RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 PANK2Q9BZ23 570 aa9.15□□□□□ -0.94
PSEN1-209ENST00000553855 GBP3Q9H0R5 595 aa9.15□□□□□ -0.94
PSEN1-209ENST00000553855 POLD4Q9HCU8 107 aa9.15□□□□□ -0.94
PSEN1-209ENST00000553855 STK39Q9UEW8 545 aa9.15□□□□□ -0.94
PSEN1-209ENST00000553855 GIT1Q9Y2X7 761 aa9.15□□□□□ -0.94
PSEN1-209ENST00000553855 IPPQ9Y573 584 aa9.15□□□□□ -0.94
PSEN1-209ENST00000553855 WDR81Q562E7 1941 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 A0A1B0GUA9 196 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 C5orf67F2Z3F1 127 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 K7ENM7 598 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 B4GALT5O43286 388 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 ZC3H11AO75152 810 aaKnown RBP eCLIP9.14□□□□□ -0.95
PSEN1-209ENST00000553855 ARHGEF15O94989 841 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 IDEP14735 1019 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 GAP43P17677 238 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 CA8P35219 290 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 GATMP50440 423 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 UBE3AQ05086 875 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 PKP1Q13835 747 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 ADGRE1Q14246 886 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 AGERQ15109 404 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 ZNF568Q3ZCX4 644 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 KCNT2Q6UVM3 1135 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 STXBP4Q6ZWJ1 553 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 DYMQ7RTS9 669 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 MRPL10Q7Z7H8 261 aaKnown RBP9.14□□□□□ -0.95
PSEN1-209ENST00000553855 ZNF598Q86UK7 904 aaKnown RBP9.14□□□□□ -0.95
PSEN1-209ENST00000553855 FAM178BQ8IXR5 827 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 CCDC65Q8IXS2 484 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 CRIPAKQ8N1N5 446 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 ZNF511Q8NB15 262 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 COLGALT1Q8NBJ5 622 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 C1orf216Q8TAB5 229 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 FOXJ1Q92949 421 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 LPPQ93052 612 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 DHX58Q96C10 678 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 TMEM169Q96HH4 297 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 REEP2Q9BRK0 252 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 NTPCRQ9BSD7 190 aaKnown RBP9.14□□□□□ -0.95
PSEN1-209ENST00000553855 KIFC3Q9BVG8 833 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 CCDC94Q9BW85 323 aaPredicted RBP9.14□□□□□ -0.95
PSEN1-209ENST00000553855 EIF2AQ9BY44 585 aaKnown RBP9.14□□□□□ -0.95
PSEN1-209ENST00000553855 MAGEF1Q9HAY2 307 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 RC3H2Q9HBD1 1191 aaKnown RBP9.14□□□□□ -0.95
PSEN1-209ENST00000553855 TOPORSQ9NS56 1045 aaPredicted RBP9.14□□□□□ -0.95
PSEN1-209ENST00000553855 BLOC1S4Q9NUP1 217 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 SPG21Q9NZD8 308 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 SEL1LQ9UBV2 794 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 RCOR1Q9UKL0 485 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 EXOC7Q9UPT5 735 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 MTCH2Q9Y6C9 303 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 SIP14410 1827 aa9.14□□□□□ -0.95
PSEN1-209ENST00000553855 COL4A6Q14031 1691 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 NPHP3-ACAD11A0A0J9YXS1 232 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 FSD2A1L4K1 749 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 SOWAHDA6NJG2 315 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 NCK2O43639 380 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 OFD1O75665 1012 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 FGF18O76093 207 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 ALDH2P05091 517 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 POU3F3P20264 500 aaPredicted RBP9.13□□□□□ -0.95
PSEN1-209ENST00000553855 LIG4P49917 911 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 SEC13P55735 322 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 MAPK7Q13164 816 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 GIT2Q14161 759 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 KYAT1Q16773 422 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 AAK1Q2M2I8 961 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 LINC01559Q495D7 138 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 HERC4Q5GLZ8 1057 aaPredicted RBP9.13□□□□□ -0.95
PSEN1-209ENST00000553855 CLLU1OSQ5K130 101 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 UBXN11Q5T124 520 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 PDE12Q6L8Q7 609 aaKnown RBP9.13□□□□□ -0.95
PSEN1-209ENST00000553855 AGMOQ6ZNB7 445 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 USP49Q70CQ1 688 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 HAUS6Q7Z4H7 955 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 CDR2LQ86X02 465 aaPredicted RBP9.13□□□□□ -0.95
PSEN1-209ENST00000553855 DAW1Q8N136 415 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 KLHL23Q8NBE8 558 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 POF1BQ8WVV4 589 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 CCDC47Q96A33 483 aaKnown RBP9.13□□□□□ -0.95
PSEN1-209ENST00000553855 TNMDQ9H2S6 317 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 PDZD7Q9H5P4 517 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 NSUN3Q9H649 340 aaKnown RBP9.13□□□□□ -0.95
PSEN1-209ENST00000553855 ALG13Q9NP73 1137 aaKnown RBP9.13□□□□□ -0.95
PSEN1-209ENST00000553855 ARHGAP28Q9P2N2 729 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 PCDHA7Q9UN72 937 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 TNFSF13BQ9Y275 285 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 LOXHD1Q8IVV2 1947 aa9.13□□□□□ -0.95
PSEN1-209ENST00000553855 ARID2Q68CP9 1835 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 EPOPA6NHQ4 379 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 HNRNPDLO14979 420 aaKnown RBP9.12□□□□□ -0.95
PSEN1-209ENST00000553855 POLR2DO15514 142 aaKnown RBP9.12□□□□□ -0.95
PSEN1-209ENST00000553855 CLDN3O15551 220 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 TOM1L1O75674 476 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 CSPG5O95196 566 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 POMCP01189 267 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 SRGAP2BP0DMP2 458 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 MAPTP10636 758 aaKnown RBP9.12□□□□□ -0.95
PSEN1-209ENST00000553855 MCF2P10911 925 aa9.12□□□□□ -0.95
PSEN1-209ENST00000553855 HARSP12081 509 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms