RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 CHAMP1Q96JM3 812 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 TMEM209Q96SK2 561 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 STK31Q9BXU1 1019 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 ZNF341Q9BYN7 854 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 DEF6Q9H4E7 631 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 MYH16Q9H6N6 1097 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 DNAJC18Q9H819 358 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 ZCCHC17Q9NP64 241 aaKnown RBP3.95□□□□□ -1.78
SLIRP-202ENST00000553981 JADE2Q9NQC1 790 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 FLRT1Q9NZU1 646 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 RBPJLQ9UBG7 517 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 FTSJ1Q9UET6 329 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 ZHX2Q9Y6X8 837 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 LAMA3Q16787 3333 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 COL6A3P12111 3177 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 LTBP2Q14767 1821 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 ATAD5Q96QE3 1844 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 GAKO14976 1311 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 IL16Q14005 1332 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 CDK5RAP2Q96SN8 1893 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 CNMDO75829 334 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 ALDH1L1O75891 902 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 CPP00450 1065 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 COL6A1P12109 1028 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 CCND3P30281 292 aaPredicted RBP3.94□□□□□ -1.78
SLIRP-202ENST00000553981 LTBRP36941 435 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 RGS3P49796 1198 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 SELENOPP49908 381 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 PRMT2P55345 433 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 TIMM10P62072 90 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 TNFAIP1Q13829 316 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 SV2CQ496J9 727 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 METTL24Q5JXM2 366 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 MAP3K21Q5TCX8 1036 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 FKBP1CQ5VVH2 108 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 SLFN13Q68D06 897 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 TRMT10BQ6PF06 316 aaKnown RBP3.94□□□□□ -1.78
SLIRP-202ENST00000553981 SLC4A10Q6U841 1118 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 C6orf15Q6UXA7 325 aaPredicted RBP3.94□□□□□ -1.78
SLIRP-202ENST00000553981 GADL1Q6ZQY3 521 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 PROSER1Q86XN7 944 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 SCYL3Q8IZE3 742 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 TRPV1Q8NER1 839 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 USP6NLQ92738 828 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 MENTQ9BUN1 341 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.94□□□□□ -1.78
SLIRP-202ENST00000553981 MEGF9Q9H1U4 602 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 EPB41L1Q9H4G0 881 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 BARX1Q9HBU1 254 aaPredicted RBP3.94□□□□□ -1.78
SLIRP-202ENST00000553981 CLDND1Q9NY35 253 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 LRP2BPQ9P2M1 347 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 MYOTQ9UBF9 498 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 OGDHLQ9ULD0 1010 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 ZDHHC9Q9Y397 364 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 MAST2Q6P0Q8 1798 aa3.94□□□□□ -1.78
SLIRP-202ENST00000553981 TRIM75PA6NK02 468 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 B2RBV5 119 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 SMIM22K7EJ46 135 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 EYA2O00167 538 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 CXCL11O14625 94 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 MUSKO15146 869 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 SUSD5O60279 629 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 ZNF623O75123 536 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 DGKIO75912 1065 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 TFRCP02786 760 aaKnown RBP3.93□□□□□ -1.78
SLIRP-202ENST00000553981 CYP2B6P20813 491 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 ITGB8P26012 769 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 KCNJ6P48051 423 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 GFRA1P56159 465 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 LRIT3Q3SXY7 679 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 TAF7LQ5H9L4 462 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 SPDYAQ5MJ70 313 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 C9orf50Q5SZB4 431 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 ADGRA1Q86SQ6 560 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 DEFB123Q8N688 67 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 USP38Q8NB14 1042 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 TMEM145Q8NBT3 493 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 NUDT10Q8NFP7 164 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 PHOSPHO1Q8TCT1 267 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 SSH1Q8WYL5 1049 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 NUDT11Q96G61 164 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 C1orf159Q96HA4 380 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 CCDC140Q96MF4 163 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 P2RX7Q99572 595 aaKnown RBP3.93□□□□□ -1.78
SLIRP-202ENST00000553981 IDI2Q9BXS1 227 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 PCED1AQ9H1Q7 454 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 PORCNQ9H237 461 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 TTYH1Q9H313 450 aaPredicted RBP3.93□□□□□ -1.78
SLIRP-202ENST00000553981 ACBD3Q9H3P7 528 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 SMOC1Q9H4F8 434 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 C9orf78Q9NZ63 289 aaPredicted RBP3.93□□□□□ -1.78
SLIRP-202ENST00000553981 HSPBP1Q9NZL4 362 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 ASH2LQ9UBL3 628 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 ADAM29Q9UKF5 820 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 STXBP5LQ9Y2K9 1186 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 TCAF1Q9Y4C2 921 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 MROH5Q6ZUA9 1318 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 SALL1Q9NSC2 1324 aa3.93□□□□□ -1.78
SLIRP-202ENST00000553981 RANBP2P49792 3224 aaKnown RBP3.93□□□□□ -1.78
SLIRP-202ENST00000553981 RLFQ13129 1914 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms