RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 CAGE1Q8TC20 777 aa5.92□□□□□ -1.46
CCDC38-208ENST00000549876 FUBP1Q96AE4 644 aaKnown RBP5.92□□□□□ -1.46
CCDC38-208ENST00000549876 EAF2Q96CJ1 260 aaPredicted RBP5.92□□□□□ -1.46
CCDC38-208ENST00000549876 RNF181Q9P0P0 153 aa5.92□□□□□ -1.46
CCDC38-208ENST00000549876 TLK1Q9UKI8 766 aa5.92□□□□□ -1.46
CCDC38-208ENST00000549876 KRTAP29-1A8MX34 341 aaPredicted RBP5.91□□□□□ -1.46
CCDC38-208ENST00000549876 CDKL5O76039 1030 aa5.91□□□□□ -1.46
CCDC38-208ENST00000549876 IGLV2-14P01704 120 aa5.91□□□□□ -1.46
CCDC38-208ENST00000549876 ELANEP08246 267 aa5.91□□□□□ -1.46
CCDC38-208ENST00000549876 CTSSP25774 331 aa5.91□□□□□ -1.46
CCDC38-208ENST00000549876 CHN2P52757 468 aa5.91□□□□□ -1.46
CCDC38-208ENST00000549876 NHLH1Q02575 133 aa5.91□□□□□ -1.46
CCDC38-208ENST00000549876 PRAMEF14Q5SWL7 426 aa5.91□□□□□ -1.46
CCDC38-208ENST00000549876 GIMAP6Q6P9H5 292 aa5.91□□□□□ -1.46
CCDC38-208ENST00000549876 PDZD4Q76G19 769 aaPredicted RBP5.91□□□□□ -1.46
CCDC38-208ENST00000549876 GPR149Q86SP6 731 aa5.91□□□□□ -1.46
CCDC38-208ENST00000549876 RHOT2Q8IXI1 618 aa5.91□□□□□ -1.46
CCDC38-208ENST00000549876 SLC44A3Q8N4M1 653 aa5.91□□□□□ -1.46
CCDC38-208ENST00000549876 TTC1Q99614 292 aa5.91□□□□□ -1.46
CCDC38-208ENST00000549876 SPATA5L1Q9BVQ7 753 aa5.91□□□□□ -1.46
CCDC38-208ENST00000549876 TESQ9UGI8 421 aaKnown RBP5.91□□□□□ -1.46
CCDC38-208ENST00000549876 EDARQ9UNE0 448 aa5.91□□□□□ -1.46
CCDC38-208ENST00000549876 PJA2O43164 708 aa5.9□□□□□ -1.46
CCDC38-208ENST00000549876 ULK1O75385 1050 aa5.9□□□□□ -1.46
CCDC38-208ENST00000549876 MATN4O95460 622 aa5.9□□□□□ -1.46
CCDC38-208ENST00000549876 FOSP01100 380 aaPredicted RBP5.9□□□□□ -1.46
CCDC38-208ENST00000549876 FDXRP22570 491 aa5.9□□□□□ -1.46
CCDC38-208ENST00000549876 CRHR1P34998 444 aa5.9□□□□□ -1.46
CCDC38-208ENST00000549876 FLT3LGP49771 235 aa5.9□□□□□ -1.46
CCDC38-208ENST00000549876 FOXF2Q12947 444 aa5.9□□□□□ -1.46
CCDC38-208ENST00000549876 STRN3Q13033 797 aa5.9□□□□□ -1.46
CCDC38-208ENST00000549876 ZNF169Q14929 603 aaPredicted RBP5.9□□□□□ -1.46
CCDC38-208ENST00000549876 FSCN1Q16658 493 aaKnown RBP5.9□□□□□ -1.46
CCDC38-208ENST00000549876 HDGFL2Q7Z4V5 671 aaPredicted RBP5.9□□□□□ -1.46
CCDC38-208ENST00000549876 CMIPQ8IY22 773 aa5.9□□□□□ -1.46
CCDC38-208ENST00000549876 SLC35B2Q8TB61 432 aa5.9□□□□□ -1.46
CCDC38-208ENST00000549876 ATP11BQ9Y2G3 1177 aa5.9□□□□□ -1.46
CCDC38-208ENST00000549876 C1QL1O75973 258 aa5.89□□□□□ -1.47
CCDC38-208ENST00000549876 ERBB2P04626 1255 aa5.89□□□□□ -1.47
CCDC38-208ENST00000549876 HSD3B2P26439 372 aa5.89□□□□□ -1.47
CCDC38-208ENST00000549876 SESN3P58005 492 aa5.89□□□□□ -1.47
CCDC38-208ENST00000549876 SIM1P81133 766 aaPredicted RBP5.89□□□□□ -1.47
CCDC38-208ENST00000549876 MXRA7P84157 204 aa5.89□□□□□ -1.47
CCDC38-208ENST00000549876 UGT8Q16880 541 aa5.89□□□□□ -1.47
CCDC38-208ENST00000549876 B3GNTL1Q67FW5 361 aaPredicted RBP5.89□□□□□ -1.47
CCDC38-208ENST00000549876 TMEM132CQ8N3T6 1108 aa5.89□□□□□ -1.47
CCDC38-208ENST00000549876 OR56A1Q8NGH5 318 aa5.89□□□□□ -1.47
CCDC38-208ENST00000549876 ANKS1AQ92625 1134 aa5.89□□□□□ -1.47
CCDC38-208ENST00000549876 Q96MF0 132 aa5.89□□□□□ -1.47
CCDC38-208ENST00000549876 DUSP26Q9BV47 211 aa5.89□□□□□ -1.47
CCDC38-208ENST00000549876 SEMA4GQ9NTN9 838 aa5.89□□□□□ -1.47
CCDC38-208ENST00000549876 KLHL11Q9NVR0 708 aa5.89□□□□□ -1.47
CCDC38-208ENST00000549876 USP35Q9P2H5 1018 aa5.89□□□□□ -1.47
CCDC38-208ENST00000549876 ARHGEF17Q96PE2 2063 aaPredicted RBP5.89□□□□□ -1.47
CCDC38-208ENST00000549876 RBMXL2O75526 392 aaKnown RBP5.88□□□□□ -1.47
CCDC38-208ENST00000549876 ENPP1P22413 925 aa5.88□□□□□ -1.47
CCDC38-208ENST00000549876 MASP1P48740 699 aa5.88□□□□□ -1.47
CCDC38-208ENST00000549876 RARRES1P49788 294 aa5.88□□□□□ -1.47
CCDC38-208ENST00000549876 CLRN1P58418 232 aa5.88□□□□□ -1.47
CCDC38-208ENST00000549876 FAM47AQ5JRC9 791 aa5.88□□□□□ -1.47
CCDC38-208ENST00000549876 ATXN7L2Q5T6C5 722 aaPredicted RBP5.88□□□□□ -1.47
CCDC38-208ENST00000549876 MAPKAPK5Q8IW41 473 aa5.88□□□□□ -1.47
CCDC38-208ENST00000549876 ZNF480Q8WV37 535 aa5.88□□□□□ -1.47
CCDC38-208ENST00000549876 ACAP3Q96P50 834 aa5.88□□□□□ -1.47
CCDC38-208ENST00000549876 CAAP1Q9H8G2 361 aa5.88□□□□□ -1.47
CCDC38-208ENST00000549876 VTA1Q9NP79 307 aa5.88□□□□□ -1.47
CCDC38-208ENST00000549876 COL3A1P02461 1466 aaPredicted RBP5.88□□□□□ -1.47
CCDC38-208ENST00000549876 CXorf49A8MYA2 514 aaPredicted RBP5.87□□□□□ -1.47
CCDC38-208ENST00000549876 MGST3O14880 152 aa5.87□□□□□ -1.47
CCDC38-208ENST00000549876 ADCY6O43306 1168 aa5.87□□□□□ -1.47
CCDC38-208ENST00000549876 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.87□□□□□ -1.47
CCDC38-208ENST00000549876 SDE2Q6IQ49 451 aa5.87□□□□□ -1.47
CCDC38-208ENST00000549876 Q6ZNX1 250 aa5.87□□□□□ -1.47
CCDC38-208ENST00000549876 SRRM1Q8IYB3 904 aaKnown RBP5.87□□□□□ -1.47
CCDC38-208ENST00000549876 AFAP1L2Q8N4X5 818 aa5.87□□□□□ -1.47
CCDC38-208ENST00000549876 LMBR1Q8WVP7 490 aa5.87□□□□□ -1.47
CCDC38-208ENST00000549876 TMEM74BQ9NUR3 256 aa5.87□□□□□ -1.47
CCDC38-208ENST00000549876 FOXJ2Q9P0K8 574 aa5.87□□□□□ -1.47
CCDC38-208ENST00000549876 DPP7Q9UHL4 492 aa5.87□□□□□ -1.47
CCDC38-208ENST00000549876 APOBEC2Q9Y235 224 aaKnown RBP5.87□□□□□ -1.47
CCDC38-208ENST00000549876 PNPLA7Q6ZV29 1317 aa5.87□□□□□ -1.47
CCDC38-208ENST00000549876 ATRNL1Q5VV63 1379 aa5.86□□□□□ -1.47
CCDC38-208ENST00000549876 RPTORQ8N122 1335 aa5.86□□□□□ -1.47
CCDC38-208ENST00000549876 EYA4O95677 639 aa5.86□□□□□ -1.47
CCDC38-208ENST00000549876 ITGB6P18564 788 aa5.86□□□□□ -1.47
CCDC38-208ENST00000549876 CANXP27824 592 aaKnown RBP5.86□□□□□ -1.47
CCDC38-208ENST00000549876 KRTAP10-9P60411 292 aa5.86□□□□□ -1.47
CCDC38-208ENST00000549876 CDK17Q00537 523 aa5.86□□□□□ -1.47
CCDC38-208ENST00000549876 TAF7LQ5H9L4 462 aa5.86□□□□□ -1.47
CCDC38-208ENST00000549876 SP5Q6BEB4 398 aaPredicted RBP5.86□□□□□ -1.47
CCDC38-208ENST00000549876 TSPEARQ8WU66 669 aa5.86□□□□□ -1.47
CCDC38-208ENST00000549876 RAX2Q96IS3 184 aa5.86□□□□□ -1.47
CCDC38-208ENST00000549876 ORAI2Q96SN7 254 aa5.86□□□□□ -1.47
CCDC38-208ENST00000549876 ALOXE3Q9BYJ1 711 aa5.86□□□□□ -1.47
CCDC38-208ENST00000549876 MYADML2A6NDP7 307 aa5.85□□□□□ -1.47
CCDC38-208ENST00000549876 WNT10BO00744 389 aa5.85□□□□□ -1.47
CCDC38-208ENST00000549876 BRINP1O60477 761 aa5.85□□□□□ -1.47
CCDC38-208ENST00000549876 SNRPA1P09661 255 aaKnown RBP5.85□□□□□ -1.47
CCDC38-208ENST00000549876 SOX5P35711 763 aa5.85□□□□□ -1.47
CCDC38-208ENST00000549876 CACNA2D1P54289 1103 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms