RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 DACH1Q9UI36 760 aa13.95□□□□□ -0.18
SNRPF-204ENST00000552085 PLXNB3Q9ULL4 1909 aa13.95□□□□□ -0.18
SNRPF-204ENST00000552085 ATG2BQ96BY7 2078 aa13.95□□□□□ -0.18
SNRPF-204ENST00000552085 FREM2Q5SZK8 3169 aa13.95□□□□□ -0.18
SNRPF-204ENST00000552085 SLC38A8A6NNN8 435 aa13.94□□□□□ -0.18
SNRPF-204ENST00000552085 FAM86B1E9PN63 330 aa13.94□□□□□ -0.18
SNRPF-204ENST00000552085 C1QL1O75973 258 aa13.94□□□□□ -0.18
SNRPF-204ENST00000552085 PLEKHA8P1O95397 391 aa13.94□□□□□ -0.18
SNRPF-204ENST00000552085 FAM86B2P0C5J1 330 aa13.94□□□□□ -0.18
SNRPF-204ENST00000552085 PTPN2P17706 415 aa13.94□□□□□ -0.18
SNRPF-204ENST00000552085 SDSP20132 328 aa13.94□□□□□ -0.18
SNRPF-204ENST00000552085 HOXA11P31270 313 aaPredicted RBP13.94□□□□□ -0.18
SNRPF-204ENST00000552085 SREBF1P36956 1147 aa13.94□□□□□ -0.18
SNRPF-204ENST00000552085 SOX9P48436 509 aa13.94□□□□□ -0.18
SNRPF-204ENST00000552085 KPNA1P52294 538 aaPredicted RBP13.94□□□□□ -0.18
SNRPF-204ENST00000552085 SIM1P81133 766 aaPredicted RBP13.94□□□□□ -0.18
SNRPF-204ENST00000552085 RAB33AQ14088 237 aa13.94□□□□□ -0.18
SNRPF-204ENST00000552085 SART3Q15020 963 aaKnown RBP13.94□□□□□ -0.18
SNRPF-204ENST00000552085 PRSS36Q5K4E3 855 aa13.94□□□□□ -0.18
SNRPF-204ENST00000552085 TXNDC11Q6PKC3 985 aa13.94□□□□□ -0.18
SNRPF-204ENST00000552085 CEP57Q86XR8 500 aa13.94□□□□□ -0.18
SNRPF-204ENST00000552085 KSR1Q8IVT5 923 aa13.94□□□□□ -0.18
SNRPF-204ENST00000552085 CHCHD4Q8N4Q1 142 aa13.94□□□□□ -0.18
SNRPF-204ENST00000552085 RABGGTAQ92696 567 aa13.94□□□□□ -0.18
SNRPF-204ENST00000552085 SMARCD2Q92925 531 aa13.94□□□□□ -0.18
SNRPF-204ENST00000552085 CCDC86Q9H6F5 360 aaKnown RBP13.94□□□□□ -0.18
SNRPF-204ENST00000552085 SUCLA2Q9P2R7 463 aaPredicted RBP13.94□□□□□ -0.18
SNRPF-204ENST00000552085 IPPQ9Y573 584 aa13.94□□□□□ -0.18
SNRPF-204ENST00000552085 IGLV3-22A0A075B6J6 115 aa13.93□□□□□ -0.18
SNRPF-204ENST00000552085 IGKV6-21A0A0C4DH24 114 aa13.93□□□□□ -0.18
SNRPF-204ENST00000552085 hCG_1642624A0A1W2PR95 340 aa13.93□□□□□ -0.18
SNRPF-204ENST00000552085 WDR27A2RRH5 827 aa13.93□□□□□ -0.18
SNRPF-204ENST00000552085 SPECC1L-ADORA2AF8WAN1 911 aa13.93□□□□□ -0.18
SNRPF-204ENST00000552085 MICAL2O94851 1124 aa13.93□□□□□ -0.18
SNRPF-204ENST00000552085 GNAQP50148 359 aa13.93□□□□□ -0.18
SNRPF-204ENST00000552085 CCINQ13939 588 aa13.93□□□□□ -0.18
SNRPF-204ENST00000552085 HEATR3Q7Z4Q2 680 aa13.93□□□□□ -0.18
SNRPF-204ENST00000552085 MFSD6LQ8IWD5 586 aa13.93□□□□□ -0.18
SNRPF-204ENST00000552085 CMTR1Q8N1G2 835 aaKnown RBP13.93□□□□□ -0.18
SNRPF-204ENST00000552085 FAM200AQ8TCP9 573 aa13.93□□□□□ -0.18
SNRPF-204ENST00000552085 RILPL2Q969X0 211 aa13.93□□□□□ -0.18
SNRPF-204ENST00000552085 TCEAL4Q96EI5 215 aa13.93□□□□□ -0.18
SNRPF-204ENST00000552085 UBL7Q96S82 380 aaPredicted RBP13.93□□□□□ -0.18
SNRPF-204ENST00000552085 IFT122Q9HBG6 1241 aa13.93□□□□□ -0.18
SNRPF-204ENST00000552085 SLC8A2Q9UPR5 921 aa13.93□□□□□ -0.18
SNRPF-204ENST00000552085 RAI2Q9Y5P3 530 aa13.93□□□□□ -0.18
SNRPF-204ENST00000552085 MYBPHLA2RUH7 354 aa13.92□□□□□ -0.18
SNRPF-204ENST00000552085 WDR64B1ANS9 1081 aa13.92□□□□□ -0.18
SNRPF-204ENST00000552085 TK2O00142 265 aa13.92□□□□□ -0.18
SNRPF-204ENST00000552085 ZNF197O14709 1029 aa13.92□□□□□ -0.18
SNRPF-204ENST00000552085 DDAH1O94760 285 aa13.92□□□□□ -0.18
SNRPF-204ENST00000552085 CTHP32929 405 aa13.92□□□□□ -0.18
SNRPF-204ENST00000552085 OR1D2P34982 312 aa13.92□□□□□ -0.18
SNRPF-204ENST00000552085 VIPR2P41587 438 aa13.92□□□□□ -0.18
SNRPF-204ENST00000552085 HSP90AA2PQ14568 343 aaPredicted RBP13.92□□□□□ -0.18
SNRPF-204ENST00000552085 PON2Q15165 354 aa13.92□□□□□ -0.18
SNRPF-204ENST00000552085 UGCGQ16739 394 aa13.92□□□□□ -0.18
SNRPF-204ENST00000552085 MTERF2Q49AM1 385 aa13.92□□□□□ -0.18
SNRPF-204ENST00000552085 FAM171A1Q5VUB5 890 aa13.92□□□□□ -0.18
SNRPF-204ENST00000552085 PKN3Q6P5Z2 889 aa13.92□□□□□ -0.18
SNRPF-204ENST00000552085 PDXDC1Q6P996 788 aa13.92□□□□□ -0.18
SNRPF-204ENST00000552085 CWC27Q6UX04 472 aaKnown RBP13.92□□□□□ -0.18
SNRPF-204ENST00000552085 RAB44Q7Z6P3 723 aaPredicted RBP13.92□□□□□ -0.18
SNRPF-204ENST00000552085 ZNF605Q86T29 641 aa13.92□□□□□ -0.18
SNRPF-204ENST00000552085 RALGPS2Q86X27 583 aaPredicted RBP13.92□□□□□ -0.18
SNRPF-204ENST00000552085 TEX2Q8IWB9 1127 aa13.92□□□□□ -0.18
SNRPF-204ENST00000552085 ZNF654Q8IZM8 581 aa13.92□□□□□ -0.18
SNRPF-204ENST00000552085 ABCA7Q8IZY2 2146 aa13.92□□□□□ -0.18
SNRPF-204ENST00000552085 ZSWIM3Q96MP5 696 aa13.92□□□□□ -0.18
SNRPF-204ENST00000552085 CEP89Q96ST8 783 aa13.92□□□□□ -0.18
SNRPF-204ENST00000552085 RIC8AQ9NPQ8 531 aa13.92□□□□□ -0.18
SNRPF-204ENST00000552085 ACACAQ13085 2346 aa13.92□□□□□ -0.18
SNRPF-204ENST00000552085 NCANO14594 1321 aa13.91□□□□□ -0.18
SNRPF-204ENST00000552085 TENM4Q6N022 2769 aa13.91□□□□□ -0.18
SNRPF-204ENST00000552085 PATE3B3GLJ2 98 aa13.91□□□□□ -0.18
SNRPF-204ENST00000552085 IRX4P78413 519 aa13.91□□□□□ -0.18
SNRPF-204ENST00000552085 KARSQ15046 597 aaKnown RBP13.91□□□□□ -0.18
SNRPF-204ENST00000552085 YAF2Q8IY57 180 aa13.91□□□□□ -0.18
SNRPF-204ENST00000552085 HASPINQ8TF76 798 aa13.91□□□□□ -0.18
SNRPF-204ENST00000552085 CORO1BQ9BR76 489 aa13.91□□□□□ -0.18
SNRPF-204ENST00000552085 EIF2AQ9BY44 585 aaKnown RBP13.91□□□□□ -0.18
SNRPF-204ENST00000552085 NIFKQ9BYG3 293 aaKnown RBP13.91□□□□□ -0.18
SNRPF-204ENST00000552085 TRPV4Q9HBA0 871 aa13.91□□□□□ -0.18
SNRPF-204ENST00000552085 CACNG4Q9UBN1 327 aa13.91□□□□□ -0.18
SNRPF-204ENST00000552085 SEPT9Q9UHD8 586 aaPredicted RBP13.91□□□□□ -0.18
SNRPF-204ENST00000552085 RAXQ9Y2V3 346 aa13.91□□□□□ -0.18
SNRPF-204ENST00000552085 GIT1Q9Y2X7 761 aa13.91□□□□□ -0.18
SNRPF-204ENST00000552085 HES2Q9Y543 173 aa13.91□□□□□ -0.18
SNRPF-204ENST00000552085 ASXL3Q9C0F0 2248 aa13.91□□□□□ -0.18
SNRPF-204ENST00000552085 CACNA1EQ15878 2313 aa13.91□□□□□ -0.18
SNRPF-204ENST00000552085 HEPACAM2A8MVW5 462 aa13.9□□□□□ -0.18
SNRPF-204ENST00000552085 HIP1O00291 1037 aa13.9□□□□□ -0.18
SNRPF-204ENST00000552085 DCLK1O15075 740 aa13.9□□□□□ -0.18
SNRPF-204ENST00000552085 CHADO15335 359 aa13.9□□□□□ -0.18
SNRPF-204ENST00000552085 SETQ01105 290 aaPredicted RBP13.9□□□□□ -0.18
SNRPF-204ENST00000552085 SPIRE1Q08AE8 756 aa13.9□□□□□ -0.18
SNRPF-204ENST00000552085 GRIK3Q13003 919 aa13.9□□□□□ -0.18
SNRPF-204ENST00000552085 AP3B2Q13367 1082 aa13.9□□□□□ -0.18
SNRPF-204ENST00000552085 HDAC1Q13547 482 aaPredicted RBP13.9□□□□□ -0.18
SNRPF-204ENST00000552085 SRGAP1Q7Z6B7 1085 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms