RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 PPP2R3AQ06190 1150 aa23.33■■□□□ 1.33
NEK3-202ENST00000550841 SLC10A6Q3KNW5 377 aa23.33■■□□□ 1.33
NEK3-202ENST00000550841 XKR4Q5GH76 650 aa23.33■■□□□ 1.33
NEK3-202ENST00000550841 CT47A1Q5JQC4 288 aaPredicted RBP23.33■■□□□ 1.33
NEK3-202ENST00000550841 SPOUT1Q5T280 376 aaKnown RBP23.33■■□□□ 1.33
NEK3-202ENST00000550841 TMEM192Q8IY95 271 aa23.33■■□□□ 1.33
NEK3-202ENST00000550841 TIFAQ96CG3 184 aa23.33■■□□□ 1.33
NEK3-202ENST00000550841 SAAL1Q96ER3 474 aa23.33■■□□□ 1.33
NEK3-202ENST00000550841 SNX27Q96L92 541 aa23.33■■□□□ 1.33
NEK3-202ENST00000550841 SAMD11Q96NU1 681 aa23.33■■□□□ 1.33
NEK3-202ENST00000550841 YBX2Q9Y2T7 364 aaKnown RBP23.33■■□□□ 1.33
NEK3-202ENST00000550841 IL18RAPO95256 599 aa23.32■■□□□ 1.32
NEK3-202ENST00000550841 CA3P07451 260 aa23.32■■□□□ 1.32
NEK3-202ENST00000550841 ADRB2P07550 413 aa23.32■■□□□ 1.32
NEK3-202ENST00000550841 MYOGP15173 224 aa23.32■■□□□ 1.32
NEK3-202ENST00000550841 KCNE1P15382 129 aa23.32■■□□□ 1.32
NEK3-202ENST00000550841 TNFSF9P41273 254 aa23.32■■□□□ 1.32
NEK3-202ENST00000550841 GRIK3Q13003 919 aa23.32■■□□□ 1.32
NEK3-202ENST00000550841 SURF1Q15526 300 aa23.32■■□□□ 1.32
NEK3-202ENST00000550841 FOXR2Q6PJQ5 311 aa23.32■■□□□ 1.32
NEK3-202ENST00000550841 CRELD2Q6UXH1 353 aaPredicted RBP23.32■■□□□ 1.32
NEK3-202ENST00000550841 NOC3LQ8WTT2 800 aaKnown RBP23.32■■□□□ 1.32
NEK3-202ENST00000550841 FBXL18Q96ME1 805 aa23.32■■□□□ 1.32
NEK3-202ENST00000550841 ZFP42Q96MM3 310 aa23.32■■□□□ 1.32
NEK3-202ENST00000550841 NKX2-4Q9H2Z4 354 aa23.32■■□□□ 1.32
NEK3-202ENST00000550841 ASB7Q9H672 318 aa23.32■■□□□ 1.32
NEK3-202ENST00000550841 SLC38A7Q9NVC3 462 aa23.32■■□□□ 1.32
NEK3-202ENST00000550841 TBC1D13Q9NVG8 400 aa23.32■■□□□ 1.32
NEK3-202ENST00000550841 CNTN3Q9P232 1028 aa23.32■■□□□ 1.32
NEK3-202ENST00000550841 FRMD4BQ9Y2L6 1034 aa23.32■■□□□ 1.32
NEK3-202ENST00000550841 TTC26A0AVF1 554 aa23.31■■□□□ 1.32
NEK3-202ENST00000550841 LINC01553A4QN01 128 aa23.31■■□□□ 1.32
NEK3-202ENST00000550841 GOLGA8IPA6NC78 632 aa23.31■■□□□ 1.32
NEK3-202ENST00000550841 GOLGA8JA6NMD2 632 aa23.31■■□□□ 1.32
NEK3-202ENST00000550841 POMCP01189 267 aa23.31■■□□□ 1.32
NEK3-202ENST00000550841 CXCL8P10145 99 aa23.31■■□□□ 1.32
NEK3-202ENST00000550841 CD44P16070 742 aaKnown RBP23.31■■□□□ 1.32
NEK3-202ENST00000550841 SCNN1GP51170 649 aa23.31■■□□□ 1.32
NEK3-202ENST00000550841 ADAM9Q13443 819 aa23.31■■□□□ 1.32
NEK3-202ENST00000550841 ENOX2Q16206 610 aaKnown RBP23.31■■□□□ 1.32
NEK3-202ENST00000550841 ZBTB41Q5SVQ8 909 aa23.31■■□□□ 1.32
NEK3-202ENST00000550841 KLHL10Q6JEL2 608 aa23.31■■□□□ 1.32
NEK3-202ENST00000550841 GSTCDQ8NEC7 633 aa23.31■■□□□ 1.32
NEK3-202ENST00000550841 NELFBQ8WX92 580 aa23.31■■□□□ 1.32
NEK3-202ENST00000550841 CLP1Q92989 425 aaKnown RBP23.31■■□□□ 1.32
NEK3-202ENST00000550841 FAM212AQ96EL1 285 aa23.31■■□□□ 1.32
NEK3-202ENST00000550841 TTYH1Q9H313 450 aaPredicted RBP23.31■■□□□ 1.32
NEK3-202ENST00000550841 MIOSQ9NXC5 875 aa23.31■■□□□ 1.32
NEK3-202ENST00000550841 MRPL42Q9Y6G3 142 aaKnown RBP23.31■■□□□ 1.32
NEK3-202ENST00000550841 CITO14578 2027 aa23.31■■□□□ 1.32
NEK3-202ENST00000550841 COL4A6Q14031 1691 aa23.3■■□□□ 1.32
NEK3-202ENST00000550841 TMEM265A0A087WTH1 108 aa23.3■■□□□ 1.32
NEK3-202ENST00000550841 SMIM28A0A1B0GU29 152 aa23.3■■□□□ 1.32
NEK3-202ENST00000550841 LCHNA4D1U4 455 aa23.3■■□□□ 1.32
NEK3-202ENST00000550841 LACTBL1A8MY62 500 aa23.3■■□□□ 1.32
NEK3-202ENST00000550841 CETN3O15182 167 aa23.3■■□□□ 1.32
NEK3-202ENST00000550841 XPOTO43592 962 aaKnown RBP23.3■■□□□ 1.32
NEK3-202ENST00000550841 LAG3P18627 525 aa23.3■■□□□ 1.32
NEK3-202ENST00000550841 NR2F2P24468 414 aa23.3■■□□□ 1.32
NEK3-202ENST00000550841 FKBP3Q00688 224 aaKnown RBP23.3■■□□□ 1.32
NEK3-202ENST00000550841 PAK1Q13153 545 aa23.3■■□□□ 1.32
NEK3-202ENST00000550841 SNRNP35Q16560 246 aaKnown RBP23.3■■□□□ 1.32
NEK3-202ENST00000550841 ZCWPW2Q504Y3 356 aa23.3■■□□□ 1.32
NEK3-202ENST00000550841 PPP2R2DQ66LE6 453 aa23.3■■□□□ 1.32
NEK3-202ENST00000550841 ANKRD40Q6AI12 368 aa23.3■■□□□ 1.32
NEK3-202ENST00000550841 LRRC55Q6ZSA7 311 aa23.3■■□□□ 1.32
NEK3-202ENST00000550841 BRSK2Q8IWQ3 736 aa23.3■■□□□ 1.32
NEK3-202ENST00000550841 MAFAQ8NHW3 353 aaPredicted RBP23.3■■□□□ 1.32
NEK3-202ENST00000550841 MYLIPQ8WY64 445 aa23.3■■□□□ 1.32
NEK3-202ENST00000550841 TGS1Q96RS0 853 aaKnown RBP23.3■■□□□ 1.32
NEK3-202ENST00000550841 CWH43Q9H720 699 aa23.3■■□□□ 1.32
NEK3-202ENST00000550841 ANO10Q9NW15 660 aa23.3■■□□□ 1.32
NEK3-202ENST00000550841 RBAKQ9NYW8 714 aaPredicted RBP23.3■■□□□ 1.32
NEK3-202ENST00000550841 DERAQ9Y315 318 aa23.3■■□□□ 1.32
NEK3-202ENST00000550841 PCDHB12Q9Y5F1 795 aa23.3■■□□□ 1.32
NEK3-202ENST00000550841 ALDH2P05091 517 aa23.29■■□□□ 1.32
NEK3-202ENST00000550841 ALDH7A1P49419 539 aaKnown RBP23.29■■□□□ 1.32
NEK3-202ENST00000550841 AFF1P51825 1210 aaKnown RBP23.29■■□□□ 1.32
NEK3-202ENST00000550841 NT5DC4Q86YG4 428 aa23.29■■□□□ 1.32
NEK3-202ENST00000550841 RDH13Q8NBN7 331 aa23.29■■□□□ 1.32
NEK3-202ENST00000550841 TMEM175Q9BSA9 504 aa23.29■■□□□ 1.32
NEK3-202ENST00000550841 NRDE2Q9H7Z3 1164 aa23.29■■□□□ 1.32
NEK3-202ENST00000550841 RWDD2AQ9UIY3 292 aa23.29■■□□□ 1.32
NEK3-202ENST00000550841 PTGESO14684 152 aa23.28■■□□□ 1.32
NEK3-202ENST00000550841 MAPK13O15264 365 aa23.28■■□□□ 1.32
NEK3-202ENST00000550841 FGFR1OPO95684 399 aaKnown RBP23.28■■□□□ 1.32
NEK3-202ENST00000550841 RB1P06400 928 aa23.28■■□□□ 1.32
NEK3-202ENST00000550841 BMPR1AP36894 532 aa23.28■■□□□ 1.32
NEK3-202ENST00000550841 TAP1Q03518 808 aa23.28■■□□□ 1.32
NEK3-202ENST00000550841 TUSC3Q13454 348 aa23.28■■□□□ 1.32
NEK3-202ENST00000550841 CEP135Q66GS9 1140 aa23.28■■□□□ 1.32
NEK3-202ENST00000550841 CBWD2Q8IUF1 395 aa23.28■■□□□ 1.32
NEK3-202ENST00000550841 CACTINQ8WUQ7 758 aaKnown RBP23.28■■□□□ 1.32
NEK3-202ENST00000550841 KIF12Q96FN5 646 aa23.28■■□□□ 1.32
NEK3-202ENST00000550841 PPP1R10Q96QC0 940 aaKnown RBP23.28■■□□□ 1.32
NEK3-202ENST00000550841 PLVAPQ9BX97 442 aa23.28■■□□□ 1.32
NEK3-202ENST00000550841 COL25A1Q9BXS0 654 aaPredicted RBP23.28■■□□□ 1.32
NEK3-202ENST00000550841 CTNND2Q9UQB3 1225 aa23.28■■□□□ 1.32
NEK3-202ENST00000550841 GBF1Q92538 1859 aa23.28■■□□□ 1.32
NEK3-202ENST00000550841 FOSL2P15408 326 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms