RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 DPYDQ12882 1025 aa11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 SNW1Q13573 536 aaKnown RBP11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 SMC1AQ14683 1233 aaKnown RBP11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 COBLL1Q53SF7 1204 aa11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 KIAA1841Q6NSI8 718 aa11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 ALKAL1Q6UXT8 129 aa11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 EPM2AIP1Q7L775 607 aaPredicted RBP11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 TMCO2Q7Z6W1 182 aaPredicted RBP11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 SLC9A9Q8IVB4 645 aa11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 SLC39A11Q8N1S5 342 aa11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 GUF1Q8N442 669 aaKnown RBP11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 KLHL23Q8NBE8 558 aa11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 ENGASEQ8NFI3 743 aa11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 MICAL1Q8TDZ2 1067 aa11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 STAMQ92783 540 aa11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 LPPQ93052 612 aa11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 IGSF21Q96ID5 467 aa11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 SNX27Q96L92 541 aa11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 TSG101Q99816 390 aa11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 C17orf80Q9BSJ5 609 aa11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 EMILIN2Q9BXX0 1053 aa11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 NSUN3Q9H649 340 aaKnown RBP11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 CWH43Q9H720 699 aa11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 RNF19AQ9NV58 838 aa11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 MTUS1Q9ULD2 1270 aa11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 FRMD4BQ9Y2L6 1034 aa11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 FNDC1Q4ZHG4 1894 aaPredicted RBP11.17□□□□□ -0.62
TRAFD1-208ENST00000552890 SMIM28A0A1B0GU29 152 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 PSMA7O14818 248 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 MAPK13O15264 365 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 FGFR1OPO95684 399 aaKnown RBP11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 POMCP01189 267 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 ADRB2P07550 413 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 HARSP12081 509 aaKnown RBP11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 PNPLA4P41247 253 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 SCNN1GP51170 649 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 NFIL3Q16649 462 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 USP41Q3LFD5 358 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 PUS10Q3MIT2 529 aaKnown RBP11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 KMT5BQ4FZB7 885 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 ZC2HC1CQ53FD0 456 aaPredicted RBP11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 EEF1DP3Q658K8 133 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 FOXR2Q6PJQ5 311 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 TMC7Q7Z402 723 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 COLGALT2Q8IYK4 626 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 GPD1LQ8N335 351 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 XXYLT1Q8NBI6 393 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 SPPL3Q8TCT6 385 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 FAM161BQ96MY7 647 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 PPP1R10Q96QC0 940 aaKnown RBP11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 FNBP1Q96RU3 617 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 DNAI2Q9GZS0 605 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 BLZF1Q9H2G9 400 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 NRDE2Q9H7Z3 1164 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 ENTPD7Q9NQZ7 604 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 MRPL17Q9NRX2 175 aaKnown RBP11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 CPSF3Q9UKF6 684 aaKnown RBP11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 ADAM28Q9UKQ2 775 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 HES2Q9Y543 173 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 IRAK3Q9Y616 596 aa11.16□□□□□ -0.62
TRAFD1-208ENST00000552890 TTC26A0AVF1 554 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 BICDL2A1A5D9 508 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 ABLIM1O14639 778 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 NRP1O14786 923 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 STX10O60499 249 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 PRPF6O94906 941 aaKnown RBP11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 ITGB1P05556 798 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 URODP06132 367 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 MYBP10242 640 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 TMEM132DQ14C87 1099 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 EDRF1Q3B7T1 1238 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 CT47A1Q5JQC4 288 aaPredicted RBP11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 ZNF658Q5TYW1 1059 aaPredicted RBP11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 LRRC55Q6ZSA7 311 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 Q7L0L9 218 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 RTL10Q7L3V2 364 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 CDR2LQ86X02 465 aaPredicted RBP11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 APPL2Q8NEU8 664 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 MAFAQ8NHW3 353 aaPredicted RBP11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 SPATA20Q8TB22 786 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 POF1BQ8WVV4 589 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 SYAP1Q96A49 352 aaPredicted RBP11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 KIF12Q96FN5 646 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 DHTKD1Q96HY7 919 aaPredicted RBP11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 ZFP42Q96MM3 310 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 GUCD1Q96NT3 240 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 RNF39Q9H2S5 420 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 GOLPH3LQ9H4A5 285 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 SLC39A2Q9NP94 309 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 DACH1Q9UI36 760 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 DSEQ9UL01 958 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 NUB1Q9Y5A7 615 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 MTCH2Q9Y6C9 303 aa11.15□□□□□ -0.62
TRAFD1-208ENST00000552890 GBF1Q92538 1859 aa11.15□□□□□ -0.63
TRAFD1-208ENST00000552890 PTPRSQ13332 1948 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 H7C4K7 107 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 KLRC4O43908 158 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 EXOC3O60645 756 aa11.14□□□□□ -0.63
TRAFD1-208ENST00000552890 B3GAT3O94766 335 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms