RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 CSF2RAP15509 400 aa17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 ARL2P36404 184 aa17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 SLC26A2P50443 739 aa17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 CCL23P55773 120 aa17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 FPGSQ05932 587 aa17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 BMS1Q14692 1282 aaKnown RBP17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 DGKDQ16760 1214 aa17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 ASAP3Q8TDY4 903 aa17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 TMEM174Q8WUU8 243 aa17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 HIPK3Q9H422 1215 aa17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 RNPEPQ9H4A4 650 aa17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 PCIF1Q9H4Z3 704 aa17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 ANKZF1Q9H8Y5 726 aa17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 SALL4Q9UJQ4 1053 aa17.91■□□□□ 0.46
CHMP1A-204ENST00000547687 TRIM49P0CI25 452 aa17.9■□□□□ 0.46
CHMP1A-204ENST00000547687 TRIM49CP0CI26 452 aa17.9■□□□□ 0.46
CHMP1A-204ENST00000547687 ACRP10323 421 aa17.9■□□□□ 0.46
CHMP1A-204ENST00000547687 GLRA2P23416 452 aa17.9■□□□□ 0.46
CHMP1A-204ENST00000547687 JAM2P57087 298 aa17.9■□□□□ 0.46
CHMP1A-204ENST00000547687 PTK2Q05397 1052 aa17.9■□□□□ 0.46
CHMP1A-204ENST00000547687 BFSP1Q12934 665 aa17.9■□□□□ 0.46
CHMP1A-204ENST00000547687 DRP2Q13474 957 aa17.9■□□□□ 0.46
CHMP1A-204ENST00000547687 IQCEQ6IPM2 695 aa17.9■□□□□ 0.46
CHMP1A-204ENST00000547687 GJB7Q6PEY0 223 aa17.9■□□□□ 0.46
CHMP1A-204ENST00000547687 MAP4K3Q8IVH8 894 aa17.9■□□□□ 0.46
CHMP1A-204ENST00000547687 C12orf56Q8IXR9 622 aa17.9■□□□□ 0.46
CHMP1A-204ENST00000547687 NOX5Q96PH1 765 aa17.9■□□□□ 0.46
CHMP1A-204ENST00000547687 ERAP1Q9NZ08 941 aa17.9■□□□□ 0.46
CHMP1A-204ENST00000547687 AJAP1Q9UKB5 411 aaPredicted RBP17.9■□□□□ 0.46
CHMP1A-204ENST00000547687 TRPC6Q9Y210 931 aa17.9■□□□□ 0.46
CHMP1A-204ENST00000547687 TET1Q8NFU7 2136 aa17.9■□□□□ 0.46
CHMP1A-204ENST00000547687 KAT6AQ92794 2004 aa17.9■□□□□ 0.46
CHMP1A-204ENST00000547687 KRT13P13646 458 aa17.89■□□□□ 0.46
CHMP1A-204ENST00000547687 PRKCIP41743 596 aa17.89■□□□□ 0.46
CHMP1A-204ENST00000547687 CKAP4Q07065 602 aaKnown RBP17.89■□□□□ 0.46
CHMP1A-204ENST00000547687 CBWD6Q4V339 395 aa17.89■□□□□ 0.46
CHMP1A-204ENST00000547687 CBWD3Q5JTY5 395 aa17.89■□□□□ 0.46
CHMP1A-204ENST00000547687 CBWD5Q5RIA9 395 aa17.89■□□□□ 0.46
CHMP1A-204ENST00000547687 ZNF571Q7Z3V5 609 aaPredicted RBP17.89■□□□□ 0.46
CHMP1A-204ENST00000547687 HVCN1Q96D96 273 aa17.89■□□□□ 0.46
CHMP1A-204ENST00000547687 SCLYQ96I15 445 aa17.89■□□□□ 0.46
CHMP1A-204ENST00000547687 CAPZA3Q96KX2 299 aa17.89■□□□□ 0.46
CHMP1A-204ENST00000547687 MMS19Q96T76 1030 aa17.89■□□□□ 0.46
CHMP1A-204ENST00000547687 CBWD1Q9BRT8 395 aa17.89■□□□□ 0.46
CHMP1A-204ENST00000547687 ARHGAP28Q9P2N2 729 aa17.89■□□□□ 0.46
CHMP1A-204ENST00000547687 PPME1Q9Y570 386 aa17.89■□□□□ 0.46
CHMP1A-204ENST00000547687 ZRANB2O95218 330 aaKnown RBP eCLIP17.89■□□□□ 0.45
CHMP1A-204ENST00000547687 NAP1L1P55209 391 aaKnown RBP17.89■□□□□ 0.45
CHMP1A-204ENST00000547687 SNRPFP62306 86 aaKnown RBP17.89■□□□□ 0.45
CHMP1A-204ENST00000547687 C10orf76Q5T2E6 689 aa17.89■□□□□ 0.45
CHMP1A-204ENST00000547687 MSANTD4Q8NCY6 345 aa17.89■□□□□ 0.45
CHMP1A-204ENST00000547687 TRAPPC12Q8WVT3 735 aa17.89■□□□□ 0.45
CHMP1A-204ENST00000547687 SUGCTQ9HAC7 445 aa17.89■□□□□ 0.45
CHMP1A-204ENST00000547687 SNX12Q9UMY4 172 aa17.89■□□□□ 0.45
CHMP1A-204ENST00000547687 EXOC7Q9UPT5 735 aa17.89■□□□□ 0.45
CHMP1A-204ENST00000547687 ANKRD63C9JTQ0 380 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 BUB1O43683 1085 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 HBP1O60381 514 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 KPNA6O60684 536 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 PPFIA4O75335 1185 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 PRLRP16471 622 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 STAT1P42224 750 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 MYL7Q01449 175 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 BRD3Q15059 726 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 NAB2Q15742 525 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 KIAA0753Q2KHM9 967 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 MFSD5Q6N075 450 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 CC2D1AQ6P1N0 951 aaPredicted RBP17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 INTS8Q75QN2 995 aaKnown RBP17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 C16orf59Q7L2K0 433 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 TAS1R3Q7RTX0 852 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 NOA1Q8NC60 698 aaKnown RBP17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 WNT8AQ9H1J5 351 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 FAM53CQ9NYF3 392 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 PRUNE2Q8WUY3 3088 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 EVPLQ92817 2033 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 LRRIQ4A6NIV6 560 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 ZNF185O15231 689 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 SEC31AO94979 1220 aaKnown RBP17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 RHOXF2BP0C7M4 288 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 FERP16591 822 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 NAMPTP43490 491 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 PSEN2P49810 448 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 MKRN4PQ13434 485 aaPredicted RBP17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 GDF6Q6KF10 455 aaPredicted RBP17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 LRRC71Q8N4P6 559 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 XXYLT1Q8NBI6 393 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 RPGRIP1Q96KN7 1286 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 RHOXF2Q9BQY4 288 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 C16orf70Q9BSU1 422 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 STK33Q9BYT3 514 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 INTS2Q9H0H0 1204 aaKnown RBP17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 HSPBP1Q9NZL4 362 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 KCNG1Q9UIX4 513 aa17.88■□□□□ 0.45
CHMP1A-204ENST00000547687 CHD9Q3L8U1 2897 aa17.87■□□□□ 0.45
CHMP1A-204ENST00000547687 IGKV6-21A0A0C4DH24 114 aa17.87■□□□□ 0.45
CHMP1A-204ENST00000547687 ANXA13P27216 316 aa17.87■□□□□ 0.45
CHMP1A-204ENST00000547687 ADSSP30520 456 aa17.87■□□□□ 0.45
CHMP1A-204ENST00000547687 VAMP7P51809 220 aa17.87■□□□□ 0.45
CHMP1A-204ENST00000547687 ZNF200P98182 395 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms