RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 ZNF746Q6NUN9 644 aaPredicted RBP11.48□□□□□ -0.57
SLC48A1-209ENST00000552003 CWC27Q6UX04 472 aaKnown RBP11.48□□□□□ -0.57
SLC48A1-209ENST00000552003 PLA2G4DQ86XP0 818 aa11.48□□□□□ -0.57
SLC48A1-209ENST00000552003 CHCHD4Q8N4Q1 142 aa11.48□□□□□ -0.57
SLC48A1-209ENST00000552003 CRYGNQ8WXF5 182 aa11.48□□□□□ -0.57
SLC48A1-209ENST00000552003 IRF7Q92985 503 aa11.48□□□□□ -0.57
SLC48A1-209ENST00000552003 LRIG1Q96JA1 1093 aa11.48□□□□□ -0.57
SLC48A1-209ENST00000552003 ASB16Q96NS5 453 aa11.48□□□□□ -0.57
SLC48A1-209ENST00000552003 DSCC1Q9BVC3 393 aa11.48□□□□□ -0.57
SLC48A1-209ENST00000552003 EIF2AQ9BY44 585 aaKnown RBP11.48□□□□□ -0.57
SLC48A1-209ENST00000552003 ANO3Q9BYT9 981 aa11.48□□□□□ -0.57
SLC48A1-209ENST00000552003 ADAM28Q9UKQ2 775 aa11.48□□□□□ -0.57
SLC48A1-209ENST00000552003 PCDHA10Q9Y5I2 948 aa11.48□□□□□ -0.57
SLC48A1-209ENST00000552003 PTPN13Q12923 2485 aa11.47□□□□□ -0.57
SLC48A1-209ENST00000552003 PI4KAP42356 2102 aa11.47□□□□□ -0.57
SLC48A1-209ENST00000552003 BCLAF3A2AJT9 711 aaKnown RBP11.47□□□□□ -0.57
SLC48A1-209ENST00000552003 MOSPD3O75425 235 aa11.47□□□□□ -0.57
SLC48A1-209ENST00000552003 PSAPP07602 524 aa11.47□□□□□ -0.57
SLC48A1-209ENST00000552003 SREBF1P36956 1147 aa11.47□□□□□ -0.57
SLC48A1-209ENST00000552003 FAM193AP78312 1265 aa11.47□□□□□ -0.57
SLC48A1-209ENST00000552003 CCINQ13939 588 aa11.47□□□□□ -0.57
SLC48A1-209ENST00000552003 NIPA1Q7RTP0 329 aa11.47□□□□□ -0.57
SLC48A1-209ENST00000552003 TICAM2Q86XR7 235 aa11.47□□□□□ -0.57
SLC48A1-209ENST00000552003 RHPN2Q8IUC4 686 aa11.47□□□□□ -0.57
SLC48A1-209ENST00000552003 HASPINQ8TF76 798 aa11.47□□□□□ -0.57
SLC48A1-209ENST00000552003 PIK3R5Q8WYR1 880 aa11.47□□□□□ -0.57
SLC48A1-209ENST00000552003 COLEC11Q9BWP8 271 aa11.47□□□□□ -0.57
SLC48A1-209ENST00000552003 ZFP14Q9HCL3 533 aa11.47□□□□□ -0.57
SLC48A1-209ENST00000552003 AVENQ9NQS1 362 aaPredicted RBP11.47□□□□□ -0.57
SLC48A1-209ENST00000552003 SEC63Q9UGP8 760 aaKnown RBP11.47□□□□□ -0.57
SLC48A1-209ENST00000552003 IPPQ9Y573 584 aa11.47□□□□□ -0.57
SLC48A1-209ENST00000552003 WDR27A2RRH5 827 aa11.46□□□□□ -0.57
SLC48A1-209ENST00000552003 SLC38A8A6NNN8 435 aa11.46□□□□□ -0.57
SLC48A1-209ENST00000552003 CAVIN2O95810 425 aa11.46□□□□□ -0.57
SLC48A1-209ENST00000552003 CCDC192P0DO97 292 aa11.46□□□□□ -0.57
SLC48A1-209ENST00000552003 PSMC3P17980 439 aa11.46□□□□□ -0.57
SLC48A1-209ENST00000552003 RXRAP19793 462 aa11.46□□□□□ -0.57
SLC48A1-209ENST00000552003 CREB5Q02930 508 aa11.46□□□□□ -0.57
SLC48A1-209ENST00000552003 PSMD5Q16401 504 aa11.46□□□□□ -0.57
SLC48A1-209ENST00000552003 WWC2Q6AWC2 1192 aa11.46□□□□□ -0.57
SLC48A1-209ENST00000552003 CATIPQ7Z7H3 387 aa11.46□□□□□ -0.57
SLC48A1-209ENST00000552003 TTC8Q8TAM2 541 aa11.46□□□□□ -0.57
SLC48A1-209ENST00000552003 FAM167AQ96KS9 214 aa11.46□□□□□ -0.57
SLC48A1-209ENST00000552003 NLRP4Q96MN2 994 aa11.46□□□□□ -0.57
SLC48A1-209ENST00000552003 TMEM9BQ9NQ34 198 aa11.46□□□□□ -0.57
SLC48A1-209ENST00000552003 SUCLA2Q9P2R7 463 aaPredicted RBP11.46□□□□□ -0.57
SLC48A1-209ENST00000552003 PIEZO2Q9H5I5 2752 aa11.46□□□□□ -0.58
SLC48A1-209ENST00000552003 THADAQ6YHU6 1953 aa11.46□□□□□ -0.58
SLC48A1-209ENST00000552003 CCDC163A0A0D9SF12 145 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 MEFVO15553 781 aaPredicted RBP11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 EDIL3O43854 480 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 ITGA4P13612 1032 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 OR1D2P34982 312 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 CLK2P49760 499 aaKnown RBP11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 MLLT6P55198 1093 aaPredicted RBP11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 IRX4P78413 519 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 C19orf57Q0VDD7 668 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 RAB33AQ14088 237 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 LRRC32Q14392 662 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 GSE1Q14687 1217 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 UVSSAQ2YD98 709 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 UAP1L1Q3KQV9 507 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 MTERF2Q49AM1 385 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 HEATR3Q7Z4Q2 680 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 PIP4P1Q86T03 277 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 ZNF410Q86VK4 478 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 SMAP1Q8IYB5 467 aaPredicted RBP11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 ZNF654Q8IZM8 581 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 CCDC82Q8N4S0 544 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 RILPL2Q969X0 211 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 LRRC3BQ96PB8 259 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 MAP3K14Q99558 947 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 ZNF577Q9BSK1 485 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 TTPALQ9BTX7 342 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 CXCL16Q9H2A7 254 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 NRBP2Q9NSY0 501 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 SNTG2Q9NY99 539 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 RAXQ9Y2V3 346 aa11.45□□□□□ -0.58
SLC48A1-209ENST00000552003 MYBPHLA2RUH7 354 aa11.44□□□□□ -0.58
SLC48A1-209ENST00000552003 EIF4E1BA6NMX2 242 aaKnown RBP11.44□□□□□ -0.58
SLC48A1-209ENST00000552003 SPECC1L-ADORA2AF8WAN1 911 aa11.44□□□□□ -0.58
SLC48A1-209ENST00000552003 ZNF263O14978 683 aa11.44□□□□□ -0.58
SLC48A1-209ENST00000552003 AKAP3O75969 853 aa11.44□□□□□ -0.58
SLC48A1-209ENST00000552003 SEC24BO95487 1268 aa11.44□□□□□ -0.58
SLC48A1-209ENST00000552003 CYP21A2P08686 494 aa11.44□□□□□ -0.58
SLC48A1-209ENST00000552003 GJA1P17302 382 aa11.44□□□□□ -0.58
SLC48A1-209ENST00000552003 MFAP1P55081 439 aaKnown RBP11.44□□□□□ -0.58
SLC48A1-209ENST00000552003 SIM1P81133 766 aaPredicted RBP11.44□□□□□ -0.58
SLC48A1-209ENST00000552003 CREMQ03060 361 aa11.44□□□□□ -0.58
SLC48A1-209ENST00000552003 PON2Q15165 354 aa11.44□□□□□ -0.58
SLC48A1-209ENST00000552003 DGKKQ5KSL6 1271 aa11.44□□□□□ -0.58
SLC48A1-209ENST00000552003 FAM171A1Q5VUB5 890 aa11.44□□□□□ -0.58
SLC48A1-209ENST00000552003 RAB44Q7Z6P3 723 aaPredicted RBP11.44□□□□□ -0.58
SLC48A1-209ENST00000552003 CEP57Q86XR8 500 aa11.44□□□□□ -0.58
SLC48A1-209ENST00000552003 RAB11FIP4Q86YS3 637 aa11.44□□□□□ -0.58
SLC48A1-209ENST00000552003 MFSD6LQ8IWD5 586 aa11.44□□□□□ -0.58
SLC48A1-209ENST00000552003 MDM1Q8TC05 714 aa11.44□□□□□ -0.58
SLC48A1-209ENST00000552003 LENG9Q96B70 501 aa11.44□□□□□ -0.58
SLC48A1-209ENST00000552003 NIFKQ9BYG3 293 aaKnown RBP11.44□□□□□ -0.58
SLC48A1-209ENST00000552003 INO80BQ9C086 356 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms