RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 PLEKHA5Q9HAU0 1116 aa17.68■□□□□ 0.42
CHMP1A-209ENST00000550872 AGPAT3Q9NRZ7 376 aa17.68■□□□□ 0.42
CHMP1A-209ENST00000550872 DNAJB4Q9UDY4 337 aa17.68■□□□□ 0.42
CHMP1A-209ENST00000550872 CPSF3Q9UKF6 684 aaKnown RBP17.68■□□□□ 0.42
CHMP1A-209ENST00000550872 PLAGL2Q9UPG8 496 aa17.68■□□□□ 0.42
CHMP1A-209ENST00000550872 MAPK8IP1Q9UQF2 711 aa17.68■□□□□ 0.42
CHMP1A-209ENST00000550872 VCANP13611 3396 aa17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 TDRD15B5MCY1 1934 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 SMIM28A0A1B0GU29 152 aa17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 GOLGA8IPA6NC78 632 aa17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 GOLGA8JA6NMD2 632 aa17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 NT5C1B-RDH14C9J2C7 533 aa17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 C5orf67F2Z3F1 127 aa17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 H3BNC9 293 aa17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 KIAA0391O15091 583 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 CLIC2O15247 247 aa17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 B4GALT3O60512 393 aa17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 ALDH2P05091 517 aa17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 GALTP07902 379 aa17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 PBX3P40426 434 aa17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 SNRPFP62306 86 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 ENOX2Q16206 610 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 XKR4Q5GH76 650 aa17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 ZNF658Q5TYW1 1059 aaPredicted RBP17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 COLGALT2Q8IYK4 626 aa17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 SMYD4Q8IYR2 804 aaPredicted RBP17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 GUF1Q8N442 669 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 KLHL23Q8NBE8 558 aa17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 GDPD5Q8WTR4 605 aa17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 FAM212AQ96EL1 285 aa17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 CDX2Q99626 313 aaPredicted RBP17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 FAM213AQ9BRX8 229 aa17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 TMEM175Q9BSA9 504 aa17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 GTPBP4Q9BZE4 634 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 SPG21Q9NZD8 308 aa17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 CGNQ9P2M7 1197 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 MAN1B1Q9UKM7 699 aa17.67■□□□□ 0.42
CHMP1A-209ENST00000550872 TTC26A0AVF1 554 aa17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 CARNS1A5YM72 827 aa17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 LACTBL1A8MY62 500 aa17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 TULP1O00294 542 aaPredicted RBP17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 BIN1O00499 593 aa17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 MEFVO15553 781 aaPredicted RBP17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 EXTL3O43909 919 aa17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 MCM4P33991 863 aa17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 OR1G1P47890 313 aa17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 SLC11A1P49279 550 aa17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 PPP2R3AQ06190 1150 aa17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 DSC1Q08554 894 aa17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 CRELD2Q6UXH1 353 aaPredicted RBP17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 GPD1LQ8N335 351 aa17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 ZSWIM2Q8NEG5 633 aa17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 GOLGA5Q8TBA6 731 aa17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 GPT2Q8TD30 523 aa17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 P2RX5Q93086 422 aa17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 PPP1R10Q96QC0 940 aaKnown RBP17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 GAS2L1Q99501 681 aaPredicted RBP17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 NUP62CLQ9H1M0 184 aa17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 KCTD10Q9H3F6 313 aa17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 ALG13Q9NP73 1137 aaKnown RBP17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 HSPBP1Q9NZL4 362 aa17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 CNTN3Q9P232 1028 aa17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 KIAA1468Q9P260 1216 aa17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 FAN1Q9Y2M0 1017 aa17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 RALGAPA2Q2PPJ7 1873 aa17.66■□□□□ 0.42
CHMP1A-209ENST00000550872 KIAA1671Q9BY89 1806 aa17.65■□□□□ 0.42
CHMP1A-209ENST00000550872 PDXKO00764 312 aa17.65■□□□□ 0.42
CHMP1A-209ENST00000550872 FGF18O76093 207 aa17.65■□□□□ 0.42
CHMP1A-209ENST00000550872 ITGB1P05556 798 aa17.65■□□□□ 0.42
CHMP1A-209ENST00000550872 KCNE1P15382 129 aa17.65■□□□□ 0.42
CHMP1A-209ENST00000550872 PPM1AP35813 382 aa17.65■□□□□ 0.42
CHMP1A-209ENST00000550872 CYP2J2P51589 502 aa17.65■□□□□ 0.42
CHMP1A-209ENST00000550872 SPAG1Q07617 926 aa17.65■□□□□ 0.42
CHMP1A-209ENST00000550872 TUSC3Q13454 348 aa17.65■□□□□ 0.42
CHMP1A-209ENST00000550872 CD302Q8IX05 232 aa17.65■□□□□ 0.42
CHMP1A-209ENST00000550872 SLC39A11Q8N1S5 342 aa17.65■□□□□ 0.42
CHMP1A-209ENST00000550872 MYLIPQ8WY64 445 aa17.65■□□□□ 0.42
CHMP1A-209ENST00000550872 ZMAT2Q96NC0 199 aaKnown RBP17.65■□□□□ 0.42
CHMP1A-209ENST00000550872 SLC38A7Q9NVC3 462 aa17.65■□□□□ 0.42
CHMP1A-209ENST00000550872 PRG3Q9Y2Y8 225 aaPredicted RBP17.65■□□□□ 0.42
CHMP1A-209ENST00000550872 EYSQ5T1H1 3165 aa17.65■□□□□ 0.42
CHMP1A-209ENST00000550872 NRP1O14786 923 aa17.64■□□□□ 0.41
CHMP1A-209ENST00000550872 GRM6O15303 877 aa17.64■□□□□ 0.41
CHMP1A-209ENST00000550872 CALUO43852 315 aaPredicted RBP17.64■□□□□ 0.41
CHMP1A-209ENST00000550872 MBD3O95983 291 aa17.64■□□□□ 0.41
CHMP1A-209ENST00000550872 ADRB2P07550 413 aa17.64■□□□□ 0.41
CHMP1A-209ENST00000550872 IGFBP4P22692 258 aa17.64■□□□□ 0.41
CHMP1A-209ENST00000550872 PRCPP42785 496 aa17.64■□□□□ 0.41
CHMP1A-209ENST00000550872 POU5F1Q01860 360 aaKnown RBP17.64■□□□□ 0.41
CHMP1A-209ENST00000550872 KRT17Q04695 432 aa17.64■□□□□ 0.41
CHMP1A-209ENST00000550872 NAB2Q15742 525 aa17.64■□□□□ 0.41
CHMP1A-209ENST00000550872 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.64■□□□□ 0.41
CHMP1A-209ENST00000550872 XXYLT1Q8NBI6 393 aa17.64■□□□□ 0.41
CHMP1A-209ENST00000550872 SPPL3Q8TCT6 385 aa17.64■□□□□ 0.41
CHMP1A-209ENST00000550872 KIF12Q96FN5 646 aa17.64■□□□□ 0.41
CHMP1A-209ENST00000550872 TMEM169Q96HH4 297 aa17.64■□□□□ 0.41
CHMP1A-209ENST00000550872 COLEC11Q9BWP8 271 aa17.64■□□□□ 0.41
CHMP1A-209ENST00000550872 KIAA1586Q9HCI6 787 aa17.64■□□□□ 0.41
CHMP1A-209ENST00000550872 MYO7AQ13402 2215 aa17.64■□□□□ 0.41
CHMP1A-209ENST00000550872 CASTOR2A6NHX0 329 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms