RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 RAB27AP51159 221 aa17.3■□□□□ 0.36
CHMP1A-206ENST00000549139 MAPK7Q13164 816 aa17.3■□□□□ 0.36
CHMP1A-206ENST00000549139 MCM6Q14566 821 aa17.3■□□□□ 0.36
CHMP1A-206ENST00000549139 AMHR2Q16671 573 aa17.3■□□□□ 0.36
CHMP1A-206ENST00000549139 RRAGBQ5VZM2 374 aa17.3■□□□□ 0.36
CHMP1A-206ENST00000549139 PPP4R3CPQ6ZMV5 832 aa17.3■□□□□ 0.36
CHMP1A-206ENST00000549139 C15orf39Q6ZRI6 1047 aa17.3■□□□□ 0.36
CHMP1A-206ENST00000549139 DAW1Q8N136 415 aa17.3■□□□□ 0.36
CHMP1A-206ENST00000549139 DEPTORQ8TB45 409 aa17.3■□□□□ 0.36
CHMP1A-206ENST00000549139 LARP4BQ92615 738 aaKnown RBP17.3■□□□□ 0.36
CHMP1A-206ENST00000549139 LPPQ93052 612 aa17.3■□□□□ 0.36
CHMP1A-206ENST00000549139 PRIMPOLQ96LW4 560 aa17.3■□□□□ 0.36
CHMP1A-206ENST00000549139 NTPCRQ9BSD7 190 aaKnown RBP17.3■□□□□ 0.36
CHMP1A-206ENST00000549139 FAM105AQ9NUU6 356 aa17.3■□□□□ 0.36
CHMP1A-206ENST00000549139 PRMT7Q9NVM4 692 aaPredicted RBP17.3■□□□□ 0.36
CHMP1A-206ENST00000549139 DNAJB4Q9UDY4 337 aa17.3■□□□□ 0.36
CHMP1A-206ENST00000549139 STK17AQ9UEE5 414 aa17.3■□□□□ 0.36
CHMP1A-206ENST00000549139 OFD1O75665 1012 aa17.29■□□□□ 0.36
CHMP1A-206ENST00000549139 CNPP09543 421 aaKnown RBP17.29■□□□□ 0.36
CHMP1A-206ENST00000549139 SLC11A1P49279 550 aa17.29■□□□□ 0.36
CHMP1A-206ENST00000549139 EFNA5P52803 228 aa17.29■□□□□ 0.36
CHMP1A-206ENST00000549139 PEX3P56589 373 aa17.29■□□□□ 0.36
CHMP1A-206ENST00000549139 ARSHQ5FYA8 562 aa17.29■□□□□ 0.36
CHMP1A-206ENST00000549139 NOTUMQ6P988 496 aa17.29■□□□□ 0.36
CHMP1A-206ENST00000549139 CCDC73Q6ZRK6 1079 aa17.29■□□□□ 0.36
CHMP1A-206ENST00000549139 DGLUCYQ7Z3D6 616 aa17.29■□□□□ 0.36
CHMP1A-206ENST00000549139 CMASQ8NFW8 434 aaPredicted RBP17.29■□□□□ 0.36
CHMP1A-206ENST00000549139 CCDC51Q96ER9 411 aa17.29■□□□□ 0.36
CHMP1A-206ENST00000549139 ODF2LQ9ULJ1 636 aa17.29■□□□□ 0.36
CHMP1A-206ENST00000549139 R4GN57 208 aa17.29■□□□□ 0.36
CHMP1A-206ENST00000549139 TDRD15B5MCY1 1934 aaKnown RBP17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 A0A1B0GUA9 196 aa17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 ARF4P18085 180 aaPredicted RBP17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 NPTX2P47972 431 aa17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 KRT85P78386 507 aa17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 NUCB2P80303 420 aa17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 DMP1Q13316 513 aaPredicted RBP17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 DHX8Q14562 1220 aaKnown RBP17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 MAPK6Q16659 721 aa17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 NOMO2Q5JPE7 1267 aa17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 UBXN11Q5T124 520 aa17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 AXDND1Q5T1B0 1012 aaPredicted RBP17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 MRPL10Q7Z7H8 261 aaKnown RBP17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 GPBP1Q86WP2 473 aa17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 KIAA2013Q8IYS2 634 aa17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 CNNM3Q8NE01 707 aa17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 RSAD2Q8WXG1 361 aa17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 RHOBTB2Q9BYZ6 727 aa17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 CCDC113Q9H0I3 377 aa17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 TMEM134Q9H6X4 195 aa17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 DLGAP2Q9P1A6 1054 aa17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 PCDHA7Q9UN72 937 aa17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 RBM19Q9Y4C8 960 aaKnown RBP17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 PCDHB2Q9Y5E7 798 aa17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 MAP1BP46821 2468 aaKnown RBP17.28■□□□□ 0.36
CHMP1A-206ENST00000549139 PHLPP2Q6ZVD8 1323 aa17.27■□□□□ 0.36
CHMP1A-206ENST00000549139 CCDC169A6NNP5 214 aa17.27■□□□□ 0.36
CHMP1A-206ENST00000549139 SFI1A8K8P3 1242 aa17.27■□□□□ 0.36
CHMP1A-206ENST00000549139 K7ERI5 159 aa17.27■□□□□ 0.36
CHMP1A-206ENST00000549139 ACKR2O00590 384 aa17.27■□□□□ 0.36
CHMP1A-206ENST00000549139 CFHP08603 1231 aa17.27■□□□□ 0.36
CHMP1A-206ENST00000549139 PLS3P13797 630 aa17.27■□□□□ 0.36
CHMP1A-206ENST00000549139 KLRC2P26717 231 aa17.27■□□□□ 0.36
CHMP1A-206ENST00000549139 RAD51AP2Q09MP3 1159 aa17.27■□□□□ 0.36
CHMP1A-206ENST00000549139 PUM1Q14671 1186 aaKnown RBP eCLIP17.27■□□□□ 0.36
CHMP1A-206ENST00000549139 LONRF3Q496Y0 759 aa17.27■□□□□ 0.36
CHMP1A-206ENST00000549139 GLB1LQ6UWU2 654 aa17.27■□□□□ 0.36
CHMP1A-206ENST00000549139 ZNF280BQ86YH2 543 aa17.27■□□□□ 0.36
CHMP1A-206ENST00000549139 SPIRE2Q8WWL2 714 aa17.27■□□□□ 0.36
CHMP1A-206ENST00000549139 PGBD4Q96DM1 585 aa17.27■□□□□ 0.36
CHMP1A-206ENST00000549139 CPB2Q96IY4 423 aa17.27■□□□□ 0.36
CHMP1A-206ENST00000549139 EMILIN2Q9BXX0 1053 aa17.27■□□□□ 0.36
CHMP1A-206ENST00000549139 KMT5AQ9NQR1 393 aa17.27■□□□□ 0.36
CHMP1A-206ENST00000549139 DLL3Q9NYJ7 618 aa17.27■□□□□ 0.36
CHMP1A-206ENST00000549139 LARSQ9P2J5 1176 aaKnown RBP17.27■□□□□ 0.36
CHMP1A-206ENST00000549139 EPS15L1Q9UBC2 864 aa17.27■□□□□ 0.36
CHMP1A-206ENST00000549139 TRIP11Q15643 1979 aa17.26■□□□□ 0.35
CHMP1A-206ENST00000549139 A0A087X0B3 334 aa17.26■□□□□ 0.35
CHMP1A-206ENST00000549139 NPHP3-ACAD11A0A0J9YXS1 232 aa17.26■□□□□ 0.35
CHMP1A-206ENST00000549139 B4GALT5O43286 388 aa17.26■□□□□ 0.35
CHMP1A-206ENST00000549139 PAPLNO95428 1278 aa17.26■□□□□ 0.35
CHMP1A-206ENST00000549139 PRKCBP05771 671 aa17.26■□□□□ 0.35
CHMP1A-206ENST00000549139 NCLP19338 710 aaKnown RBP17.26■□□□□ 0.35
CHMP1A-206ENST00000549139 ME1P48163 572 aa17.26■□□□□ 0.35
CHMP1A-206ENST00000549139 SMTNP53814 917 aa17.26■□□□□ 0.35
CHMP1A-206ENST00000549139 SHC4Q6S5L8 630 aa17.26■□□□□ 0.35
CHMP1A-206ENST00000549139 SV2BQ7L1I2 683 aa17.26■□□□□ 0.35
CHMP1A-206ENST00000549139 SLC44A3Q8N4M1 653 aa17.26■□□□□ 0.35
CHMP1A-206ENST00000549139 RIN2Q8WYP3 895 aaPredicted RBP17.26■□□□□ 0.35
CHMP1A-206ENST00000549139 REEP2Q9BRK0 252 aa17.26■□□□□ 0.35
CHMP1A-206ENST00000549139 PANK2Q9BZ23 570 aa17.26■□□□□ 0.35
CHMP1A-206ENST00000549139 TBC1D17Q9HA65 648 aa17.26■□□□□ 0.35
CHMP1A-206ENST00000549139 WDR6Q9NNW5 1121 aaKnown RBP17.26■□□□□ 0.35
CHMP1A-206ENST00000549139 ARHGAP28Q9P2N2 729 aa17.26■□□□□ 0.35
CHMP1A-206ENST00000549139 STK39Q9UEW8 545 aa17.26■□□□□ 0.35
CHMP1A-206ENST00000549139 INPP5FQ9Y2H2 1132 aa17.26■□□□□ 0.35
CHMP1A-206ENST00000549139 CACNA1GO43497 2377 aa17.26■□□□□ 0.35
CHMP1A-206ENST00000549139 DOCK6Q96HP0 2047 aa17.26■□□□□ 0.35
CHMP1A-206ENST00000549139 CNTNAP2Q9UHC6 1331 aa17.25■□□□□ 0.35
CHMP1A-206ENST00000549139 DDHD2O94830 711 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms