□□ -0.79
SYNE2-213ENST00000554805 A1CFQ9NQ94 594 aaKnown RBP10.14□□□□□ -0.79
SYNE2-213ENST00000554805 RGS17Q9UGC6 210 aaPredicted RBP10.14□□□□□ -0.79
SYNE2-213ENST00000554805 HERC5Q9UII4 1024 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms