RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 EVI5O60447 810 aa17.37■□□□□ 0.37
PRPF40A-212ENST00000545856 HARSP12081 509 aaKnown RBP17.37■□□□□ 0.37
PRPF40A-212ENST00000545856 ITGA4P13612 1032 aa17.37■□□□□ 0.37
PRPF40A-212ENST00000545856 ACOT2P49753 483 aa17.37■□□□□ 0.37
PRPF40A-212ENST00000545856 UBASH3AP57075 661 aa17.37■□□□□ 0.37
PRPF40A-212ENST00000545856 IKBKEQ14164 716 aa17.37■□□□□ 0.37
PRPF40A-212ENST00000545856 CACTINQ8WUQ7 758 aaKnown RBP17.37■□□□□ 0.37
PRPF40A-212ENST00000545856 TRIM43Q96BQ3 446 aaPredicted RBP17.37■□□□□ 0.37
PRPF40A-212ENST00000545856 SNX27Q96L92 541 aa17.37■□□□□ 0.37
PRPF40A-212ENST00000545856 EIF2AQ9BY44 585 aaKnown RBP17.37■□□□□ 0.37
PRPF40A-212ENST00000545856 IL23AQ9NPF7 189 aa17.37■□□□□ 0.37
PRPF40A-212ENST00000545856 RTN4Q9NQC3 1192 aaKnown RBP17.37■□□□□ 0.37
PRPF40A-212ENST00000545856 TMEM161AQ9NX61 479 aa17.37■□□□□ 0.37
PRPF40A-212ENST00000545856 CNTN3Q9P232 1028 aa17.37■□□□□ 0.37
PRPF40A-212ENST00000545856 CARNS1A5YM72 827 aa17.36■□□□□ 0.37
PRPF40A-212ENST00000545856 GOLGA8IPA6NC78 632 aa17.36■□□□□ 0.37
PRPF40A-212ENST00000545856 CCDC85CA6NKD9 419 aa17.36■□□□□ 0.37
PRPF40A-212ENST00000545856 GOLGA8JA6NMD2 632 aa17.36■□□□□ 0.37
PRPF40A-212ENST00000545856 KCNE1P15382 129 aa17.36■□□□□ 0.37
PRPF40A-212ENST00000545856 CCL23P55773 120 aa17.36■□□□□ 0.37
PRPF40A-212ENST00000545856 KCNH2Q12809 1159 aa17.36■□□□□ 0.37
PRPF40A-212ENST00000545856 KRT39Q6A163 491 aa17.36■□□□□ 0.37
PRPF40A-212ENST00000545856 PSRC1Q6PGN9 363 aaPredicted RBP17.36■□□□□ 0.37
PRPF40A-212ENST00000545856 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.36■□□□□ 0.37
PRPF40A-212ENST00000545856 ZNF598Q86UK7 904 aaKnown RBP17.36■□□□□ 0.37
PRPF40A-212ENST00000545856 SMG8Q8ND04 991 aaKnown RBP17.36■□□□□ 0.37
PRPF40A-212ENST00000545856 SCLYQ96I15 445 aa17.36■□□□□ 0.37
PRPF40A-212ENST00000545856 TMEM8AQ9HCN3 771 aa17.36■□□□□ 0.37
PRPF40A-212ENST00000545856 SLC38A7Q9NVC3 462 aa17.36■□□□□ 0.37
PRPF40A-212ENST00000545856 USP20Q9Y2K6 914 aa17.36■□□□□ 0.37
PRPF40A-212ENST00000545856 NR2E3Q9Y5X4 410 aa17.36■□□□□ 0.37
PRPF40A-212ENST00000545856 CEP290O15078 2479 aa17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 RECQL4O94761 1208 aa17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 CYP3A5P20815 502 aa17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 PAX3P23760 479 aa17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 MXI1P50539 228 aa17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 FPGSQ05932 587 aa17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 DUOXA2Q1HG44 320 aa17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 SLC10A6Q3KNW5 377 aa17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 DCAF17Q5H9S7 520 aaPredicted RBP17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 MIIPQ5JXC2 388 aa17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 TCERG1LQ5VWI1 586 aa17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 ALKAL1Q6UXT8 129 aa17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 CDR2LQ86X02 465 aaPredicted RBP17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 ECHDC2Q86YB7 292 aa17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 CEP120Q8N960 986 aa17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 EEF2KMTQ96G04 330 aa17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 FAXDC2Q96IV6 333 aa17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 FAM81BQ96LP2 452 aa17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 ERGIC2Q96RQ1 377 aa17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 TRIM5Q9C035 493 aa17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 NXF3Q9H4D5 531 aaKnown RBP17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 SNTG2Q9NY99 539 aa17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 COQ4Q9Y3A0 265 aa17.35■□□□□ 0.37
PRPF40A-212ENST00000545856 MGEA5O60502 916 aa17.34■□□□□ 0.37
PRPF40A-212ENST00000545856 CXCL8P10145 99 aa17.34■□□□□ 0.37
PRPF40A-212ENST00000545856 TNNI1P19237 187 aa17.34■□□□□ 0.37
PRPF40A-212ENST00000545856 RFX1P22670 979 aa17.34■□□□□ 0.37
PRPF40A-212ENST00000545856 CDC25BP30305 580 aa17.34■□□□□ 0.37
PRPF40A-212ENST00000545856 TNFSF9P41273 254 aa17.34■□□□□ 0.37
PRPF40A-212ENST00000545856 FMO5P49326 533 aa17.34■□□□□ 0.37
PRPF40A-212ENST00000545856 NR1I3Q14994 352 aa17.34■□□□□ 0.37
PRPF40A-212ENST00000545856 NPAS4Q8IUM7 802 aa17.34■□□□□ 0.37
PRPF40A-212ENST00000545856 RDH13Q8NBN7 331 aa17.34■□□□□ 0.37
PRPF40A-212ENST00000545856 ANKRD36BP1Q96IX9 119 aa17.34■□□□□ 0.37
PRPF40A-212ENST00000545856 MTIF3Q9H2K0 278 aaKnown RBP17.34■□□□□ 0.37
PRPF40A-212ENST00000545856 RSAD1Q9HA92 442 aa17.34■□□□□ 0.37
PRPF40A-212ENST00000545856 INTS13Q9NVM9 706 aa17.34■□□□□ 0.37
PRPF40A-212ENST00000545856 TAB2Q9NYJ8 693 aa17.34■□□□□ 0.37
PRPF40A-212ENST00000545856 KANSL3Q9P2N6 904 aa17.34■□□□□ 0.37
PRPF40A-212ENST00000545856 UBQLN1Q9UMX0 589 aaKnown RBP17.34■□□□□ 0.37
PRPF40A-212ENST00000545856 ITIH6Q6UXX5 1313 aa17.34■□□□□ 0.37
PRPF40A-212ENST00000545856 LRRIQ3A6PVS8 624 aaPredicted RBP17.33■□□□□ 0.36
PRPF40A-212ENST00000545856 ENPP3O14638 875 aa17.33■□□□□ 0.36
PRPF40A-212ENST00000545856 ZC3H11AO75152 810 aaKnown RBP eCLIP17.33■□□□□ 0.36
PRPF40A-212ENST00000545856 TNNC2P02585 160 aa17.33■□□□□ 0.36
PRPF40A-212ENST00000545856 TMEM132DQ14C87 1099 aa17.33■□□□□ 0.36
PRPF40A-212ENST00000545856 ZACNQ401N2 412 aa17.33■□□□□ 0.36
PRPF40A-212ENST00000545856 ZBTB41Q5SVQ8 909 aa17.33■□□□□ 0.36
PRPF40A-212ENST00000545856 C15orf39Q6ZRI6 1047 aa17.33■□□□□ 0.36
PRPF40A-212ENST00000545856 CREBRFQ8IUR6 639 aa17.33■□□□□ 0.36
PRPF40A-212ENST00000545856 C7orf61Q8IZ16 206 aa17.33■□□□□ 0.36
PRPF40A-212ENST00000545856 LINC01599Q8WXQ3 324 aa17.33■□□□□ 0.36
PRPF40A-212ENST00000545856 CCDC127Q96BQ5 260 aa17.33■□□□□ 0.36
PRPF40A-212ENST00000545856 RPS6KC1Q96S38 1066 aa17.33■□□□□ 0.36
PRPF40A-212ENST00000545856 MRPL9Q9BYD2 267 aaKnown RBP17.33■□□□□ 0.36
PRPF40A-212ENST00000545856 FAM124BQ9H5Z6 455 aaPredicted RBP17.33■□□□□ 0.36
PRPF40A-212ENST00000545856 IFNKQ9P0W0 207 aa17.33■□□□□ 0.36
PRPF40A-212ENST00000545856 FNDC1Q4ZHG4 1894 aaPredicted RBP17.33■□□□□ 0.36
PRPF40A-212ENST00000545856 TMEM191BP0C7N4 346 aa17.32■□□□□ 0.36
PRPF40A-212ENST00000545856 DLATP10515 647 aaKnown RBP17.32■□□□□ 0.36
PRPF40A-212ENST00000545856 CSF2RAP15509 400 aa17.32■□□□□ 0.36
PRPF40A-212ENST00000545856 ATF7P17544 494 aaPredicted RBP17.32■□□□□ 0.36
PRPF40A-212ENST00000545856 TRIM14Q14142 442 aa17.32■□□□□ 0.36
PRPF40A-212ENST00000545856 HSP90AA4PQ58FG1 418 aa17.32■□□□□ 0.36
PRPF40A-212ENST00000545856 FIGNQ5HY92 759 aa17.32■□□□□ 0.36
PRPF40A-212ENST00000545856 GLB1LQ6UWU2 654 aa17.32■□□□□ 0.36
PRPF40A-212ENST00000545856 GBP6Q6ZN66 633 aa17.32■□□□□ 0.36
PRPF40A-212ENST00000545856 RTN4RL1Q86UN2 441 aaPredicted RBP17.32■□□□□ 0.36
PRPF40A-212ENST00000545856 ZSWIM2Q8NEG5 633 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms