RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 MRFAP1L1Q96HT8 127 aa15.73■□□□□ 0.11
SHMT2-210ENST00000553950 SCLYQ96I15 445 aa15.73■□□□□ 0.11
SHMT2-210ENST00000553950 SNX27Q96L92 541 aa15.73■□□□□ 0.11
SHMT2-210ENST00000553950 RPS6KC1Q96S38 1066 aa15.73■□□□□ 0.11
SHMT2-210ENST00000553950 TMX1Q9H3N1 280 aa15.73■□□□□ 0.11
SHMT2-210ENST00000553950 NDST4Q9H3R1 872 aa15.73■□□□□ 0.11
SHMT2-210ENST00000553950 ELAC1Q9H777 363 aaKnown RBP15.73■□□□□ 0.11
SHMT2-210ENST00000553950 GIT1Q9Y2X7 761 aa15.73■□□□□ 0.11
SHMT2-210ENST00000553950 C2CD2Q9Y426 696 aa15.73■□□□□ 0.11
SHMT2-210ENST00000553950 TTC3P53804 2025 aa15.73■□□□□ 0.11
SHMT2-210ENST00000553950 GOLGA6L6A8MZA4 724 aa15.72■□□□□ 0.11
SHMT2-210ENST00000553950 PMM2O15305 246 aa15.72■□□□□ 0.11
SHMT2-210ENST00000553950 RECQL4O94761 1208 aa15.72■□□□□ 0.11
SHMT2-210ENST00000553950 TNNC2P02585 160 aa15.72■□□□□ 0.11
SHMT2-210ENST00000553950 TMEM191BP0C7N4 346 aa15.72■□□□□ 0.11
SHMT2-210ENST00000553950 CXCL8P10145 99 aa15.72■□□□□ 0.11
SHMT2-210ENST00000553950 DLATP10515 647 aaKnown RBP15.72■□□□□ 0.11
SHMT2-210ENST00000553950 TNNI1P19237 187 aa15.72■□□□□ 0.11
SHMT2-210ENST00000553950 TNFSF9P41273 254 aa15.72■□□□□ 0.11
SHMT2-210ENST00000553950 CLDN10P78369 228 aa15.72■□□□□ 0.11
SHMT2-210ENST00000553950 MYL7Q01449 175 aa15.72■□□□□ 0.11
SHMT2-210ENST00000553950 KCNH2Q12809 1159 aa15.72■□□□□ 0.11
SHMT2-210ENST00000553950 IKBKEQ14164 716 aa15.72■□□□□ 0.11
SHMT2-210ENST00000553950 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-210ENST00000553950 MRPL10Q7Z7H8 261 aaKnown RBP15.72■□□□□ 0.11
SHMT2-210ENST00000553950 C7orf61Q8IZ16 206 aa15.72■□□□□ 0.11
SHMT2-210ENST00000553950 CEP120Q8N960 986 aa15.72■□□□□ 0.11
SHMT2-210ENST00000553950 DBF4BQ8NFT6 615 aa15.72■□□□□ 0.11
SHMT2-210ENST00000553950 CACTINQ8WUQ7 758 aaKnown RBP15.72■□□□□ 0.11
SHMT2-210ENST00000553950 CCDC127Q96BQ5 260 aa15.72■□□□□ 0.11
SHMT2-210ENST00000553950 ANKRD36BP1Q96IX9 119 aa15.72■□□□□ 0.11
SHMT2-210ENST00000553950 TMEM8AQ9HCN3 771 aa15.72■□□□□ 0.11
SHMT2-210ENST00000553950 IFNKQ9P0W0 207 aa15.72■□□□□ 0.11
SHMT2-210ENST00000553950 CNTN3Q9P232 1028 aa15.72■□□□□ 0.11
SHMT2-210ENST00000553950 DAAM1Q9Y4D1 1078 aa15.72■□□□□ 0.11
SHMT2-210ENST00000553950 DNAH12Q6ZR08 3092 aa15.71■□□□□ 0.11
SHMT2-210ENST00000553950 ABHD14A-ACY1A0A1B0GW23 586 aa15.71■□□□□ 0.11
SHMT2-210ENST00000553950 A0A1W2PQC6 194 aa15.71■□□□□ 0.11
SHMT2-210ENST00000553950 TTC26A0AVF1 554 aa15.71■□□□□ 0.11
SHMT2-210ENST00000553950 TRIM43BA6NCK2 446 aa15.71■□□□□ 0.11
SHMT2-210ENST00000553950 C9IYK1 514 aa15.71■□□□□ 0.11
SHMT2-210ENST00000553950 CDC25BP30305 580 aa15.71■□□□□ 0.11
SHMT2-210ENST00000553950 OSTNP61366 133 aa15.71■□□□□ 0.11
SHMT2-210ENST00000553950 FPGSQ05932 587 aa15.71■□□□□ 0.11
SHMT2-210ENST00000553950 MIIPQ5JXC2 388 aa15.71■□□□□ 0.11
SHMT2-210ENST00000553950 ZBTB41Q5SVQ8 909 aa15.71■□□□□ 0.11
SHMT2-210ENST00000553950 KRT39Q6A163 491 aa15.71■□□□□ 0.11
SHMT2-210ENST00000553950 PSRC1Q6PGN9 363 aaPredicted RBP15.71■□□□□ 0.11
SHMT2-210ENST00000553950 APTXQ7Z2E3 356 aaKnown RBP15.71■□□□□ 0.11
SHMT2-210ENST00000553950 ECHDC2Q86YB7 292 aa15.71■□□□□ 0.11
SHMT2-210ENST00000553950 TRIM43Q96BQ3 446 aaPredicted RBP15.71■□□□□ 0.11
SHMT2-210ENST00000553950 VPS16Q9H269 839 aa15.71■□□□□ 0.11
SHMT2-210ENST00000553950 RTN4Q9NQC3 1192 aaKnown RBP15.71■□□□□ 0.11
SHMT2-210ENST00000553950 SLC38A7Q9NVC3 462 aa15.71■□□□□ 0.11
SHMT2-210ENST00000553950 TMEM161AQ9NX61 479 aa15.71■□□□□ 0.11
SHMT2-210ENST00000553950 SNTG2Q9NY99 539 aa15.71■□□□□ 0.11
SHMT2-210ENST00000553950 NR2E3Q9Y5X4 410 aa15.71■□□□□ 0.11
SHMT2-210ENST00000553950 LRRIQ3A6PVS8 624 aaPredicted RBP15.7■□□□□ 0.1
SHMT2-210ENST00000553950 MGEA5O60502 916 aa15.7■□□□□ 0.1
SHMT2-210ENST00000553950 TRIM49P0CI25 452 aa15.7■□□□□ 0.1
SHMT2-210ENST00000553950 TRIM49CP0CI26 452 aa15.7■□□□□ 0.1
SHMT2-210ENST00000553950 FMO5P49326 533 aa15.7■□□□□ 0.1
SHMT2-210ENST00000553950 UBXN1Q04323 297 aa15.7■□□□□ 0.1
SHMT2-210ENST00000553950 TRIM14Q14142 442 aa15.7■□□□□ 0.1
SHMT2-210ENST00000553950 TMEM132DQ14C87 1099 aa15.7■□□□□ 0.1
SHMT2-210ENST00000553950 DUOXA2Q1HG44 320 aa15.7■□□□□ 0.1
SHMT2-210ENST00000553950 GLB1LQ6UWU2 654 aa15.7■□□□□ 0.1
SHMT2-210ENST00000553950 DEFB128Q7Z7B8 93 aa15.7■□□□□ 0.1
SHMT2-210ENST00000553950 NPAS4Q8IUM7 802 aa15.7■□□□□ 0.1
SHMT2-210ENST00000553950 CCDC150Q8NCX0 1101 aa15.7■□□□□ 0.1
SHMT2-210ENST00000553950 SMG8Q8ND04 991 aaKnown RBP15.7■□□□□ 0.1
SHMT2-210ENST00000553950 FAM212AQ96EL1 285 aa15.7■□□□□ 0.1
SHMT2-210ENST00000553950 APOL6Q9BWW8 343 aa15.7■□□□□ 0.1
SHMT2-210ENST00000553950 IMPG2Q9BZV3 1241 aa15.7■□□□□ 0.1
SHMT2-210ENST00000553950 XPO4Q9C0E2 1151 aaKnown RBP15.7■□□□□ 0.1
SHMT2-210ENST00000553950 MTIF3Q9H2K0 278 aaKnown RBP15.7■□□□□ 0.1
SHMT2-210ENST00000553950 RSAD1Q9HA92 442 aa15.7■□□□□ 0.1
SHMT2-210ENST00000553950 PDE11AQ9HCR9 933 aa15.7■□□□□ 0.1
SHMT2-210ENST00000553950 IL23AQ9NPF7 189 aa15.7■□□□□ 0.1
SHMT2-210ENST00000553950 PARP2Q9UGN5 583 aa15.7■□□□□ 0.1
SHMT2-210ENST00000553950 LRFN2Q9ULH4 789 aa15.7■□□□□ 0.1
SHMT2-210ENST00000553950 R3HCC1Q9Y3T6 440 aaKnown RBP15.7■□□□□ 0.1
SHMT2-210ENST00000553950 ITIH6Q6UXX5 1313 aa15.69■□□□□ 0.1
SHMT2-210ENST00000553950 TPM1P09493 284 aa15.69■□□□□ 0.1
SHMT2-210ENST00000553950 KCNE1P15382 129 aa15.69■□□□□ 0.1
SHMT2-210ENST00000553950 RFX1P22670 979 aa15.69■□□□□ 0.1
SHMT2-210ENST00000553950 ZNF75DP51815 510 aa15.69■□□□□ 0.1
SHMT2-210ENST00000553950 SLC10A6Q3KNW5 377 aa15.69■□□□□ 0.1
SHMT2-210ENST00000553950 SEZ6Q53EL9 994 aa15.69■□□□□ 0.1
SHMT2-210ENST00000553950 GBP6Q6ZN66 633 aa15.69■□□□□ 0.1
SHMT2-210ENST00000553950 ABI1Q8IZP0 508 aa15.69■□□□□ 0.1
SHMT2-210ENST00000553950 ZSWIM2Q8NEG5 633 aa15.69■□□□□ 0.1
SHMT2-210ENST00000553950 BEST2Q8NFU1 509 aa15.69■□□□□ 0.1
SHMT2-210ENST00000553950 URGCPQ8TCY9 931 aa15.69■□□□□ 0.1
SHMT2-210ENST00000553950 FAM81BQ96LP2 452 aa15.69■□□□□ 0.1
SHMT2-210ENST00000553950 ERGIC2Q96RQ1 377 aa15.69■□□□□ 0.1
SHMT2-210ENST00000553950 LBHD1Q9BQE6 289 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-210ENST00000553950 INTS13Q9NVM9 706 aa15.69■□□□□ 0.1
SHMT2-210ENST00000553950 ITGA11Q9UKX5 1188 aa15.69■□□□□ 0.1
SHMT2-210ENST00000553950 UBQLN1Q9UMX0 589 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms