RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 GSDMAQ96QA5 445 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 CXCL16Q9H2A7 254 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 IKZF4Q9H2S9 585 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 CERS4Q9HA82 394 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 MARCH5Q9NX47 278 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 TBC1D7Q9P0N9 293 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 DNAJB4Q9UDY4 337 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 INPP5FQ9Y2H2 1132 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 SMIM28A0A1B0GU29 152 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 RFXAPO00287 272 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 GRM6O15303 877 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 FGF18O76093 207 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 POMCP01189 267 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 THP07101 528 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 FOSL2P15408 326 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 IBSPP21815 317 aaPredicted RBP12.99□□□□□ -0.33
PFDN5-208ENST00000549995 SLC11A1P49279 550 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 ZBTB6Q15916 424 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 ENOX2Q16206 610 aaKnown RBP12.99□□□□□ -0.33
PFDN5-208ENST00000549995 NFIL3Q16649 462 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 ZBTB33Q86T24 672 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 CD302Q8IX05 232 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 GPR65Q8IYL9 337 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 IGSF21Q96ID5 467 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 UROC1Q96N76 676 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 RPS6KC1Q96S38 1066 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 TCHPQ9BT92 498 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 MSTO1Q9BUK6 570 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 APOL6Q9BWW8 343 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 GTPBP4Q9BZE4 634 aaKnown RBP12.99□□□□□ -0.33
PFDN5-208ENST00000549995 GBP3Q9H0R5 595 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 KCTD10Q9H3F6 313 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 EXOC1Q9NV70 894 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 SPG21Q9NZD8 308 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 PARP2Q9UGN5 583 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 AGO2Q9UKV8 859 aaKnown RBP12.99□□□□□ -0.33
PFDN5-208ENST00000549995 MTUS1Q9ULD2 1270 aa12.99□□□□□ -0.33
PFDN5-208ENST00000549995 NRP1O14786 923 aa12.98□□□□□ -0.33
PFDN5-208ENST00000549995 KINO60870 393 aaKnown RBP12.98□□□□□ -0.33
PFDN5-208ENST00000549995 ZC3H11AO75152 810 aaKnown RBP eCLIP12.98□□□□□ -0.33
PFDN5-208ENST00000549995 LDHAP00338 332 aaKnown RBP12.98□□□□□ -0.33
PFDN5-208ENST00000549995 CYP3A5P20815 502 aa12.98□□□□□ -0.33
PFDN5-208ENST00000549995 DNAJB1P25685 340 aa12.98□□□□□ -0.33
PFDN5-208ENST00000549995 TNFSF9P41273 254 aa12.98□□□□□ -0.33
PFDN5-208ENST00000549995 YARSP54577 528 aaKnown RBP12.98□□□□□ -0.33
PFDN5-208ENST00000549995 MCCD1P59942 119 aaPredicted RBP12.98□□□□□ -0.33
PFDN5-208ENST00000549995 RNASELQ05823 741 aaKnown RBP12.98□□□□□ -0.33
PFDN5-208ENST00000549995 PNOCQ13519 176 aa12.98□□□□□ -0.33
PFDN5-208ENST00000549995 PTPROQ16827 1216 aa12.98□□□□□ -0.33
PFDN5-208ENST00000549995 KNOP1Q1ED39 458 aaKnown RBP12.98□□□□□ -0.33
PFDN5-208ENST00000549995 TIGD5Q53EQ6 642 aa12.98□□□□□ -0.33
PFDN5-208ENST00000549995 ZBTB41Q5SVQ8 909 aa12.98□□□□□ -0.33
PFDN5-208ENST00000549995 PDE12Q6L8Q7 609 aaKnown RBP12.98□□□□□ -0.33
PFDN5-208ENST00000549995 DDX53Q86TM3 631 aaKnown RBP12.98□□□□□ -0.33
PFDN5-208ENST00000549995 TMEM173Q86WV6 379 aaPredicted RBP12.98□□□□□ -0.33
PFDN5-208ENST00000549995 SLC9A9Q8IVB4 645 aa12.98□□□□□ -0.33
PFDN5-208ENST00000549995 THNSL1Q8IYQ7 743 aa12.98□□□□□ -0.33
PFDN5-208ENST00000549995 GUF1Q8N442 669 aaKnown RBP12.98□□□□□ -0.33
PFDN5-208ENST00000549995 BCL7CQ8WUZ0 217 aaPredicted RBP12.98□□□□□ -0.33
PFDN5-208ENST00000549995 ZMAT2Q96NC0 199 aaKnown RBP12.98□□□□□ -0.33
PFDN5-208ENST00000549995 VN1R3Q9BXE9 311 aa12.98□□□□□ -0.33
PFDN5-208ENST00000549995 ASB7Q9H672 318 aa12.98□□□□□ -0.33
PFDN5-208ENST00000549995 SLC39A2Q9NP94 309 aa12.98□□□□□ -0.33
PFDN5-208ENST00000549995 LMBRD1Q9NUN5 540 aa12.98□□□□□ -0.33
PFDN5-208ENST00000549995 KLK14Q9P0G3 267 aa12.98□□□□□ -0.33
PFDN5-208ENST00000549995 GDAQ9Y2T3 454 aa12.98□□□□□ -0.33
PFDN5-208ENST00000549995 DERAQ9Y315 318 aa12.98□□□□□ -0.33
PFDN5-208ENST00000549995 IRAK3Q9Y616 596 aa12.98□□□□□ -0.33
PFDN5-208ENST00000549995 EXTL3O43909 919 aa12.97□□□□□ -0.33
PFDN5-208ENST00000549995 CXCL8P10145 99 aa12.97□□□□□ -0.33
PFDN5-208ENST00000549995 LRPAP1P30533 357 aa12.97□□□□□ -0.33
PFDN5-208ENST00000549995 ALDH7A1P49419 539 aaKnown RBP12.97□□□□□ -0.33
PFDN5-208ENST00000549995 MAPK8IP2Q13387 824 aaPredicted RBP12.97□□□□□ -0.33
PFDN5-208ENST00000549995 MYBPC2Q14324 1141 aa12.97□□□□□ -0.33
PFDN5-208ENST00000549995 ZCWPW2Q504Y3 356 aa12.97□□□□□ -0.33
PFDN5-208ENST00000549995 NT5DC4Q86YG4 428 aa12.97□□□□□ -0.33
PFDN5-208ENST00000549995 BRSK2Q8IWQ3 736 aa12.97□□□□□ -0.33
PFDN5-208ENST00000549995 GOLGA5Q8TBA6 731 aa12.97□□□□□ -0.33
PFDN5-208ENST00000549995 POF1BQ8WVV4 589 aa12.97□□□□□ -0.33
PFDN5-208ENST00000549995 POMGNT1Q8WZA1 660 aa12.97□□□□□ -0.33
PFDN5-208ENST00000549995 CCDC47Q96A33 483 aaKnown RBP12.97□□□□□ -0.33
PFDN5-208ENST00000549995 GBP4Q96PP9 640 aa12.97□□□□□ -0.33
PFDN5-208ENST00000549995 CBWD1Q9BRT8 395 aa12.97□□□□□ -0.33
PFDN5-208ENST00000549995 ZBP1Q9H171 429 aa12.97□□□□□ -0.33
PFDN5-208ENST00000549995 AGPAT3Q9NRZ7 376 aa12.97□□□□□ -0.33
PFDN5-208ENST00000549995 SLC38A7Q9NVC3 462 aa12.97□□□□□ -0.33
PFDN5-208ENST00000549995 DMAC2Q9NW81 257 aa12.97□□□□□ -0.33
PFDN5-208ENST00000549995 RMND1Q9NWS8 449 aa12.97□□□□□ -0.33
PFDN5-208ENST00000549995 HOOK1Q9UJC3 728 aaKnown RBP12.97□□□□□ -0.33
PFDN5-208ENST00000549995 TRAF3IP3Q9Y228 551 aa12.97□□□□□ -0.33
PFDN5-208ENST00000549995 C2CD2Q9Y426 696 aa12.97□□□□□ -0.33
PFDN5-208ENST00000549995 COL6A3P12111 3177 aa12.96□□□□□ -0.33
PFDN5-208ENST00000549995 EYSQ5T1H1 3165 aa12.96□□□□□ -0.33
PFDN5-208ENST00000549995 PDXKO00764 312 aa12.96□□□□□ -0.33
PFDN5-208ENST00000549995 PRPF40AO75400 957 aaKnown RBP12.96□□□□□ -0.33
PFDN5-208ENST00000549995 KIF20AO95235 890 aa12.96□□□□□ -0.33
PFDN5-208ENST00000549995 ALDH2P05091 517 aa12.96□□□□□ -0.33
PFDN5-208ENST00000549995 HARSP12081 509 aaKnown RBP12.96□□□□□ -0.33
PFDN5-208ENST00000549995 PBX3P40426 434 aa12.96□□□□□ -0.33
PFDN5-208ENST00000549995 PPP2R3AQ06190 1150 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms