RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-210	ENST00000547374	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
BRF1-210	ENST00000547374	KAT6A	Q92794	2004 aa		13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	CA4	P22748	312 aa		13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	DMP1	Q13316	513 aa	Predicted RBP	13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	IZUMO3	Q5VZ72	239 aa		13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	DCUN1D2	Q6PH85	259 aa		13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.85	□□□□□ -0.19	3e-6	■■■■■ 50.8
BRF1-210	ENST00000547374	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	USP15	Q9Y4E8	981 aa	Predicted RBP	13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	LRRIQ4	A6NIV6	560 aa		13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	EIF3D	O15371	548 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	QARS	P47897	775 aa	Known RBP	13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	LACTB	P83111	547 aa	Predicted RBP	13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	VPS72	Q15906	364 aa		13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	CNGA2	Q16280	664 aa		13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	UGCG	Q16739	394 aa		13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	SLCO1B3	Q9NPD5	702 aa		13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	SAE1	Q9UBE0	346 aa	Predicted RBP	13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	BTNL10	A8MVZ5	291 aa		13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	ANP32D	O95626	131 aa		13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	PAX7	P23759	505 aa		13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	TARS	P26639	723 aa	Known RBP	13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	ALDH5A1	P51649	535 aa	Predicted RBP	13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	NOP14	P78316	857 aa	Known RBP	13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	PODN	Q7Z5L7	613 aa		13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	FAM228A	Q86W67	206 aa		13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	WNT8A	Q9H1J5	351 aa		13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	TMEM206	Q9H813	350 aa		13.85	□□□□□ -0.19
BRF1-210	ENST00000547374	MYH11	P35749	1972 aa		13.85	□□□□□ -0.19
BRF1-210	ENST00000547374		H0YIN7	160 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	ATP9A	O75110	1047 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	P4HB	P07237	508 aa	Known RBP	13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	NPR1	P16066	1061 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	PTGIR	P43119	386 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	OVGP1	Q12889	678 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	PPP2R5A	Q15172	486 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	P3H1	Q32P28	736 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	PRAMEF18	Q5VWM3	479 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	KRT39	Q6A163	491 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	SPATA21	Q7Z572	469 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	AGAP11	Q8TF27	550 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	ZDHHC15	Q96MV8	337 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	RUNDC3B	Q96NL0	473 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	TAAR1	Q96RJ0	339 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	EPB41L4B	Q9H329	900 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	GTPBP10	A4D1E9	387 aa	Known RBP	13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	CES2	O00748	559 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	RARG	P13631	454 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	PIK3CA	P42336	1068 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	FMO1	Q01740	532 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	POU5F1	Q01860	360 aa	Known RBP	13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	ZBTB16	Q05516	673 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	DRP2	Q13474	957 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	HHAT	Q5VTY9	493 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	ARHGEF16	Q5VV41	709 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	ARMC9	Q7Z3E5	817 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	YTHDF3	Q7Z739	585 aa	Known RBP	13.84	□□□□□ -0.19
BRF1-210	ENST00000547374		A0A1B0GUA9	196 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	SGK1	O00141	431 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	PDHA1	P08559	390 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	SLC8A1	P32418	973 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	RARRES1	P49788	294 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	LIG4	P49917	911 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	SETDB1	Q15047	1291 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	SV2A	Q7L0J3	742 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	LARGE2	Q8N3Y3	721 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	FBXL13	Q8NEE6	735 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	TLCD1	Q96CP7	247 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	ERP27	Q96DN0	273 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	RBM15	Q96T37	977 aa	Known RBP eCLIP	13.84	□□□□□ -0.19	6e-6	■■■■□ 19.9
BRF1-210	ENST00000547374	RAB20	Q9NX57	234 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	ADAM22	Q9P0K1	906 aa		13.84	□□□□□ -0.19
BRF1-210	ENST00000547374	LRRD1	A4D1F6	860 aa		13.83	□□□□□ -0.19
BRF1-210	ENST00000547374	PIK3R2	O00459	728 aa		13.83	□□□□□ -0.19
BRF1-210	ENST00000547374	CD19	P15391	556 aa		13.83	□□□□□ -0.19
BRF1-210	ENST00000547374	MMP13	P45452	471 aa		13.83	□□□□□ -0.19
BRF1-210	ENST00000547374	ATP11A	P98196	1134 aa		13.83	□□□□□ -0.19
BRF1-210	ENST00000547374	SMTNL2	Q2TAL5	461 aa		13.83	□□□□□ -0.19
BRF1-210	ENST00000547374	SWT1	Q5T5J6	900 aa	Known RBP	13.83	□□□□□ -0.19
BRF1-210	ENST00000547374	ZBTB33	Q86T24	672 aa		13.83	□□□□□ -0.19
BRF1-210	ENST00000547374	CDR2L	Q86X02	465 aa	Predicted RBP	13.83	□□□□□ -0.19
BRF1-210	ENST00000547374	RMDN3	Q96TC7	470 aa		13.83	□□□□□ -0.19
BRF1-210	ENST00000547374	MKNK1	Q9BUB5	465 aa		13.83	□□□□□ -0.19
BRF1-210	ENST00000547374	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.83	□□□□□ -0.19
BRF1-210	ENST00000547374	GABBR1	Q9UBS5	961 aa		13.83	□□□□□ -0.19
BRF1-210	ENST00000547374	CFH	P08603	1231 aa		13.83	□□□□□ -0.2
BRF1-210	ENST00000547374	CHRNB2	P17787	502 aa		13.83	□□□□□ -0.2
BRF1-210	ENST00000547374	GPS1	Q13098	491 aa		13.83	□□□□□ -0.2
BRF1-210	ENST00000547374	SWSAP1	Q6NVH7	229 aa		13.83	□□□□□ -0.2
BRF1-210	ENST00000547374	EEPD1	Q7L9B9	569 aa		13.83	□□□□□ -0.2
BRF1-210	ENST00000547374	ZBED8	Q8IZ13	594 aa		13.83	□□□□□ -0.2
BRF1-210	ENST00000547374	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.83	□□□□□ -0.2
BRF1-210	ENST00000547374	BORCS6	Q96GS4	357 aa		13.83	□□□□□ -0.2
BRF1-210	ENST00000547374	RMDN2	Q96LZ7	410 aa		13.83	□□□□□ -0.2
BRF1-210	ENST00000547374	HERPUD2	Q9BSE4	406 aa		13.83	□□□□□ -0.2
BRF1-210	ENST00000547374	ZWILCH	Q9H900	591 aa		13.83	□□□□□ -0.2
BRF1-210	ENST00000547374	HAO1	Q9UJM8	370 aa		13.83	□□□□□ -0.2
BRF1-210	ENST00000547374	AGTPBP1	Q9UPW5	1226 aa		13.83	□□□□□ -0.2
BRF1-210	ENST00000547374	NAALADL1	Q9UQQ1	740 aa		13.83	□□□□□ -0.2
BRF1-210	ENST00000547374	MAP3K6	O95382	1288 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms