RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 ERC2O15083 957 aa5.3□□□□□ -1.56
SCAF11-210ENST00000547654 CFBP00751 764 aa5.3□□□□□ -1.56
SCAF11-210ENST00000547654 JUNP05412 331 aaKnown RBP5.3□□□□□ -1.56
SCAF11-210ENST00000547654 GNAT2P19087 354 aa5.3□□□□□ -1.56
SCAF11-210ENST00000547654 CD40P25942 277 aa5.3□□□□□ -1.56
SCAF11-210ENST00000547654 CYP2C19P33261 490 aa5.3□□□□□ -1.56
SCAF11-210ENST00000547654 RECQLP46063 649 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-210ENST00000547654 NEK3P51956 506 aa5.3□□□□□ -1.56
SCAF11-210ENST00000547654 POU5F1BQ06416 359 aa5.3□□□□□ -1.56
SCAF11-210ENST00000547654 TRIM25Q14258 630 aaKnown RBP5.3□□□□□ -1.56
SCAF11-210ENST00000547654 CSRP2Q16527 193 aa5.3□□□□□ -1.56
SCAF11-210ENST00000547654 IL31Q6EBC2 164 aa5.3□□□□□ -1.56
SCAF11-210ENST00000547654 CXorf67Q86X51 503 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-210ENST00000547654 SPICE1Q8N0Z3 855 aa5.3□□□□□ -1.56
SCAF11-210ENST00000547654 PJA1Q8NG27 643 aa5.3□□□□□ -1.56
SCAF11-210ENST00000547654 TIFAQ96CG3 184 aa5.3□□□□□ -1.56
SCAF11-210ENST00000547654 AHCYL2Q96HN2 611 aaKnown RBP5.3□□□□□ -1.56
SCAF11-210ENST00000547654 FUBP3Q96I24 572 aaKnown RBP eCLIP5.3□□□□□ -1.56
SCAF11-210ENST00000547654 ZNF512Q96ME7 567 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-210ENST00000547654 GPR101Q96P66 508 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-210ENST00000547654 SARGQ9BW04 601 aa5.3□□□□□ -1.56
SCAF11-210ENST00000547654 SLC13A1Q9BZW2 595 aa5.3□□□□□ -1.56
SCAF11-210ENST00000547654 C14orf93Q9H972 538 aaKnown RBP5.3□□□□□ -1.56
SCAF11-210ENST00000547654 TAGLN3Q9UI15 199 aa5.3□□□□□ -1.56
SCAF11-210ENST00000547654 DNAI1Q9UI46 699 aa5.3□□□□□ -1.56
SCAF11-210ENST00000547654 FZD1Q9UP38 647 aa5.3□□□□□ -1.56
SCAF11-210ENST00000547654 PPP2R3BQ9Y5P8 575 aa5.3□□□□□ -1.56
SCAF11-210ENST00000547654 MRFAP1Q9Y605 127 aa5.3□□□□□ -1.56
SCAF11-210ENST00000547654 CECR2Q9BXF3 1484 aa5.3□□□□□ -1.56
SCAF11-210ENST00000547654 A0A1W2PR48 441 aa5.29□□□□□ -1.56
SCAF11-210ENST00000547654 K7ESF4 209 aa5.29□□□□□ -1.56
SCAF11-210ENST00000547654 MASP2O00187 686 aa5.29□□□□□ -1.56
SCAF11-210ENST00000547654 DAPK3O43293 454 aa5.29□□□□□ -1.56
SCAF11-210ENST00000547654 B3GALT2O43825 422 aa5.29□□□□□ -1.56
SCAF11-210ENST00000547654 VCAM1P19320 739 aa5.29□□□□□ -1.56
SCAF11-210ENST00000547654 KIR2DL3P43628 341 aa5.29□□□□□ -1.56
SCAF11-210ENST00000547654 ATXN1P54253 815 aaKnown RBP5.29□□□□□ -1.56
SCAF11-210ENST00000547654 NPEPPSP55786 919 aa5.29□□□□□ -1.56
SCAF11-210ENST00000547654 CD69Q07108 199 aa5.29□□□□□ -1.56
SCAF11-210ENST00000547654 KLF1Q13351 362 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-210ENST00000547654 ARHGAP29Q52LW3 1261 aa5.29□□□□□ -1.56
SCAF11-210ENST00000547654 TMEM240Q5SV17 173 aa5.29□□□□□ -1.56
SCAF11-210ENST00000547654 PRIMA1Q86XR5 153 aa5.29□□□□□ -1.56
SCAF11-210ENST00000547654 LILRA3Q8N6C8 439 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-210ENST00000547654 C7orf31Q8N865 590 aa5.29□□□□□ -1.56
SCAF11-210ENST00000547654 MDGA1Q8NFP4 955 aa5.29□□□□□ -1.56
SCAF11-210ENST00000547654 CPT1CQ8TCG5 803 aa5.29□□□□□ -1.56
SCAF11-210ENST00000547654 TTC17Q96AE7 1141 aa5.29□□□□□ -1.56
SCAF11-210ENST00000547654 PPCSQ9HAB8 311 aa5.29□□□□□ -1.56
SCAF11-210ENST00000547654 TCF7L1Q9HCS4 588 aa5.29□□□□□ -1.56
SCAF11-210ENST00000547654 MSRAQ9UJ68 235 aa5.29□□□□□ -1.56
SCAF11-210ENST00000547654 SORCS3Q9UPU3 1222 aa5.29□□□□□ -1.56
SCAF11-210ENST00000547654 DAAM1Q9Y4D1 1078 aa5.29□□□□□ -1.56
SCAF11-210ENST00000547654 NUMBLQ9Y6R0 609 aa5.29□□□□□ -1.56
SCAF11-210ENST00000547654 ZAR1LA6NP61 321 aa5.28□□□□□ -1.56
SCAF11-210ENST00000547654 RECQL4O94761 1208 aa5.28□□□□□ -1.56
SCAF11-210ENST00000547654 LY86O95711 162 aa5.28□□□□□ -1.56
SCAF11-210ENST00000547654 GYPEP15421 78 aa5.28□□□□□ -1.56
SCAF11-210ENST00000547654 PHKG2P15735 406 aa5.28□□□□□ -1.56
SCAF11-210ENST00000547654 KPNA1P52294 538 aaPredicted RBP5.28□□□□□ -1.56
SCAF11-210ENST00000547654 GTF2H3Q13889 308 aa5.28□□□□□ -1.56
SCAF11-210ENST00000547654 GBX1Q14549 363 aa5.28□□□□□ -1.56
SCAF11-210ENST00000547654 SAFBQ15424 915 aaKnown RBP eCLIP5.28□□□□□ -1.56
SCAF11-210ENST00000547654 TIGD2Q4W5G0 525 aa5.28□□□□□ -1.56
SCAF11-210ENST00000547654 DCAF17Q5H9S7 520 aaPredicted RBP5.28□□□□□ -1.56
SCAF11-210ENST00000547654 HECTD2Q5U5R9 776 aa5.28□□□□□ -1.56
SCAF11-210ENST00000547654 STRIP1Q5VSL9 837 aa5.28□□□□□ -1.56
SCAF11-210ENST00000547654 BROXQ5VW32 411 aa5.28□□□□□ -1.56
SCAF11-210ENST00000547654 UNC5BQ8IZJ1 945 aa5.28□□□□□ -1.56
SCAF11-210ENST00000547654 CPA6Q8N4T0 437 aa5.28□□□□□ -1.56
SCAF11-210ENST00000547654 MSL3Q8N5Y2 521 aaKnown RBP5.28□□□□□ -1.56
SCAF11-210ENST00000547654 ENAHQ8N8S7 591 aaPredicted RBP5.28□□□□□ -1.56
SCAF11-210ENST00000547654 ST8SIA2Q92186 375 aa5.28□□□□□ -1.56
SCAF11-210ENST00000547654 LRGUKQ96M69 825 aa5.28□□□□□ -1.56
SCAF11-210ENST00000547654 BICRAQ9NZM4 1560 aa5.28□□□□□ -1.56
SCAF11-210ENST00000547654 FRMPD2Q68DX3 1309 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-210ENST00000547654 ANO9A1A5B4 782 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 GRID2IPA4D2P6 1211 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 TMEM127O75204 238 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 STC2O76061 302 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 IL33O95760 270 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 CD53P19397 219 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 SESN3P58005 492 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 ERVK-21P61565 698 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 IRX6P78412 446 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-210ENST00000547654 SPIDRQ14159 915 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 COBLL1Q53SF7 1204 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 INO80DQ53TQ3 878 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-210ENST00000547654 PITRM1Q5JRX3 1037 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 LRCH2Q5VUJ6 765 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 ANO1Q5XXA6 986 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 MORC1Q86VD1 984 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 RASSF3Q86WH2 238 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 ADGRG3Q86Y34 549 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 AMOTL1Q8IY63 956 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 CBARPQ8N350 705 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-210ENST00000547654 CLRN3Q8NCR9 226 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 RPGRQ92834 1020 aaKnown RBP5.27□□□□□ -1.57
SCAF11-210ENST00000547654 SLC5A5Q92911 643 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 ORAI2Q96SN7 254 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms