RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 ZBTB43O43298 467 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 IGSF3O75054 1194 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 RPS6KA5O75582 802 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 TP53P04637 393 aaPredicted RBP6.57□□□□□ -1.36
VPS33B-203ENST00000554264 ZNF18P17022 549 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 IFNAR1P17181 557 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 DNAJA1P31689 397 aaKnown RBP6.57□□□□□ -1.36
VPS33B-203ENST00000554264 MAGEA10P43363 369 aaPredicted RBP6.57□□□□□ -1.36
VPS33B-203ENST00000554264 PLCD1P51178 756 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 CHMP4BP1P59074 171 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 GNG11P61952 73 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 SSRP1Q08945 709 aaKnown RBP6.57□□□□□ -1.36
VPS33B-203ENST00000554264 AUHQ13825 339 aaKnown RBP6.57□□□□□ -1.36
VPS33B-203ENST00000554264 SMC1AQ14683 1233 aaKnown RBP6.57□□□□□ -1.36
VPS33B-203ENST00000554264 POSTNQ15063 836 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 PUM3Q15397 648 aaKnown RBP6.57□□□□□ -1.36
VPS33B-203ENST00000554264 HSP90B2PQ58FF3 399 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 KRT40Q6A162 431 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 FAM109BQ6ICB4 259 aaPredicted RBP6.57□□□□□ -1.36
VPS33B-203ENST00000554264 SLC23A3Q6PIS1 610 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 CCDC129Q6ZRS4 1044 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 CREG2Q8IUH2 290 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 TMTC1Q8IUR5 882 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 NOSTRINQ8IVI9 506 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 ANKRD13CQ8N6S4 541 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 VGLL2Q8N8G2 317 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 C19orf47Q8N9M1 422 aaKnown RBP6.57□□□□□ -1.36
VPS33B-203ENST00000554264 MSANTD4Q8NCY6 345 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 LRRN4CLQ8ND94 238 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 OR6P1Q8NGX9 317 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 FERMT2Q96AC1 680 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 DHRS1Q96LJ7 313 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 GSDMAQ96QA5 445 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 SEC62Q99442 399 aaKnown RBP6.57□□□□□ -1.36
VPS33B-203ENST00000554264 MAP3K14Q99558 947 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 MKRN2Q9H000 416 aaKnown RBP6.57□□□□□ -1.36
VPS33B-203ENST00000554264 TRIT1Q9H3H1 467 aaKnown RBP6.57□□□□□ -1.36
VPS33B-203ENST00000554264 RNF41Q9H4P4 317 aaPredicted RBP6.57□□□□□ -1.36
VPS33B-203ENST00000554264 C11orf49Q9H6J7 331 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 C19orf73Q9NVV2 129 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 RAI14Q9P0K7 980 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 RAB21Q9UL25 225 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 STRIP2Q9ULQ0 834 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 AGTPBP1Q9UPW5 1226 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 AFG3L2Q9Y4W6 797 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 MYH2Q9UKX2 1941 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 ERICH2A1L162 156 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 VWA3AA6NCI4 1184 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 TRIM75PA6NK02 468 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 M0R2C6 588 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 MAP2K7O14733 419 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 CTNND1O60716 968 aaKnown RBP6.56□□□□□ -1.36
VPS33B-203ENST00000554264 ENTPD3O75355 529 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 CLSTN1O94985 981 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 DEXIO95424 95 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 PRAMEF1O95521 474 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 FGAP02671 866 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 MYL1P05976 194 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 SLC5A1P13866 664 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 SYN1P17600 705 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 FGFR2P21802 821 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 PPP1R2P41236 205 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 GCLCP48506 637 aaPredicted RBP6.56□□□□□ -1.36
VPS33B-203ENST00000554264 SARSP49591 514 aaKnown RBP6.56□□□□□ -1.36
VPS33B-203ENST00000554264 ARID5AQ03989 594 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 PABPC4Q13310 644 aaKnown RBP eCLIP6.56□□□□□ -1.36
VPS33B-203ENST00000554264 MORC3Q14149 939 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 PPP2R5EQ16537 467 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 LRRC24Q50LG9 513 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 SPATA1Q5VX52 437 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 APOA5Q6Q788 366 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 ZNF662Q6ZS27 426 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 TMPRSS7Q7RTY8 843 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 TMEM139Q8IV31 216 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 SPATA20Q8TB22 786 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 KLHDC4Q8TBB5 520 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 FAM71BQ8TC56 605 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 KLHL6Q8WZ60 621 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 EDC3Q96F86 508 aaKnown RBP6.56□□□□□ -1.36
VPS33B-203ENST00000554264 CARD6Q9BX69 1037 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 IDI2Q9BXS1 227 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 LRRC2Q9BYS8 371 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 NACAP1Q9BZK3 213 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 HSD3B7Q9H2F3 369 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 NCOA5Q9HCD5 579 aaKnown RBP6.56□□□□□ -1.36
VPS33B-203ENST00000554264 USP40Q9NVE5 1235 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 ZNHIT6Q9NWK9 470 aaKnown RBP6.56□□□□□ -1.36
VPS33B-203ENST00000554264 RMND1Q9NWS8 449 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 DUSP13Q9UII6 198 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 CDC23Q9UJX2 597 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 PCDHA11Q9Y5I1 949 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 SLC12A7Q9Y666 1083 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 ATRNL1Q5VV63 1379 aa6.56□□□□□ -1.36
VPS33B-203ENST00000554264 COL6A3P12111 3177 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 MROH7-TTC4A0A0A0MT08 1334 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 DNAJC25-GNG10A0A024R161 153 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 TARSL2A2RTX5 802 aaKnown RBP6.55□□□□□ -1.36
VPS33B-203ENST00000554264 CTAGE9A4FU28 777 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 GOLGA8AA7E2F4 631 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 SMAD7O15105 426 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms