RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 DUSP15Q9H1R2 295 aaPredicted RBP13.18□□□□□ -0.3
SNRPF-205ENST00000553192 SPAG17Q6Q759 2223 aa13.18□□□□□ -0.3
SNRPF-205ENST00000553192 WDR81Q562E7 1941 aa13.17□□□□□ -0.3
SNRPF-205ENST00000553192 TICRRQ7Z2Z1 1910 aa13.17□□□□□ -0.3
SNRPF-205ENST00000553192 CCDC163A0A0D9SF12 145 aa13.17□□□□□ -0.3
SNRPF-205ENST00000553192 FAM221BA6H8Z2 402 aa13.17□□□□□ -0.3
SNRPF-205ENST00000553192 MAFO75444 373 aaPredicted RBP13.17□□□□□ -0.3
SNRPF-205ENST00000553192 TADA2AO75478 443 aa13.17□□□□□ -0.3
SNRPF-205ENST00000553192 AKAP3O75969 853 aa13.17□□□□□ -0.3
SNRPF-205ENST00000553192 CCDC192P0DO97 292 aa13.17□□□□□ -0.3
SNRPF-205ENST00000553192 CCR2P41597 374 aa13.17□□□□□ -0.3
SNRPF-205ENST00000553192 DNM2P50570 870 aa13.17□□□□□ -0.3
SNRPF-205ENST00000553192 ADCY7P51828 1080 aa13.17□□□□□ -0.3
SNRPF-205ENST00000553192 NAPAP54920 295 aa13.17□□□□□ -0.3
SNRPF-205ENST00000553192 CCINQ13939 588 aa13.17□□□□□ -0.3
SNRPF-205ENST00000553192 DGKKQ5KSL6 1271 aa13.17□□□□□ -0.3
SNRPF-205ENST00000553192 TMTC3Q6ZXV5 915 aa13.17□□□□□ -0.3
SNRPF-205ENST00000553192 TEX2Q8IWB9 1127 aa13.17□□□□□ -0.3
SNRPF-205ENST00000553192 LENG9Q96B70 501 aa13.17□□□□□ -0.3
SNRPF-205ENST00000553192 SEPT9Q9UHD8 586 aaPredicted RBP13.17□□□□□ -0.3
SNRPF-205ENST00000553192 SF3B1O75533 1304 aaKnown RBP eCLIP13.16□□□□□ -0.3
SNRPF-205ENST00000553192 CELSR3Q9NYQ7 3312 aa13.16□□□□□ -0.3
SNRPF-205ENST00000553192 WDR27A2RRH5 827 aa13.16□□□□□ -0.3
SNRPF-205ENST00000553192 SLC38A8A6NNN8 435 aa13.16□□□□□ -0.3
SNRPF-205ENST00000553192 ZNF263O14978 683 aa13.16□□□□□ -0.3
SNRPF-205ENST00000553192 MOSPD3O75425 235 aa13.16□□□□□ -0.3
SNRPF-205ENST00000553192 OR1D2P34982 312 aa13.16□□□□□ -0.3
SNRPF-205ENST00000553192 HSP90AA2PQ14568 343 aaPredicted RBP13.16□□□□□ -0.3
SNRPF-205ENST00000553192 FAM171A1Q5VUB5 890 aa13.16□□□□□ -0.3
SNRPF-205ENST00000553192 JAKMIP3Q5VZ66 844 aa13.16□□□□□ -0.3
SNRPF-205ENST00000553192 SRGAP1Q7Z6B7 1085 aa13.16□□□□□ -0.3
SNRPF-205ENST00000553192 RALYLQ86SE5 291 aaKnown RBP13.16□□□□□ -0.3
SNRPF-205ENST00000553192 CEP57Q86XR8 500 aa13.16□□□□□ -0.3
SNRPF-205ENST00000553192 DEPDC1BQ8WUY9 529 aa13.16□□□□□ -0.3
SNRPF-205ENST00000553192 SMARCD2Q92925 531 aa13.16□□□□□ -0.3
SNRPF-205ENST00000553192 RSPRY1Q96DX4 576 aa13.16□□□□□ -0.3
SNRPF-205ENST00000553192 APOL6Q9BWW8 343 aa13.16□□□□□ -0.3
SNRPF-205ENST00000553192 TCEAL9Q9UHQ7 104 aa13.16□□□□□ -0.3
SNRPF-205ENST00000553192 RCAN3Q9UKA8 241 aa13.16□□□□□ -0.3
SNRPF-205ENST00000553192 UNC79Q9P2D8 2635 aa13.16□□□□□ -0.3
SNRPF-205ENST00000553192 CACNA1EQ15878 2313 aa13.16□□□□□ -0.3
SNRPF-205ENST00000553192 BCLAF3A2AJT9 711 aaKnown RBP13.15□□□□□ -0.3
SNRPF-205ENST00000553192 SMCO2A6NFE2 343 aa13.15□□□□□ -0.3
SNRPF-205ENST00000553192 KIF4AO95239 1232 aa13.15□□□□□ -0.3
SNRPF-205ENST00000553192 CAVIN2O95810 425 aa13.15□□□□□ -0.3
SNRPF-205ENST00000553192 PTPN2P17706 415 aa13.15□□□□□ -0.3
SNRPF-205ENST00000553192 FGD1P98174 961 aa13.15□□□□□ -0.3
SNRPF-205ENST00000553192 SETQ01105 290 aaPredicted RBP13.15□□□□□ -0.3
SNRPF-205ENST00000553192 CREB5Q02930 508 aa13.15□□□□□ -0.3
SNRPF-205ENST00000553192 PRR16Q569H4 304 aa13.15□□□□□ -0.3
SNRPF-205ENST00000553192 PPP1R18Q6NYC8 613 aa13.15□□□□□ -0.3
SNRPF-205ENST00000553192 GLIS3Q8NEA6 775 aa13.15□□□□□ -0.3
SNRPF-205ENST00000553192 MSANTD3Q96H12 275 aa13.15□□□□□ -0.3
SNRPF-205ENST00000553192 TMEM9BQ9NQ34 198 aa13.15□□□□□ -0.3
SNRPF-205ENST00000553192 POLR3BQ9NW08 1133 aaPredicted RBP13.15□□□□□ -0.3
SNRPF-205ENST00000553192 ZBTB47Q9UFB7 747 aaPredicted RBP13.15□□□□□ -0.3
SNRPF-205ENST00000553192 GIT1Q9Y2X7 761 aa13.15□□□□□ -0.3
SNRPF-205ENST00000553192 COL4A3BPQ9Y5P4 624 aa13.15□□□□□ -0.3
SNRPF-205ENST00000553192 U3KPZ7 1027 aaPredicted RBP13.15□□□□□ -0.3
SNRPF-205ENST00000553192 CNTNAP5Q8WYK1 1306 aa13.14□□□□□ -0.31
SNRPF-205ENST00000553192 SPAARA0A1B0GVQ0 90 aa13.14□□□□□ -0.31
SNRPF-205ENST00000553192 ARHGEF37A1IGU5 675 aa13.14□□□□□ -0.31
SNRPF-205ENST00000553192 MYBPHLA2RUH7 354 aa13.14□□□□□ -0.31
SNRPF-205ENST00000553192 SPECC1L-ADORA2AF8WAN1 911 aa13.14□□□□□ -0.31
SNRPF-205ENST00000553192 EDIL3O43854 480 aa13.14□□□□□ -0.31
SNRPF-205ENST00000553192 TSPAN1O60635 241 aa13.14□□□□□ -0.31
SNRPF-205ENST00000553192 MICAL2O94851 1124 aa13.14□□□□□ -0.31
SNRPF-205ENST00000553192 AKAP5P24588 427 aa13.14□□□□□ -0.31
SNRPF-205ENST00000553192 IGFBP6P24592 240 aaPredicted RBP13.14□□□□□ -0.31
SNRPF-205ENST00000553192 CTHP32929 405 aa13.14□□□□□ -0.31
SNRPF-205ENST00000553192 PTH1RQ03431 593 aa13.14□□□□□ -0.31
SNRPF-205ENST00000553192 XKR3Q5GH77 459 aa13.14□□□□□ -0.31
SNRPF-205ENST00000553192 C1orf228Q6PIY5 440 aa13.14□□□□□ -0.31
SNRPF-205ENST00000553192 RTL10Q7L3V2 364 aa13.14□□□□□ -0.31
SNRPF-205ENST00000553192 MFSD6LQ8IWD5 586 aa13.14□□□□□ -0.31
SNRPF-205ENST00000553192 GJA10Q969M2 543 aa13.14□□□□□ -0.31
SNRPF-205ENST00000553192 UNC45AQ9H3U1 944 aa13.14□□□□□ -0.31
SNRPF-205ENST00000553192 NXF3Q9H4D5 531 aaKnown RBP13.14□□□□□ -0.31
SNRPF-205ENST00000553192 C8orf33Q9H7E9 229 aaPredicted RBP13.14□□□□□ -0.31
SNRPF-205ENST00000553192 TRPV4Q9HBA0 871 aa13.14□□□□□ -0.31
SNRPF-205ENST00000553192 ASXL3Q9C0F0 2248 aa13.14□□□□□ -0.31
SNRPF-205ENST00000553192 HEPACAM2A8MVW5 462 aa13.13□□□□□ -0.31
SNRPF-205ENST00000553192 PATE3B3GLJ2 98 aa13.13□□□□□ -0.31
SNRPF-205ENST00000553192 SH2B2O14492 632 aaPredicted RBP13.13□□□□□ -0.31
SNRPF-205ENST00000553192 DCLK1O15075 740 aa13.13□□□□□ -0.31
SNRPF-205ENST00000553192 CHMP2AO43633 222 aa13.13□□□□□ -0.31
SNRPF-205ENST00000553192 PRB1P04280 392 aa13.13□□□□□ -0.31
SNRPF-205ENST00000553192 SRGAP2CP0DJJ0 459 aa13.13□□□□□ -0.31
SNRPF-205ENST00000553192 CIITAP33076 1130 aa13.13□□□□□ -0.31
SNRPF-205ENST00000553192 SCAPQ12770 1279 aa13.13□□□□□ -0.31
SNRPF-205ENST00000553192 GRIK3Q13003 919 aa13.13□□□□□ -0.31
SNRPF-205ENST00000553192 PON2Q15165 354 aa13.13□□□□□ -0.31
SNRPF-205ENST00000553192 ANO5Q75V66 913 aa13.13□□□□□ -0.31
SNRPF-205ENST00000553192 SYNPOQ8N3V7 929 aa13.13□□□□□ -0.31
SNRPF-205ENST00000553192 HNRNPLLQ8WVV9 542 aaKnown RBP13.13□□□□□ -0.31
SNRPF-205ENST00000553192 CPB2Q96IY4 423 aa13.13□□□□□ -0.31
SNRPF-205ENST00000553192 CORO1BQ9BR76 489 aa13.13□□□□□ -0.31
SNRPF-205ENST00000553192 LNPKQ9C0E8 428 aa13.13□□□□□ -0.31
SNRPF-205ENST00000553192 KLK14Q9P0G3 267 aa13.13□□□□□ -0.31
SNRPF-205ENST00000553192 MTRRQ9UBK8 725 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms