RNA–Protein interactions for RNA: ENST00000553798.5

PSMC6-204, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-204ENST00000553798 PRPF40AO75400 957 aaKnown RBP12.72□□□□□ -0.37
PSMC6-204ENST00000553798 FGF18O76093 207 aa12.72□□□□□ -0.37
PSMC6-204ENST00000553798 SLC34A2O95436 690 aa12.72□□□□□ -0.37
PSMC6-204ENST00000553798 ALDH2P05091 517 aa12.72□□□□□ -0.37
PSMC6-204ENST00000553798 THP07101 528 aa12.72□□□□□ -0.37
PSMC6-204ENST00000553798 KCNE1P15382 129 aa12.72□□□□□ -0.37
PSMC6-204ENST00000553798 GARTP22102 1010 aa12.72□□□□□ -0.37
PSMC6-204ENST00000553798 YARSP54577 528 aaKnown RBP12.72□□□□□ -0.37
PSMC6-204ENST00000553798 SNRPFP62306 86 aaKnown RBP12.72□□□□□ -0.37
PSMC6-204ENST00000553798 STK4Q13043 487 aa12.72□□□□□ -0.37
PSMC6-204ENST00000553798 CAMK1Q14012 370 aa12.72□□□□□ -0.37
PSMC6-204ENST00000553798 SLC10A6Q3KNW5 377 aa12.72□□□□□ -0.37
PSMC6-204ENST00000553798 KIAA0895Q8NCT3 520 aa12.72□□□□□ -0.37
PSMC6-204ENST00000553798 MRPL38Q96DV4 380 aaKnown RBP12.72□□□□□ -0.37
PSMC6-204ENST00000553798 SNX27Q96L92 541 aa12.72□□□□□ -0.37
PSMC6-204ENST00000553798 PPP1R10Q96QC0 940 aaKnown RBP12.72□□□□□ -0.37
PSMC6-204ENST00000553798 RPS6KC1Q96S38 1066 aa12.72□□□□□ -0.37
PSMC6-204ENST00000553798 TSPAN18Q96SJ8 248 aa12.72□□□□□ -0.37
PSMC6-204ENST00000553798 MSTO1Q9BUK6 570 aa12.72□□□□□ -0.37
PSMC6-204ENST00000553798 SLC39A2Q9NP94 309 aa12.72□□□□□ -0.37
PSMC6-204ENST00000553798 CNTN3Q9P232 1028 aa12.72□□□□□ -0.37
PSMC6-204ENST00000553798 DNAJB4Q9UDY4 337 aa12.72□□□□□ -0.37
PSMC6-204ENST00000553798 CPSF3Q9UKF6 684 aaKnown RBP12.72□□□□□ -0.37
PSMC6-204ENST00000553798 CDH23Q9H251 3354 aa12.72□□□□□ -0.37
PSMC6-204ENST00000553798 PRRC2BQ5JSZ5 2229 aaKnown RBP12.72□□□□□ -0.37
PSMC6-204ENST00000553798 COL4A4P53420 1690 aaPredicted RBP12.71□□□□□ -0.37
PSMC6-204ENST00000553798 TDRD15B5MCY1 1934 aaKnown RBP12.71□□□□□ -0.37
PSMC6-204ENST00000553798 SMIM28A0A1B0GU29 152 aa12.71□□□□□ -0.37
PSMC6-204ENST00000553798 TTC26A0AVF1 554 aa12.71□□□□□ -0.37
PSMC6-204ENST00000553798 KIAA0391O15091 583 aaKnown RBP12.71□□□□□ -0.37
PSMC6-204ENST00000553798 GRM6O15303 877 aa12.71□□□□□ -0.37
PSMC6-204ENST00000553798 TGFB1I1O43294 461 aa12.71□□□□□ -0.37
PSMC6-204ENST00000553798 KINO60870 393 aaKnown RBP12.71□□□□□ -0.37
PSMC6-204ENST00000553798 ZC3H11AO75152 810 aaKnown RBP eCLIP12.71□□□□□ -0.37
PSMC6-204ENST00000553798 FOSL2P15408 326 aa12.71□□□□□ -0.37
PSMC6-204ENST00000553798 MATR3P43243 847 aaKnown RBP eCLIP12.71□□□□□ -0.37
PSMC6-204ENST00000553798 SLC11A1P49279 550 aa12.71□□□□□ -0.37
PSMC6-204ENST00000553798 OSTNP61366 133 aa12.71□□□□□ -0.37
PSMC6-204ENST00000553798 TUSC3Q13454 348 aa12.71□□□□□ -0.37
PSMC6-204ENST00000553798 PTPROQ16827 1216 aa12.71□□□□□ -0.37
PSMC6-204ENST00000553798 KNOP1Q1ED39 458 aaKnown RBP12.71□□□□□ -0.37
PSMC6-204ENST00000553798 SYCP3Q8IZU3 236 aa12.71□□□□□ -0.37
PSMC6-204ENST00000553798 TMEM174Q8WUU8 243 aa12.71□□□□□ -0.37
PSMC6-204ENST00000553798 CCDC47Q96A33 483 aaKnown RBP12.71□□□□□ -0.37
PSMC6-204ENST00000553798 MS4A3Q96HJ5 214 aa12.71□□□□□ -0.37
PSMC6-204ENST00000553798 IGSF21Q96ID5 467 aa12.71□□□□□ -0.37
PSMC6-204ENST00000553798 FAM193BQ96PV7 902 aaPredicted RBP12.71□□□□□ -0.37
PSMC6-204ENST00000553798 GSDMAQ96QA5 445 aa12.71□□□□□ -0.37
PSMC6-204ENST00000553798 GBP3Q9H0R5 595 aa12.71□□□□□ -0.37
PSMC6-204ENST00000553798 ALG13Q9NP73 1137 aaKnown RBP12.71□□□□□ -0.37
PSMC6-204ENST00000553798 CGNQ9P2M7 1197 aaKnown RBP12.71□□□□□ -0.37
PSMC6-204ENST00000553798 HOOK1Q9UJC3 728 aaKnown RBP12.71□□□□□ -0.37
PSMC6-204ENST00000553798 AGO2Q9UKV8 859 aaKnown RBP12.71□□□□□ -0.37
PSMC6-204ENST00000553798 CITO14578 2027 aa12.71□□□□□ -0.38
PSMC6-204ENST00000553798 NRP1O14786 923 aa12.7□□□□□ -0.38
PSMC6-204ENST00000553798 EFEMP2O95967 443 aa12.7□□□□□ -0.38
PSMC6-204ENST00000553798 HARSP12081 509 aaKnown RBP12.7□□□□□ -0.38
PSMC6-204ENST00000553798 IGFBP4P22692 258 aa12.7□□□□□ -0.38
PSMC6-204ENST00000553798 DNAJB1P25685 340 aa12.7□□□□□ -0.38
PSMC6-204ENST00000553798 PBX3P40426 434 aa12.7□□□□□ -0.38
PSMC6-204ENST00000553798 TNFSF9P41273 254 aa12.7□□□□□ -0.38
PSMC6-204ENST00000553798 KRT17Q04695 432 aa12.7□□□□□ -0.38
PSMC6-204ENST00000553798 PNOCQ13519 176 aa12.7□□□□□ -0.38
PSMC6-204ENST00000553798 ZBTB6Q15916 424 aa12.7□□□□□ -0.38
PSMC6-204ENST00000553798 ENOX2Q16206 610 aaKnown RBP12.7□□□□□ -0.38
PSMC6-204ENST00000553798 SEZ6Q53EL9 994 aa12.7□□□□□ -0.38
PSMC6-204ENST00000553798 ZBTB41Q5SVQ8 909 aa12.7□□□□□ -0.38
PSMC6-204ENST00000553798 PDE12Q6L8Q7 609 aaKnown RBP12.7□□□□□ -0.38
PSMC6-204ENST00000553798 CRELD2Q6UXH1 353 aaPredicted RBP12.7□□□□□ -0.38
PSMC6-204ENST00000553798 TMEM173Q86WV6 379 aaPredicted RBP12.7□□□□□ -0.38
PSMC6-204ENST00000553798 CD302Q8IX05 232 aa12.7□□□□□ -0.38
PSMC6-204ENST00000553798 POMGNT1Q8WZA1 660 aa12.7□□□□□ -0.38
PSMC6-204ENST00000553798 ZMAT2Q96NC0 199 aaKnown RBP12.7□□□□□ -0.38
PSMC6-204ENST00000553798 GBP4Q96PP9 640 aa12.7□□□□□ -0.38
PSMC6-204ENST00000553798 SLC38A7Q9NVC3 462 aa12.7□□□□□ -0.38
PSMC6-204ENST00000553798 STK39Q9UEW8 545 aa12.7□□□□□ -0.38
PSMC6-204ENST00000553798 PUF60Q9UHX1 559 aaKnown RBP12.7□□□□□ -0.38
PSMC6-204ENST00000553798 FAN1Q9Y2M0 1017 aa12.7□□□□□ -0.38
PSMC6-204ENST00000553798 PCDHA5Q9Y5H7 936 aa12.7□□□□□ -0.38
PSMC6-204ENST00000553798 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.7□□□□□ -0.38
PSMC6-204ENST00000553798 TRIP11Q15643 1979 aa12.7□□□□□ -0.38
PSMC6-204ENST00000553798 MYO7AQ13402 2215 aa12.69□□□□□ -0.38
PSMC6-204ENST00000553798 NT5C1B-RDH14C9J2C7 533 aa12.69□□□□□ -0.38
PSMC6-204ENST00000553798 SMC2O95347 1197 aa12.69□□□□□ -0.38
PSMC6-204ENST00000553798 LDHAP00338 332 aaKnown RBP12.69□□□□□ -0.38
PSMC6-204ENST00000553798 CXCL8P10145 99 aa12.69□□□□□ -0.38
PSMC6-204ENST00000553798 C7P10643 843 aa12.69□□□□□ -0.38
PSMC6-204ENST00000553798 ACOT2P49753 483 aa12.69□□□□□ -0.38
PSMC6-204ENST00000553798 DDX53Q86TM3 631 aaKnown RBP12.69□□□□□ -0.38
PSMC6-204ENST00000553798 C12orf56Q8IXR9 622 aa12.69□□□□□ -0.38
PSMC6-204ENST00000553798 GOLGA5Q8TBA6 731 aa12.69□□□□□ -0.38
PSMC6-204ENST00000553798 BCL7CQ8WUZ0 217 aaPredicted RBP12.69□□□□□ -0.38
PSMC6-204ENST00000553798 POF1BQ8WVV4 589 aa12.69□□□□□ -0.38
PSMC6-204ENST00000553798 SLC39A7Q92504 469 aa12.69□□□□□ -0.38
PSMC6-204ENST00000553798 TMEM169Q96HH4 297 aa12.69□□□□□ -0.38
PSMC6-204ENST00000553798 FBXL18Q96ME1 805 aa12.69□□□□□ -0.38
PSMC6-204ENST00000553798 UROC1Q96N76 676 aa12.69□□□□□ -0.38
PSMC6-204ENST00000553798 CBWD1Q9BRT8 395 aa12.69□□□□□ -0.38
PSMC6-204ENST00000553798 GTPBP4Q9BZE4 634 aaKnown RBP12.69□□□□□ -0.38
PSMC6-204ENST00000553798 KCTD10Q9H3F6 313 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms