RNA–Protein interactions for RNA: ENST00000546337.1

SCRIB-208, Transcript of scribbled planar cell polarity protein, humanhuman

TSL 3

Gene SCRIB, Length 516 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-208ENST00000546337 KCNB1Q14721 858 aa17.13■□□□□ 0.33
SCRIB-208ENST00000546337 NAB2Q15742 525 aa17.13■□□□□ 0.33
SCRIB-208ENST00000546337 BMT2Q1RMZ1 405 aa17.13■□□□□ 0.33
SCRIB-208ENST00000546337 SLC39A4Q6P5W5 647 aa17.13■□□□□ 0.33
SCRIB-208ENST00000546337 CDCA3Q99618 268 aaPredicted RBP17.13■□□□□ 0.33
SCRIB-208ENST00000546337 GBP3Q9H0R5 595 aa17.13■□□□□ 0.33
SCRIB-208ENST00000546337 BLZF1Q9H2G9 400 aa17.13■□□□□ 0.33
SCRIB-208ENST00000546337 GOLPH3LQ9H4A5 285 aa17.13■□□□□ 0.33
SCRIB-208ENST00000546337 ASB7Q9H672 318 aa17.13■□□□□ 0.33
SCRIB-208ENST00000546337 RPF1Q9H9Y2 349 aaKnown RBP17.13■□□□□ 0.33
SCRIB-208ENST00000546337 KIAA1586Q9HCI6 787 aa17.13■□□□□ 0.33
SCRIB-208ENST00000546337 EXOC1Q9NV70 894 aa17.13■□□□□ 0.33
SCRIB-208ENST00000546337 KLK14Q9P0G3 267 aa17.13■□□□□ 0.33
SCRIB-208ENST00000546337 TBC1D7Q9P0N9 293 aa17.13■□□□□ 0.33
SCRIB-208ENST00000546337 HCSTQ9UBK5 93 aa17.13■□□□□ 0.33
SCRIB-208ENST00000546337 DNAJB4Q9UDY4 337 aa17.13■□□□□ 0.33
SCRIB-208ENST00000546337 CPSF3Q9UKF6 684 aaKnown RBP17.13■□□□□ 0.33
SCRIB-208ENST00000546337 AGO2Q9UKV8 859 aaKnown RBP17.13■□□□□ 0.33
SCRIB-208ENST00000546337 DERAQ9Y315 318 aa17.13■□□□□ 0.33
SCRIB-208ENST00000546337 TTC26A0AVF1 554 aa17.12■□□□□ 0.33
SCRIB-208ENST00000546337 ANKRD63C9JTQ0 380 aa17.12■□□□□ 0.33
SCRIB-208ENST00000546337 TMEM189-UBE2V1I3L0A0 370 aa17.12■□□□□ 0.33
SCRIB-208ENST00000546337 FAM189A1O60320 539 aa17.12■□□□□ 0.33
SCRIB-208ENST00000546337 RHOBTB3O94955 611 aa17.12■□□□□ 0.33
SCRIB-208ENST00000546337 C1RP00736 705 aa17.12■□□□□ 0.33
SCRIB-208ENST00000546337 MYBP10242 640 aa17.12■□□□□ 0.33
SCRIB-208ENST00000546337 CYP3A5P20815 502 aa17.12■□□□□ 0.33
SCRIB-208ENST00000546337 RPL9P32969 192 aaKnown RBP17.12■□□□□ 0.33
SCRIB-208ENST00000546337 OR1G1P47890 313 aa17.12■□□□□ 0.33
SCRIB-208ENST00000546337 DPYDQ12882 1025 aa17.12■□□□□ 0.33
SCRIB-208ENST00000546337 ELAVL2Q12926 359 aaKnown RBP17.12■□□□□ 0.33
SCRIB-208ENST00000546337 SNW1Q13573 536 aaKnown RBP17.12■□□□□ 0.33
SCRIB-208ENST00000546337 COL19A1Q14993 1142 aa17.12■□□□□ 0.33
SCRIB-208ENST00000546337 SLC10A6Q3KNW5 377 aa17.12■□□□□ 0.33
SCRIB-208ENST00000546337 DCLRE1AQ6PJP8 1040 aa17.12■□□□□ 0.33
SCRIB-208ENST00000546337 NT5DC4Q86YG4 428 aa17.12■□□□□ 0.33
SCRIB-208ENST00000546337 CEP120Q8N960 986 aa17.12■□□□□ 0.33
SCRIB-208ENST00000546337 GOLGA5Q8TBA6 731 aa17.12■□□□□ 0.33
SCRIB-208ENST00000546337 TMEM174Q8WUU8 243 aa17.12■□□□□ 0.33
SCRIB-208ENST00000546337 POMGNT1Q8WZA1 660 aa17.12■□□□□ 0.33
SCRIB-208ENST00000546337 HAPLN2Q9GZV7 340 aa17.12■□□□□ 0.33
SCRIB-208ENST00000546337 TRANK1O15050 2925 aa17.12■□□□□ 0.33
SCRIB-208ENST00000546337 PRPF6O94906 941 aaKnown RBP17.11■□□□□ 0.33
SCRIB-208ENST00000546337 EFEMP2O95967 443 aa17.11■□□□□ 0.33
SCRIB-208ENST00000546337 RPN1P04843 607 aaKnown RBP17.11■□□□□ 0.33
SCRIB-208ENST00000546337 DNAJB1P25685 340 aa17.11■□□□□ 0.33
SCRIB-208ENST00000546337 ADSSP30520 456 aa17.11■□□□□ 0.33
SCRIB-208ENST00000546337 CASP5P51878 434 aa17.11■□□□□ 0.33
SCRIB-208ENST00000546337 UBE2HP62256 183 aa17.11■□□□□ 0.33
SCRIB-208ENST00000546337 TMC7Q7Z402 723 aa17.11■□□□□ 0.33
SCRIB-208ENST00000546337 MICAL1Q8TDZ2 1067 aa17.11■□□□□ 0.33
SCRIB-208ENST00000546337 GSDMAQ96QA5 445 aa17.11■□□□□ 0.33
SCRIB-208ENST00000546337 RMND1Q9NWS8 449 aa17.11■□□□□ 0.33
SCRIB-208ENST00000546337 NLRC5Q86WI3 1866 aa17.11■□□□□ 0.33
SCRIB-208ENST00000546337 NT5C1B-RDH14C9J2C7 533 aa17.1■□□□□ 0.33
SCRIB-208ENST00000546337 IL18RAPO95256 599 aa17.1■□□□□ 0.33
SCRIB-208ENST00000546337 SMC2O95347 1197 aa17.1■□□□□ 0.33
SCRIB-208ENST00000546337 SOD2P04179 222 aa17.1■□□□□ 0.33
SCRIB-208ENST00000546337 CTSAP10619 480 aa17.1■□□□□ 0.33
SCRIB-208ENST00000546337 HARSP12081 509 aaKnown RBP17.1■□□□□ 0.33
SCRIB-208ENST00000546337 OSTNP61366 133 aa17.1■□□□□ 0.33
SCRIB-208ENST00000546337 PPP2R3AQ06190 1150 aa17.1■□□□□ 0.33
SCRIB-208ENST00000546337 SMC1AQ14683 1233 aaKnown RBP17.1■□□□□ 0.33
SCRIB-208ENST00000546337 ZBTB6Q15916 424 aa17.1■□□□□ 0.33
SCRIB-208ENST00000546337 KMT5BQ4FZB7 885 aa17.1■□□□□ 0.33
SCRIB-208ENST00000546337 HS2ST1Q7LGA3 356 aa17.1■□□□□ 0.33
SCRIB-208ENST00000546337 C12orf56Q8IXR9 622 aa17.1■□□□□ 0.33
SCRIB-208ENST00000546337 GRAMD1CQ8IYS0 662 aa17.1■□□□□ 0.33
SCRIB-208ENST00000546337 RNF168Q8IYW5 571 aaPredicted RBP17.1■□□□□ 0.33
SCRIB-208ENST00000546337 MRPL43Q8N983 215 aaKnown RBP17.1■□□□□ 0.33
SCRIB-208ENST00000546337 SCFD1Q8WVM8 642 aa17.1■□□□□ 0.33
SCRIB-208ENST00000546337 TSHZ2Q9NRE2 1034 aa17.1■□□□□ 0.33
SCRIB-208ENST00000546337 UBQLN1Q9UMX0 589 aaKnown RBP17.1■□□□□ 0.33
SCRIB-208ENST00000546337 TRAPPC3O43617 180 aa17.09■□□□□ 0.33
SCRIB-208ENST00000546337 EXTL3O43909 919 aa17.09■□□□□ 0.33
SCRIB-208ENST00000546337 B4GALT3O60512 393 aa17.09■□□□□ 0.33
SCRIB-208ENST00000546337 KINO60870 393 aaKnown RBP17.09■□□□□ 0.33
SCRIB-208ENST00000546337 TADA2AO75478 443 aa17.09■□□□□ 0.33
SCRIB-208ENST00000546337 ERVFC1P60507 584 aa17.09■□□□□ 0.33
SCRIB-208ENST00000546337 KCNA1Q09470 495 aa17.09■□□□□ 0.33
SCRIB-208ENST00000546337 MYBPC2Q14324 1141 aa17.09■□□□□ 0.33
SCRIB-208ENST00000546337 SURF1Q15526 300 aa17.09■□□□□ 0.33
SCRIB-208ENST00000546337 KNOP1Q1ED39 458 aaKnown RBP17.09■□□□□ 0.33
SCRIB-208ENST00000546337 PDXDC1Q6P996 788 aa17.09■□□□□ 0.33
SCRIB-208ENST00000546337 VPS52Q8N1B4 723 aa17.09■□□□□ 0.33
SCRIB-208ENST00000546337 SPATA20Q8TB22 786 aa17.09■□□□□ 0.33
SCRIB-208ENST00000546337 TCF25Q9BQ70 676 aa17.09■□□□□ 0.33
SCRIB-208ENST00000546337 SLC39A2Q9NP94 309 aa17.09■□□□□ 0.33
SCRIB-208ENST00000546337 ADAM28Q9UKQ2 775 aa17.09■□□□□ 0.33
SCRIB-208ENST00000546337 SF3B1O75533 1304 aaKnown RBP eCLIP17.08■□□□□ 0.323e-6■■■■■ 44.6
SCRIB-208ENST00000546337 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.08■□□□□ 0.32
SCRIB-208ENST00000546337 PDXKO00764 312 aa17.08■□□□□ 0.32
SCRIB-208ENST00000546337 CASP1P29466 404 aa17.08■□□□□ 0.32
SCRIB-208ENST00000546337 LRPAP1P30533 357 aa17.08■□□□□ 0.32
SCRIB-208ENST00000546337 HOXD13P35453 343 aa17.08■□□□□ 0.32
SCRIB-208ENST00000546337 PBX3P40426 434 aa17.08■□□□□ 0.32
SCRIB-208ENST00000546337 CREMQ03060 361 aa17.08■□□□□ 0.32
SCRIB-208ENST00000546337 STK4Q13043 487 aa17.08■□□□□ 0.32
SCRIB-208ENST00000546337 ENOX2Q16206 610 aaKnown RBP17.08■□□□□ 0.32
SCRIB-208ENST00000546337 AAK1Q2M2I8 961 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms