RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 KCNT2Q6UVM3 1135 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 KIAA0895Q8NCT3 520 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 GSTCDQ8NEC7 633 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 MYLIPQ8WY64 445 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 MS4A3Q96HJ5 214 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 GSDMAQ96QA5 445 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 GAS2L1Q99501 681 aaPredicted RBP10.47□□□□□ -0.73
RAB5B-205ENST00000549034 PLVAPQ9BX97 442 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 ALG13Q9NP73 1137 aaKnown RBP10.47□□□□□ -0.73
RAB5B-205ENST00000549034 TOPORSQ9NS56 1045 aaPredicted RBP10.47□□□□□ -0.73
RAB5B-205ENST00000549034 RMND1Q9NWS8 449 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 SPG21Q9NZD8 308 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 DNAJB4Q9UDY4 337 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 PLAGL2Q9UPG8 496 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 MAPK8IP1Q9UQF2 711 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 STYXL1Q9Y6J8 313 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 SMIM28A0A1B0GU29 152 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 GOLGA8IPA6NC78 632 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 GOLGA8JA6NMD2 632 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 LACTBL1A8MY62 500 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 C5orf67F2Z3F1 127 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 NRP1O14786 923 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 TGFB1I1O43294 461 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 FGF18O76093 207 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 GALTP07902 379 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 GARTP22102 1010 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 ADSSP30520 456 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 SLC11A1P49279 550 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 SPAG1Q07617 926 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 GLRA4Q5JXX5 417 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 ZBTB41Q5SVQ8 909 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 ALKAL1Q6UXT8 129 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 COLGALT2Q8IYK4 626 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 RDH13Q8NBN7 331 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 MICAL1Q8TDZ2 1067 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 GDPD5Q8WTR4 605 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 RABGGTAQ92696 567 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 RNF25Q96BH1 459 aaPredicted RBP10.46□□□□□ -0.73
RAB5B-205ENST00000549034 SAAL1Q96ER3 474 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 GUCD1Q96NT3 240 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 CBWD1Q9BRT8 395 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 FAM213AQ9BRX8 229 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 TMEM175Q9BSA9 504 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 C11orf84Q9BUA3 381 aaPredicted RBP10.46□□□□□ -0.73
RAB5B-205ENST00000549034 COLEC11Q9BWP8 271 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 PLEKHA5Q9HAU0 1116 aa10.46□□□□□ -0.73
RAB5B-205ENST00000549034 PUF60Q9UHX1 559 aaKnown RBP10.46□□□□□ -0.73
RAB5B-205ENST00000549034 RALGAPA2Q2PPJ7 1873 aa10.45□□□□□ -0.74
RAB5B-205ENST00000549034 KIAA1671Q9BY89 1806 aa10.45□□□□□ -0.74
RAB5B-205ENST00000549034 COL4A6Q14031 1691 aa10.45□□□□□ -0.74
RAB5B-205ENST00000549034 UBE4BO95155 1302 aa10.45□□□□□ -0.74
RAB5B-205ENST00000549034 PTGESO14684 152 aa10.45□□□□□ -0.74
RAB5B-205ENST00000549034 GRM6O15303 877 aa10.45□□□□□ -0.74
RAB5B-205ENST00000549034 INPPL1O15357 1258 aa10.45□□□□□ -0.74
RAB5B-205ENST00000549034 CSPG5O95196 566 aa10.45□□□□□ -0.74
RAB5B-205ENST00000549034 ITGB1P05556 798 aa10.45□□□□□ -0.74
RAB5B-205ENST00000549034 CXCL8P10145 99 aa10.45□□□□□ -0.74
RAB5B-205ENST00000549034 SNRPFP62306 86 aaKnown RBP10.45□□□□□ -0.74
RAB5B-205ENST00000549034 GRIK3Q13003 919 aa10.45□□□□□ -0.74
RAB5B-205ENST00000549034 ADGRE1Q14246 886 aa10.45□□□□□ -0.74
RAB5B-205ENST00000549034 XKR4Q5GH76 650 aa10.45□□□□□ -0.74
RAB5B-205ENST00000549034 ZNF658Q5TYW1 1059 aaPredicted RBP10.45□□□□□ -0.74
RAB5B-205ENST00000549034 CRELD2Q6UXH1 353 aaPredicted RBP10.45□□□□□ -0.74
RAB5B-205ENST00000549034 HS2ST1Q7LGA3 356 aa10.45□□□□□ -0.74
RAB5B-205ENST00000549034 CD302Q8IX05 232 aa10.45□□□□□ -0.74
RAB5B-205ENST00000549034 SMYD4Q8IYR2 804 aaPredicted RBP10.45□□□□□ -0.74
RAB5B-205ENST00000549034 GPD1LQ8N335 351 aa10.45□□□□□ -0.74
RAB5B-205ENST00000549034 ZSWIM2Q8NEG5 633 aa10.45□□□□□ -0.74
RAB5B-205ENST00000549034 SPPL3Q8TCT6 385 aa10.45□□□□□ -0.74
RAB5B-205ENST00000549034 POF1BQ8WVV4 589 aa10.45□□□□□ -0.74
RAB5B-205ENST00000549034 P2RX5Q93086 422 aa10.45□□□□□ -0.74
RAB5B-205ENST00000549034 CPSF3Q9UKF6 684 aaKnown RBP10.45□□□□□ -0.74
RAB5B-205ENST00000549034 MAN1B1Q9UKM7 699 aa10.45□□□□□ -0.74
RAB5B-205ENST00000549034 TTC26A0AVF1 554 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 CARNS1A5YM72 827 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 CASTOR2A6NHX0 329 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 ZNF233A6NK53 670 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 BIN1O00499 593 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 KIAA0391O15091 583 aaKnown RBP10.44□□□□□ -0.74
RAB5B-205ENST00000549034 MEFVO15553 781 aaPredicted RBP10.44□□□□□ -0.74
RAB5B-205ENST00000549034 GALR2O43603 387 aaPredicted RBP10.44□□□□□ -0.74
RAB5B-205ENST00000549034 CALUO43852 315 aaPredicted RBP10.44□□□□□ -0.74
RAB5B-205ENST00000549034 EXTL3O43909 919 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 B4GALT3O60512 393 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 LPXNO60711 386 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 TADA2AO75478 443 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 KCNE1P15382 129 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 FOSL2P15408 326 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 PPM1AP35813 382 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 PRCPP42785 496 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 CYP2J2P51589 502 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 PLCB3Q01970 1234 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 PPP2R3AQ06190 1150 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 TUSC3Q13454 348 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 CCDC85BQ15834 202 aaPredicted RBP10.44□□□□□ -0.74
RAB5B-205ENST00000549034 ENOX2Q16206 610 aaKnown RBP10.44□□□□□ -0.74
RAB5B-205ENST00000549034 PTPROQ16827 1216 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 BMT2Q1RMZ1 405 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 SLC39A11Q8N1S5 342 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 MICALL1Q8N3F8 863 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms