RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 TUSC3Q13454 348 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 KCNB1Q14721 858 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 SLC10A6Q3KNW5 377 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 GLRA4Q5JXX5 417 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 ZBTB41Q5SVQ8 909 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 ARMCX5Q6P1M9 558 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 ALKAL1Q6UXT8 129 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 HS2ST1Q7LGA3 356 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 ELOA2Q8IYF1 753 aaPredicted RBP18.33■□□□□ 0.52
LTBR-215ENST00000546296 COLGALT2Q8IYK4 626 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 SLC39A11Q8N1S5 342 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 POF1BQ8WVV4 589 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 SMARCE1Q969G3 411 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 TMEM169Q96HH4 297 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 SNX27Q96L92 541 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 FAM213AQ9BRX8 229 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 COLEC11Q9BWP8 271 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 LMAN2LQ9H0V9 348 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 PCIF1Q9H4Z3 704 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 PLEKHA5Q9HAU0 1116 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 LMCD1Q9NZU5 365 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 STXBP5LQ9Y2K9 1186 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 PRG3Q9Y2Y8 225 aaPredicted RBP18.33■□□□□ 0.52
LTBR-215ENST00000546296 MTCH2Q9Y6C9 303 aa18.33■□□□□ 0.52
LTBR-215ENST00000546296 NRP1O14786 923 aa18.32■□□□□ 0.52
LTBR-215ENST00000546296 B4GALT3O60512 393 aa18.32■□□□□ 0.52
LTBR-215ENST00000546296 KIF20AO95235 890 aa18.32■□□□□ 0.52
LTBR-215ENST00000546296 PLCB3Q01970 1234 aa18.32■□□□□ 0.52
LTBR-215ENST00000546296 PPP2R3AQ06190 1150 aa18.32■□□□□ 0.52
LTBR-215ENST00000546296 DSC1Q08554 894 aa18.32■□□□□ 0.52
LTBR-215ENST00000546296 KNOP1Q1ED39 458 aaKnown RBP18.32■□□□□ 0.52
LTBR-215ENST00000546296 BMT2Q1RMZ1 405 aa18.32■□□□□ 0.52
LTBR-215ENST00000546296 KIAA0895Q8NCT3 520 aa18.32■□□□□ 0.52
LTBR-215ENST00000546296 MICAL1Q8TDZ2 1067 aa18.32■□□□□ 0.52
LTBR-215ENST00000546296 ERCC4Q92889 916 aaPredicted RBP18.32■□□□□ 0.52
LTBR-215ENST00000546296 MRPL38Q96DV4 380 aaKnown RBP18.32■□□□□ 0.52
LTBR-215ENST00000546296 SAAL1Q96ER3 474 aa18.32■□□□□ 0.52
LTBR-215ENST00000546296 GSDMAQ96QA5 445 aa18.32■□□□□ 0.52
LTBR-215ENST00000546296 CBWD1Q9BRT8 395 aa18.32■□□□□ 0.52
LTBR-215ENST00000546296 SLC38A7Q9NVC3 462 aa18.32■□□□□ 0.52
LTBR-215ENST00000546296 CPSF3Q9UKF6 684 aaKnown RBP18.32■□□□□ 0.52
LTBR-215ENST00000546296 PCDHA5Q9Y5H7 936 aa18.32■□□□□ 0.52
LTBR-215ENST00000546296 CASTOR2A6NHX0 329 aa18.31■□□□□ 0.52
LTBR-215ENST00000546296 LACTBL1A8MY62 500 aa18.31■□□□□ 0.52
LTBR-215ENST00000546296 FAM189A1O60320 539 aa18.31■□□□□ 0.52
LTBR-215ENST00000546296 LDHAP00338 332 aaKnown RBP18.31■□□□□ 0.52
LTBR-215ENST00000546296 KCNE1P15382 129 aa18.31■□□□□ 0.52
LTBR-215ENST00000546296 POU3F3P20264 500 aaPredicted RBP18.31■□□□□ 0.52
LTBR-215ENST00000546296 UBE3AQ05086 875 aa18.31■□□□□ 0.52
LTBR-215ENST00000546296 CCDC85BQ15834 202 aaPredicted RBP18.31■□□□□ 0.52
LTBR-215ENST00000546296 ENOX2Q16206 610 aaKnown RBP18.31■□□□□ 0.52
LTBR-215ENST00000546296 XKR4Q5GH76 650 aa18.31■□□□□ 0.52
LTBR-215ENST00000546296 PPM1EQ8WY54 764 aa18.31■□□□□ 0.52
LTBR-215ENST00000546296 RABGGTAQ92696 567 aa18.31■□□□□ 0.52
LTBR-215ENST00000546296 IGSF21Q96ID5 467 aa18.31■□□□□ 0.52
LTBR-215ENST00000546296 PPP1R10Q96QC0 940 aaKnown RBP18.31■□□□□ 0.52
LTBR-215ENST00000546296 AGPAT3Q9NRZ7 376 aa18.31■□□□□ 0.52
LTBR-215ENST00000546296 CNTN3Q9P232 1028 aa18.31■□□□□ 0.52
LTBR-215ENST00000546296 TRANK1O15050 2925 aa18.3■□□□□ 0.52
LTBR-215ENST00000546296 GOLGA8IPA6NC78 632 aa18.3■□□□□ 0.52
LTBR-215ENST00000546296 GOLGA8JA6NMD2 632 aa18.3■□□□□ 0.52
LTBR-215ENST00000546296 KIAA0391O15091 583 aaKnown RBP18.3■□□□□ 0.52
LTBR-215ENST00000546296 TGFB1I1O43294 461 aa18.3■□□□□ 0.52
LTBR-215ENST00000546296 DNAJB1P25685 340 aa18.3■□□□□ 0.52
LTBR-215ENST00000546296 SNRPFP62306 86 aaKnown RBP18.3■□□□□ 0.52
LTBR-215ENST00000546296 SPAG1Q07617 926 aa18.3■□□□□ 0.52
LTBR-215ENST00000546296 CD302Q8IX05 232 aa18.3■□□□□ 0.52
LTBR-215ENST00000546296 GOLGA5Q8TBA6 731 aa18.3■□□□□ 0.52
LTBR-215ENST00000546296 KIF12Q96FN5 646 aa18.3■□□□□ 0.52
LTBR-215ENST00000546296 ZMAT2Q96NC0 199 aaKnown RBP18.3■□□□□ 0.52
LTBR-215ENST00000546296 LMBRD1Q9NUN5 540 aa18.3■□□□□ 0.52
LTBR-215ENST00000546296 CGNQ9P2M7 1197 aaKnown RBP18.3■□□□□ 0.52
LTBR-215ENST00000546296 MAPK8IP1Q9UQF2 711 aa18.3■□□□□ 0.52
LTBR-215ENST00000546296 LZTS1Q9Y250 596 aa18.3■□□□□ 0.52
LTBR-215ENST00000546296 TTC26A0AVF1 554 aa18.29■□□□□ 0.52
LTBR-215ENST00000546296 CLIC2O15247 247 aa18.29■□□□□ 0.52
LTBR-215ENST00000546296 MEFVO15553 781 aaPredicted RBP18.29■□□□□ 0.52
LTBR-215ENST00000546296 EXTL3O43909 919 aa18.29■□□□□ 0.52
LTBR-215ENST00000546296 TADA2AO75478 443 aa18.29■□□□□ 0.52
LTBR-215ENST00000546296 HSP90AA2PQ14568 343 aaPredicted RBP18.29■□□□□ 0.52
LTBR-215ENST00000546296 BMS1Q14692 1282 aaKnown RBP18.29■□□□□ 0.52
LTBR-215ENST00000546296 CAMK4Q16566 473 aa18.29■□□□□ 0.52
LTBR-215ENST00000546296 TMC7Q7Z402 723 aa18.29■□□□□ 0.52
LTBR-215ENST00000546296 TMEM173Q86WV6 379 aaPredicted RBP18.29■□□□□ 0.52
LTBR-215ENST00000546296 MAFAQ8NHW3 353 aaPredicted RBP18.29■□□□□ 0.52
LTBR-215ENST00000546296 BCL7CQ8WUZ0 217 aaPredicted RBP18.29■□□□□ 0.52
LTBR-215ENST00000546296 C18orf25Q96B23 403 aaPredicted RBP18.29■□□□□ 0.52
LTBR-215ENST00000546296 UROC1Q96N76 676 aa18.29■□□□□ 0.52
LTBR-215ENST00000546296 GTPBP4Q9BZE4 634 aaKnown RBP18.29■□□□□ 0.52
LTBR-215ENST00000546296 ENTPD7Q9NQZ7 604 aa18.29■□□□□ 0.52
LTBR-215ENST00000546296 TLR9Q9NR96 1032 aa18.29■□□□□ 0.52
LTBR-215ENST00000546296 HSPBP1Q9NZL4 362 aa18.29■□□□□ 0.52
LTBR-215ENST00000546296 CACNG4Q9UBN1 327 aa18.29■□□□□ 0.52
LTBR-215ENST00000546296 XPOTO43592 962 aaKnown RBP18.28■□□□□ 0.52
LTBR-215ENST00000546296 IL18RAPO95256 599 aa18.28■□□□□ 0.52
LTBR-215ENST00000546296 CA8P35219 290 aa18.28■□□□□ 0.52
LTBR-215ENST00000546296 CYP2J2P51589 502 aa18.28■□□□□ 0.52
LTBR-215ENST00000546296 POU5F1Q01860 360 aaKnown RBP18.28■□□□□ 0.52
LTBR-215ENST00000546296 NAB2Q15742 525 aa18.28■□□□□ 0.52
LTBR-215ENST00000546296 TIGD5Q53EQ6 642 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms