RNA–Protein interactions for RNA: ENST00000552351.5

CHPT1-210, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 1,524 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-210ENST00000552351 HOXD13P35453 343 aa29.4■■■□□ 2.3
CHPT1-210ENST00000552351 PNOCQ13519 176 aa29.4■■■□□ 2.3
CHPT1-210ENST00000552351 ADGRE1Q14246 886 aa29.4■■■□□ 2.3
CHPT1-210ENST00000552351 COLGALT2Q8IYK4 626 aa29.4■■■□□ 2.3
CHPT1-210ENST00000552351 SLC39A11Q8N1S5 342 aa29.4■■■□□ 2.3
CHPT1-210ENST00000552351 SPATA20Q8TB22 786 aa29.4■■■□□ 2.3
CHPT1-210ENST00000552351 TSPAN18Q96SJ8 248 aa29.4■■■□□ 2.3
CHPT1-210ENST00000552351 CNTN3Q9P232 1028 aa29.4■■■□□ 2.3
CHPT1-210ENST00000552351 LZTS1Q9Y250 596 aa29.4■■■□□ 2.3
CHPT1-210ENST00000552351 STXBP5LQ9Y2K9 1186 aa29.4■■■□□ 2.3
CHPT1-210ENST00000552351 GTF3C5Q9Y5Q8 519 aaPredicted RBP29.4■■■□□ 2.3
CHPT1-210ENST00000552351 PDCD11Q14690 1871 aaKnown RBP29.4■■■□□ 2.3
CHPT1-210ENST00000552351 PLXNA4Q9HCM2 1894 aa29.4■■■□□ 2.3
CHPT1-210ENST00000552351 GOLGA6L22H0YM25 854 aa29.4■■■□□ 2.3
CHPT1-210ENST00000552351 LDHAP00338 332 aaKnown RBP29.4■■■□□ 2.3
CHPT1-210ENST00000552351 ITGB1P05556 798 aa29.4■■■□□ 2.3
CHPT1-210ENST00000552351 KCNE1P15382 129 aa29.4■■■□□ 2.3
CHPT1-210ENST00000552351 TUSC3Q13454 348 aa29.4■■■□□ 2.3
CHPT1-210ENST00000552351 GTPBP4Q9BZE4 634 aaKnown RBP29.4■■■□□ 2.3
CHPT1-210ENST00000552351 SLC38A7Q9NVC3 462 aa29.4■■■□□ 2.3
CHPT1-210ENST00000552351 DNAJB4Q9UDY4 337 aa29.4■■■□□ 2.3
CHPT1-210ENST00000552351 STK39Q9UEW8 545 aa29.4■■■□□ 2.3
CHPT1-210ENST00000552351 CPSF3Q9UKF6 684 aaKnown RBP29.4■■■□□ 2.3
CHPT1-210ENST00000552351 KRT17Q04695 432 aa29.39■■■□□ 2.3
CHPT1-210ENST00000552351 KNOP1Q1ED39 458 aaKnown RBP29.39■■■□□ 2.3
CHPT1-210ENST00000552351 SLC10A6Q3KNW5 377 aa29.39■■■□□ 2.3
CHPT1-210ENST00000552351 HS2ST1Q7LGA3 356 aa29.39■■■□□ 2.3
CHPT1-210ENST00000552351 CD302Q8IX05 232 aa29.39■■■□□ 2.3
CHPT1-210ENST00000552351 MRPL38Q96DV4 380 aaKnown RBP29.39■■■□□ 2.3
CHPT1-210ENST00000552351 PPP1R10Q96QC0 940 aaKnown RBP29.39■■■□□ 2.3
CHPT1-210ENST00000552351 IKZF4Q9H2S9 585 aa29.39■■■□□ 2.3
CHPT1-210ENST00000552351 SMIM28A0A1B0GU29 152 aa29.38■■■□□ 2.29
CHPT1-210ENST00000552351 B4GALT3O60512 393 aa29.38■■■□□ 2.29
CHPT1-210ENST00000552351 ADRB2P07550 413 aa29.38■■■□□ 2.29
CHPT1-210ENST00000552351 SLC11A1P49279 550 aa29.38■■■□□ 2.29
CHPT1-210ENST00000552351 NAB2Q15742 525 aa29.38■■■□□ 2.29
CHPT1-210ENST00000552351 SEZ6Q53EL9 994 aa29.38■■■□□ 2.29
CHPT1-210ENST00000552351 GOLGA5Q8TBA6 731 aa29.38■■■□□ 2.29
CHPT1-210ENST00000552351 SPPL3Q8TCT6 385 aa29.38■■■□□ 2.29
CHPT1-210ENST00000552351 TMEM169Q96HH4 297 aa29.38■■■□□ 2.29
CHPT1-210ENST00000552351 RPF1Q9H9Y2 349 aaKnown RBP29.38■■■□□ 2.29
CHPT1-210ENST00000552351 ALG13Q9NP73 1137 aaKnown RBP29.38■■■□□ 2.29
CHPT1-210ENST00000552351 PUF60Q9UHX1 559 aaKnown RBP29.38■■■□□ 2.29
CHPT1-210ENST00000552351 FAN1Q9Y2M0 1017 aa29.38■■■□□ 2.29
CHPT1-210ENST00000552351 TTC26A0AVF1 554 aa29.37■■■□□ 2.29
CHPT1-210ENST00000552351 GRM6O15303 877 aa29.37■■■□□ 2.29
CHPT1-210ENST00000552351 PBX3P40426 434 aa29.37■■■□□ 2.29
CHPT1-210ENST00000552351 PPP2R3AQ06190 1150 aa29.37■■■□□ 2.29
CHPT1-210ENST00000552351 ARMCX5Q6P1M9 558 aa29.37■■■□□ 2.29
CHPT1-210ENST00000552351 SMARCE1Q969G3 411 aa29.37■■■□□ 2.29
CHPT1-210ENST00000552351 IGSF21Q96ID5 467 aa29.37■■■□□ 2.29
CHPT1-210ENST00000552351 MTCH2Q9Y6C9 303 aa29.37■■■□□ 2.29
CHPT1-210ENST00000552351 TGFB1I1O43294 461 aa29.36■■■□□ 2.29
CHPT1-210ENST00000552351 CXCL8P10145 99 aa29.36■■■□□ 2.29
CHPT1-210ENST00000552351 IGFBP4P22692 258 aa29.36■■■□□ 2.29
CHPT1-210ENST00000552351 TNFSF9P41273 254 aa29.36■■■□□ 2.29
CHPT1-210ENST00000552351 HSP90AA2PQ14568 343 aaPredicted RBP29.36■■■□□ 2.29
CHPT1-210ENST00000552351 ENOX2Q16206 610 aaKnown RBP29.36■■■□□ 2.29
CHPT1-210ENST00000552351 CXCL16Q9H2A7 254 aa29.36■■■□□ 2.29
CHPT1-210ENST00000552351 LMBRD1Q9NUN5 540 aa29.36■■■□□ 2.29
CHPT1-210ENST00000552351 PCDHA5Q9Y5H7 936 aa29.36■■■□□ 2.29
CHPT1-210ENST00000552351 NRP1O14786 923 aa29.35■■■□□ 2.29
CHPT1-210ENST00000552351 ZBTB41Q5SVQ8 909 aa29.35■■■□□ 2.29
CHPT1-210ENST00000552351 NELFCDQ8IXH7 590 aa29.35■■■□□ 2.29
CHPT1-210ENST00000552351 UROC1Q96N76 676 aa29.35■■■□□ 2.29
CHPT1-210ENST00000552351 AGPAT3Q9NRZ7 376 aa29.35■■■□□ 2.29
CHPT1-210ENST00000552351 ANK1P16157 1881 aa29.35■■■□□ 2.29
CHPT1-210ENST00000552351 MEFVO15553 781 aaPredicted RBP29.35■■■□□ 2.29
CHPT1-210ENST00000552351 OR1G1P47890 313 aa29.35■■■□□ 2.29
CHPT1-210ENST00000552351 ACOT2P49753 483 aa29.35■■■□□ 2.29
CHPT1-210ENST00000552351 GLRA4Q5JXX5 417 aa29.35■■■□□ 2.29
CHPT1-210ENST00000552351 PDE12Q6L8Q7 609 aaKnown RBP29.35■■■□□ 2.29
CHPT1-210ENST00000552351 C12orf56Q8IXR9 622 aa29.35■■■□□ 2.29
CHPT1-210ENST00000552351 TMEM174Q8WUU8 243 aa29.35■■■□□ 2.29
CHPT1-210ENST00000552351 POF1BQ8WVV4 589 aa29.35■■■□□ 2.29
CHPT1-210ENST00000552351 ZMAT2Q96NC0 199 aaKnown RBP29.35■■■□□ 2.29
CHPT1-210ENST00000552351 CBWD1Q9BRT8 395 aa29.35■■■□□ 2.29
CHPT1-210ENST00000552351 COLEC11Q9BWP8 271 aa29.35■■■□□ 2.29
CHPT1-210ENST00000552351 ASB7Q9H672 318 aa29.35■■■□□ 2.29
CHPT1-210ENST00000552351 NT5C1B-RDH14C9J2C7 533 aa29.34■■■□□ 2.29
CHPT1-210ENST00000552351 EXTL3O43909 919 aa29.34■■■□□ 2.29
CHPT1-210ENST00000552351 GUF1Q8N442 669 aaKnown RBP29.34■■■□□ 2.29
CHPT1-210ENST00000552351 KIAA1586Q9HCI6 787 aa29.34■■■□□ 2.29
CHPT1-210ENST00000552351 PRRC2BQ5JSZ5 2229 aaKnown RBP29.33■■■□□ 2.29
CHPT1-210ENST00000552351 TIGD5Q53EQ6 642 aa29.33■■■□□ 2.29
CHPT1-210ENST00000552351 CRELD2Q6UXH1 353 aaPredicted RBP29.33■■■□□ 2.29
CHPT1-210ENST00000552351 DDX53Q86TM3 631 aaKnown RBP29.33■■■□□ 2.29
CHPT1-210ENST00000552351 TMEM173Q86WV6 379 aaPredicted RBP29.33■■■□□ 2.29
CHPT1-210ENST00000552351 GPD1LQ8N335 351 aa29.33■■■□□ 2.29
CHPT1-210ENST00000552351 TLR9Q9NR96 1032 aa29.33■■■□□ 2.29
CHPT1-210ENST00000552351 DERAQ9Y315 318 aa29.33■■■□□ 2.29
CHPT1-210ENST00000552351 ATG2AQ2TAZ0 1938 aa29.32■■■□□ 2.28
CHPT1-210ENST00000552351 PDXKO00764 312 aa29.32■■■□□ 2.28
CHPT1-210ENST00000552351 XPOTO43592 962 aaKnown RBP29.32■■■□□ 2.28
CHPT1-210ENST00000552351 CAMK1Q14012 370 aa29.32■■■□□ 2.28
CHPT1-210ENST00000552351 COBLL1Q53SF7 1204 aa29.32■■■□□ 2.28
CHPT1-210ENST00000552351 ZNF658Q5TYW1 1059 aaPredicted RBP29.32■■■□□ 2.28
CHPT1-210ENST00000552351 DDX27Q96GQ7 796 aaKnown RBP29.32■■■□□ 2.28
CHPT1-210ENST00000552351 FAM213AQ9BRX8 229 aa29.32■■■□□ 2.28
CHPT1-210ENST00000552351 KCTD10Q9H3F6 313 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms