RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 TMEM192Q8IY95 271 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 LRRC43Q8N309 656 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 SP7Q8TDD2 431 aaPredicted RBP10.84□□□□□ -0.67
LETMD1-234ENST00000552645 POMGNT1Q8WZA1 660 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 HVCN1Q96D96 273 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 FAM193BQ96PV7 902 aaPredicted RBP10.84□□□□□ -0.67
LETMD1-234ENST00000552645 TGS1Q96RS0 853 aaKnown RBP10.84□□□□□ -0.67
LETMD1-234ENST00000552645 RPS6KC1Q96S38 1066 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 MSTO1Q9BUK6 570 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 ST6GALNAC4Q9H4F1 302 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 PRDM12Q9H4Q4 367 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 RC3H2Q9HBD1 1191 aaKnown RBP10.84□□□□□ -0.67
LETMD1-234ENST00000552645 PTPRHQ9HD43 1115 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 UBN1Q9NPG3 1134 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 KCND1Q9NSA2 647 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 RFXAPO00287 272 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 ZC3H11AO75152 810 aaKnown RBP eCLIP10.84□□□□□ -0.67
LETMD1-234ENST00000552645 PPP1R37O75864 691 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 MCF2P10911 925 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 PROZP22891 400 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 PBX3P40426 434 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 SCNN1GP51170 649 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 YARSP54577 528 aaKnown RBP10.84□□□□□ -0.67
LETMD1-234ENST00000552645 STK4Q13043 487 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 BMS1Q14692 1282 aaKnown RBP10.84□□□□□ -0.67
LETMD1-234ENST00000552645 CAMK4Q16566 473 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 SLC39A4Q6P5W5 647 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 LRRC55Q6ZSA7 311 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 TXLNBQ8N3L3 684 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 SMARCE1Q969G3 411 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 C16orf45Q96MC5 204 aaPredicted RBP10.84□□□□□ -0.67
LETMD1-234ENST00000552645 HAPLN2Q9GZV7 340 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 SEMA6BQ9H3T3 888 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 TMEM206Q9H813 350 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 TBC1D13Q9NVG8 400 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 MAPK8IP1Q9UQF2 711 aa10.84□□□□□ -0.67
LETMD1-234ENST00000552645 TRANK1O15050 2925 aa10.83□□□□□ -0.68
LETMD1-234ENST00000552645 COL4A4P53420 1690 aaPredicted RBP10.83□□□□□ -0.68
LETMD1-234ENST00000552645 EIF3DO15371 548 aaKnown RBP eCLIP10.83□□□□□ -0.68
LETMD1-234ENST00000552645 SMC2O95347 1197 aa10.83□□□□□ -0.68
LETMD1-234ENST00000552645 MCL1Q07820 350 aa10.83□□□□□ -0.68
LETMD1-234ENST00000552645 GRIN2CQ14957 1233 aa10.83□□□□□ -0.68
LETMD1-234ENST00000552645 EPC2Q52LR7 807 aa10.83□□□□□ -0.68
LETMD1-234ENST00000552645 CEP135Q66GS9 1140 aa10.83□□□□□ -0.68
LETMD1-234ENST00000552645 ISM2Q6H9L7 571 aa10.83□□□□□ -0.68
LETMD1-234ENST00000552645 FBXO22Q8NEZ5 403 aa10.83□□□□□ -0.68
LETMD1-234ENST00000552645 GDPD5Q8WTR4 605 aa10.83□□□□□ -0.68
LETMD1-234ENST00000552645 SCFD1Q8WVM8 642 aa10.83□□□□□ -0.68
LETMD1-234ENST00000552645 FAM212AQ96EL1 285 aa10.83□□□□□ -0.68
LETMD1-234ENST00000552645 ACAP3Q96P50 834 aa10.83□□□□□ -0.68
LETMD1-234ENST00000552645 STRA6Q9BX79 667 aa10.83□□□□□ -0.68
LETMD1-234ENST00000552645 MRPL9Q9BYD2 267 aaKnown RBP10.83□□□□□ -0.68
LETMD1-234ENST00000552645 CXCL16Q9H2A7 254 aa10.83□□□□□ -0.68
LETMD1-234ENST00000552645 PCIF1Q9H4Z3 704 aa10.83□□□□□ -0.68
LETMD1-234ENST00000552645 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.83□□□□□ -0.68
LETMD1-234ENST00000552645 GIT1Q9Y2X7 761 aa10.83□□□□□ -0.68
LETMD1-234ENST00000552645 PLXNA4Q9HCM2 1894 aa10.83□□□□□ -0.68
LETMD1-234ENST00000552645 A0A0B4J269 797 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 EPOPA6NHQ4 379 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 ABLIM1O14639 778 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 PIGRP01833 764 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 H2AFXP16104 143 aaPredicted RBP10.82□□□□□ -0.68
LETMD1-234ENST00000552645 IGFBP4P22692 258 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 HOXD13P35453 343 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 TNFSF9P41273 254 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 GRM5P41594 1212 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 ACOT2P49753 483 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 ERVK-21P61565 698 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 EHHADHQ08426 723 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 PSMD2Q13200 908 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 GLRA4Q5JXX5 417 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 ZBTB41Q5SVQ8 909 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 SLFN12LQ6IEE8 588 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 ARMCX5Q6P1M9 558 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 FBXO38Q6PIJ6 1188 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 NYAP1Q6ZVC0 841 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 EPM2AIP1Q7L775 607 aaPredicted RBP10.82□□□□□ -0.68
LETMD1-234ENST00000552645 ZNF280BQ86YH2 543 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 SMYD4Q8IYR2 804 aaPredicted RBP10.82□□□□□ -0.68
LETMD1-234ENST00000552645 KIAA0895Q8NCT3 520 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 SAAL1Q96ER3 474 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 CWH43Q9H720 699 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 AAASQ9NRG9 546 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 TOPORSQ9NS56 1045 aaPredicted RBP10.82□□□□□ -0.68
LETMD1-234ENST00000552645 MIOSQ9NXC5 875 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 KANSL3Q9P2N6 904 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 DNAJB4Q9UDY4 337 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 AGO2Q9UKV8 859 aaKnown RBP10.82□□□□□ -0.68
LETMD1-234ENST00000552645 PCDHB12Q9Y5F1 795 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 PCDHA5Q9Y5H7 936 aa10.82□□□□□ -0.68
LETMD1-234ENST00000552645 PDCD11Q14690 1871 aaKnown RBP10.81□□□□□ -0.68
LETMD1-234ENST00000552645 TMEM265A0A087WTH1 108 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 GOLGA8IPA6NC78 632 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 GOLGA8JA6NMD2 632 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 NT5C1B-RDH14C9J2C7 533 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 BIN1O00499 593 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 OGTO15294 1046 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 RHOBTB3O94955 611 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 CXCL8P10145 99 aa10.81□□□□□ -0.68
LETMD1-234ENST00000552645 LAG3P18627 525 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms