RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 LNX1Q8TBB1 728 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-218ENST00000548945 CLSTN3Q9BQT9 956 aa14.19□□□□□ -0.14
PTCH1-218ENST00000548945 PAAF1Q9BRP4 392 aa14.19□□□□□ -0.14
PTCH1-218ENST00000548945 CCDC113Q9H0I3 377 aa14.19□□□□□ -0.14
PTCH1-218ENST00000548945 TBC1D17Q9HA65 648 aa14.19□□□□□ -0.14
PTCH1-218ENST00000548945 CITO14578 2027 aa14.19□□□□□ -0.14
PTCH1-218ENST00000548945 A0A087WWV3 80 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 ARHGEF35A5YM69 484 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 CASTOR2A6NHX0 329 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 TTLL13PA6NNM8 815 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 TMEM189-UBE2V1I3L0A0 370 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 STK25O00506 426 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 XYLBO75191 536 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 PRKCBP05771 671 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 RFX1P22670 979 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 FSHRP23945 695 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 NEK4P51957 841 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 EFNA5P52803 228 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 TMEM132AQ24JP5 1023 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 UVSSAQ2YD98 709 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 DCAF4L1Q3SXM0 396 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 HAUS3Q68CZ6 603 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 PADI6Q6TGC4 694 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-218ENST00000548945 DEPTORQ8TB45 409 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 GPR152Q8TDT2 470 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 BSNDQ8WZ55 320 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 RABGGTAQ92696 567 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 FOXP1Q9H334 677 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-218ENST00000548945 ARHGEF3Q9NR81 526 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 SNTG2Q9NY99 539 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 CA14Q9ULX7 337 aa14.18□□□□□ -0.14
PTCH1-218ENST00000548945 OR52Z1P0C646 297 aa14.17□□□□□ -0.14
PTCH1-218ENST00000548945 PPM1LQ5SGD2 360 aa14.17□□□□□ -0.14
PTCH1-218ENST00000548945 POTEGQ6S5H5 508 aa14.17□□□□□ -0.14
PTCH1-218ENST00000548945 MTSS1LQ765P7 747 aa14.17□□□□□ -0.14
PTCH1-218ENST00000548945 APBB1IPQ7Z5R6 666 aaPredicted RBP14.17□□□□□ -0.14
PTCH1-218ENST00000548945 NOSTRINQ8IVI9 506 aa14.17□□□□□ -0.14
PTCH1-218ENST00000548945 ADSSL1Q8N142 457 aa14.17□□□□□ -0.14
PTCH1-218ENST00000548945 KIFAP3Q92845 792 aa14.17□□□□□ -0.14
PTCH1-218ENST00000548945 SHDQ96IW2 340 aa14.17□□□□□ -0.14
PTCH1-218ENST00000548945 IFT74Q96LB3 600 aa14.17□□□□□ -0.14
PTCH1-218ENST00000548945 CACNG4Q9UBN1 327 aa14.17□□□□□ -0.14
PTCH1-218ENST00000548945 CDH7Q9ULB5 785 aa14.17□□□□□ -0.14
PTCH1-218ENST00000548945 NUMBLQ9Y6R0 609 aa14.17□□□□□ -0.14
PTCH1-218ENST00000548945 C8AP07357 584 aa14.16□□□□□ -0.14
PTCH1-218ENST00000548945 FGFR3P22607 806 aa14.16□□□□□ -0.14
PTCH1-218ENST00000548945 TRAPPC10P48553 1259 aa14.16□□□□□ -0.14
PTCH1-218ENST00000548945 FOSBP53539 338 aa14.16□□□□□ -0.14
PTCH1-218ENST00000548945 STARD6P59095 220 aa14.16□□□□□ -0.14
PTCH1-218ENST00000548945 RAB33AQ14088 237 aa14.16□□□□□ -0.14
PTCH1-218ENST00000548945 DCLRE1AQ6PJP8 1040 aa14.16□□□□□ -0.14
PTCH1-218ENST00000548945 GRASPQ7Z6J2 395 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-218ENST00000548945 CEP57Q86XR8 500 aa14.16□□□□□ -0.14
PTCH1-218ENST00000548945 HASPINQ8TF76 798 aa14.16□□□□□ -0.14
PTCH1-218ENST00000548945 UROC1Q96N76 676 aa14.16□□□□□ -0.14
PTCH1-218ENST00000548945 PPP1R10Q96QC0 940 aaKnown RBP14.16□□□□□ -0.14
PTCH1-218ENST00000548945 LLPHQ9BRT6 129 aaKnown RBP14.16□□□□□ -0.14
PTCH1-218ENST00000548945 DLGAP2Q9P1A6 1054 aa14.16□□□□□ -0.14
PTCH1-218ENST00000548945 KCNH3Q9ULD8 1083 aa14.16□□□□□ -0.14
PTCH1-218ENST00000548945 SIT1Q9Y3P8 196 aa14.16□□□□□ -0.14
PTCH1-218ENST00000548945 STK24Q9Y6E0 443 aa14.16□□□□□ -0.14
PTCH1-218ENST00000548945 F5P12259 2224 aa14.16□□□□□ -0.14
PTCH1-218ENST00000548945 MYH11P35749 1972 aa14.15□□□□□ -0.14
PTCH1-218ENST00000548945 TRAPPC3O43617 180 aa14.15□□□□□ -0.14
PTCH1-218ENST00000548945 FXR2P51116 673 aaKnown RBP eCLIP14.15□□□□□ -0.14
PTCH1-218ENST00000548945 ST3GAL1Q11201 340 aa14.15□□□□□ -0.14
PTCH1-218ENST00000548945 AXDND1Q5T1B0 1012 aaPredicted RBP14.15□□□□□ -0.14
PTCH1-218ENST00000548945 EEF1DP3Q658K8 133 aa14.15□□□□□ -0.14
PTCH1-218ENST00000548945 FGF13Q92913 245 aa14.15□□□□□ -0.14
PTCH1-218ENST00000548945 FGF14Q92915 247 aa14.15□□□□□ -0.14
PTCH1-218ENST00000548945 C8orf76Q96K31 380 aa14.15□□□□□ -0.14
PTCH1-218ENST00000548945 MTRRQ9UBK8 725 aa14.15□□□□□ -0.14
PTCH1-218ENST00000548945 BACE2Q9Y5Z0 518 aa14.15□□□□□ -0.14
PTCH1-218ENST00000548945 GPR179Q6PRD1 2367 aa14.15□□□□□ -0.14
PTCH1-218ENST00000548945 PHLPP2Q6ZVD8 1323 aa14.15□□□□□ -0.15
PTCH1-218ENST00000548945 ADAM12O43184 909 aa14.14□□□□□ -0.15
PTCH1-218ENST00000548945 B3GAT3O94766 335 aa14.14□□□□□ -0.15
PTCH1-218ENST00000548945 LMNAP02545 664 aaKnown RBP14.14□□□□□ -0.15
PTCH1-218ENST00000548945 EDN1P05305 212 aa14.14□□□□□ -0.15
PTCH1-218ENST00000548945 OR1D2P34982 312 aa14.14□□□□□ -0.15
PTCH1-218ENST00000548945 PDIA5Q14554 519 aa14.14□□□□□ -0.15
PTCH1-218ENST00000548945 ZNF174Q15697 407 aa14.14□□□□□ -0.15
PTCH1-218ENST00000548945 UPP1Q16831 310 aa14.14□□□□□ -0.15
PTCH1-218ENST00000548945 NT5DC1Q5TFE4 455 aa14.14□□□□□ -0.15
PTCH1-218ENST00000548945 ATF7IP2Q5U623 682 aa14.14□□□□□ -0.15
PTCH1-218ENST00000548945 ZC3H14Q6PJT7 736 aaKnown RBP14.14□□□□□ -0.15
PTCH1-218ENST00000548945 PARM1Q6UWI2 310 aa14.14□□□□□ -0.15
PTCH1-218ENST00000548945 ANKS3Q6ZW76 656 aa14.14□□□□□ -0.15
PTCH1-218ENST00000548945 ERMP1Q7Z2K6 904 aa14.14□□□□□ -0.15
PTCH1-218ENST00000548945 FBXO18Q8NFZ0 1043 aa14.14□□□□□ -0.15
PTCH1-218ENST00000548945 PJA1Q8NG27 643 aa14.14□□□□□ -0.15
PTCH1-218ENST00000548945 SLC7A14Q8TBB6 771 aa14.14□□□□□ -0.15
PTCH1-218ENST00000548945 CXCL16Q9H2A7 254 aa14.14□□□□□ -0.15
PTCH1-218ENST00000548945 LIMCH1Q9UPQ0 1083 aa14.14□□□□□ -0.15
PTCH1-218ENST00000548945 TNFSF13BQ9Y275 285 aa14.14□□□□□ -0.15
PTCH1-218ENST00000548945 GDAQ9Y2T3 454 aa14.14□□□□□ -0.15
PTCH1-218ENST00000548945 PDCD11Q14690 1871 aaKnown RBP14.14□□□□□ -0.15
PTCH1-218ENST00000548945 PATJQ8NI35 1801 aa14.13□□□□□ -0.15
PTCH1-218ENST00000548945 K7ERI5 159 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms